Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC38Q502W7 RNU6-37P-201ENST00000362692 107 ntBASIC3.19□□□□□ -1.9
CCDC38Q502W7 Y_RNA.167-201ENST00000363735 109 ntBASIC3.19□□□□□ -1.9
CCDC38Q502W7 RNU6-11P-201ENST00000364234 107 ntBASIC3.19□□□□□ -1.9
CCDC38Q502W7 RNU6-7-201ENST00000364784 107 ntBASIC3.19□□□□□ -1.9
CCDC38Q502W7 RNU5E-7P-201ENST00000365290 117 ntBASIC3.19□□□□□ -1.9
CCDC38Q502W7 RNU6-8-201ENST00000365467 107 ntBASIC3.19□□□□□ -1.9
CCDC38Q502W7 RNU6-25P-201ENST00000383873 107 ntBASIC3.19□□□□□ -1.9
CCDC38Q502W7 RNU6-1-201ENST00000383898 107 ntBASIC3.19□□□□□ -1.9
CCDC38Q502W7 RNU6-48P-201ENST00000384161 107 ntBASIC3.19□□□□□ -1.9
CCDC38Q502W7 RNU6-36P-201ENST00000384172 107 ntBASIC3.19□□□□□ -1.9
CCDC38Q502W7 RNU6-4P-201ENST00000384205 107 ntBASIC3.19□□□□□ -1.9
CCDC38Q502W7 RNU6-5P-201ENST00000384238 107 ntBASIC3.19□□□□□ -1.9
CCDC38Q502W7 RNU6-3P-201ENST00000384314 107 ntBASIC3.19□□□□□ -1.9
CCDC38Q502W7 RNU6-16P-201ENST00000384385 107 ntBASIC3.19□□□□□ -1.9
CCDC38Q502W7 RNU6-15P-201ENST00000384534 107 ntBASIC3.19□□□□□ -1.9
CCDC38Q502W7 RNU6-2-201ENST00000384627 107 ntBASIC3.19□□□□□ -1.9
CCDC38Q502W7 RNU6-29P-201ENST00000384637 107 ntBASIC3.19□□□□□ -1.9
CCDC38Q502W7 RNU6-9-201ENST00000384776 107 ntBASIC3.19□□□□□ -1.9
CCDC38Q502W7 RNU6-33P-201ENST00000384793 107 ntBASIC3.19□□□□□ -1.9
CCDC38Q502W7 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC38Q502W7 HMGB1P31-201ENST00000437242 427 ntBASIC3.19□□□□□ -1.9
CCDC38Q502W7 AC004383.1-201ENST00000438135 289 ntBASIC3.19□□□□□ -1.9
CCDC38Q502W7 AL513043.1-201ENST00000439124 535 ntBASIC3.19□□□□□ -1.9
CCDC38Q502W7 AC087884.1-201ENST00000469738 328 ntBASIC3.19□□□□□ -1.9
CCDC38Q502W7 RPS27AP9-201ENST00000477681 438 ntBASIC3.19□□□□□ -1.9
CCDC38Q502W7 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC38Q502W7 TBCAP3-201ENST00000512475 312 ntBASIC3.19□□□□□ -1.9
CCDC38Q502W7 RNU5B-3P-201ENST00000516601 115 ntBASIC3.19□□□□□ -1.9
CCDC38Q502W7 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC38Q502W7 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC38Q502W7 RNU6-6P-201ENST00000606623 107 ntBASIC3.19□□□□□ -1.9
CCDC38Q502W7 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.19□□□□□ -1.9
CCDC38Q502W7 AC138627.2-201ENST00000624202 601 ntBASIC3.19□□□□□ -1.9
CCDC38Q502W7 MIR6733-201ENST00000635723 61 ntBASIC3.19□□□□□ -1.9
CCDC38Q502W7 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC38Q502W7 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.19□□□□□ -1.9
CCDC38Q502W7 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
CCDC38Q502W7 AL049781.1-201ENST00000623195 3585 ntBASIC3.18□□□□□ -1.9
CCDC38Q502W7 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC38Q502W7 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC38Q502W7 HAUS6P2-201ENST00000433254 2404 ntBASIC3.18□□□□□ -1.9
CCDC38Q502W7 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC38Q502W7 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CCDC38Q502W7 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC38Q502W7 RNU6-78P-201ENST00000362897 107 ntBASIC3.18□□□□□ -1.9
CCDC38Q502W7 U3.12-201ENST00000364498 214 ntBASIC3.18□□□□□ -1.9
CCDC38Q502W7 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC38Q502W7 RNU6-332P-201ENST00000391193 108 ntBASIC3.18□□□□□ -1.9
CCDC38Q502W7 EIF4E2P1-201ENST00000393781 255 ntBASIC3.18□□□□□ -1.9
CCDC38Q502W7 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.18□□□□□ -1.9
CCDC38Q502W7 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC38Q502W7 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC38Q502W7 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC38Q502W7 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC38Q502W7 RN7SKP43-201ENST00000516173 320 ntBASIC3.18□□□□□ -1.9
CCDC38Q502W7 SNORA31.6-201ENST00000516241 130 ntBASIC3.18□□□□□ -1.9
CCDC38Q502W7 AC109479.2-201ENST00000517842 174 ntBASIC3.18□□□□□ -1.9
CCDC38Q502W7 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC38Q502W7 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC38Q502W7 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC38Q502W7 RNU6-91P-201ENST00000607774 107 ntBASIC3.18□□□□□ -1.9
CCDC38Q502W7 MIR7515-201ENST00000637837 67 ntBASIC3.18□□□□□ -1.9
CCDC38Q502W7 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
CCDC38Q502W7 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC38Q502W7 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC38Q502W7 AC138393.1-203ENST00000327086 343 ntBASIC3.17□□□□□ -1.9
CCDC38Q502W7 RNU6-843P-201ENST00000384454 104 ntBASIC3.17□□□□□ -1.9
CCDC38Q502W7 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC38Q502W7 Y_RNA.615-201ENST00000410769 117 ntBASIC3.17□□□□□ -1.9
CCDC38Q502W7 SNORD56-201ENST00000413522 71 ntBASIC3.17□□□□□ -1.9
CCDC38Q502W7 AL513477.1-202ENST00000417061 214 ntBASIC3.17□□□□□ -1.9
CCDC38Q502W7 AC012308.1-201ENST00000451232 178 ntBASIC3.17□□□□□ -1.9
CCDC38Q502W7 RNU7-138P-201ENST00000459479 64 ntBASIC3.17□□□□□ -1.9
CCDC38Q502W7 AC008571.1-201ENST00000467232 300 ntBASIC3.17□□□□□ -1.9
CCDC38Q502W7 AC117503.1-201ENST00000472241 394 ntBASIC3.17□□□□□ -1.9
CCDC38Q502W7 RPL23AP45-201ENST00000476406 468 ntBASIC3.17□□□□□ -1.9
CCDC38Q502W7 AP004217.1-201ENST00000480579 346 ntBASIC3.17□□□□□ -1.9
CCDC38Q502W7 AC006445.1-201ENST00000491925 405 ntBASIC3.17□□□□□ -1.9
CCDC38Q502W7 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC38Q502W7 SNORA19.2-201ENST00000516013 114 ntBASIC3.17□□□□□ -1.9
CCDC38Q502W7 Y_RNA.665-201ENST00000516177 98 ntBASIC3.17□□□□□ -1.9
CCDC38Q502W7 RNU6-1069P-201ENST00000516612 133 ntBASIC3.17□□□□□ -1.9
CCDC38Q502W7 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC38Q502W7 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC38Q502W7 AC123912.5-201ENST00000605470 343 ntBASIC3.17□□□□□ -1.9
CCDC38Q502W7 ATP5A1P2-202ENST00000616464 443 ntBASIC3.17□□□□□ -1.9
CCDC38Q502W7 U4.7-201ENST00000638126 106 ntBASIC3.17□□□□□ -1.9
CCDC38Q502W7 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC38Q502W7 AC010329.5-201ENST00000623497 2174 ntBASIC3.17□□□□□ -1.9
CCDC38Q502W7 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC38Q502W7 MTND5P30-201ENST00000452896 1731 ntBASIC3.16□□□□□ -1.9
CCDC38Q502W7 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC38Q502W7 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CCDC38Q502W7 Y_RNA.157-201ENST00000363638 102 ntBASIC3.16□□□□□ -1.9
CCDC38Q502W7 Y_RNA.248-201ENST00000364501 109 ntBASIC3.16□□□□□ -1.9
CCDC38Q502W7 SNORD116-20-201ENST00000384529 92 ntBASIC3.16□□□□□ -1.9
CCDC38Q502W7 AL513475.1-201ENST00000406602 315 ntBASIC3.16□□□□□ -1.9
CCDC38Q502W7 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC38Q502W7 AC005326.1-201ENST00000429197 123 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms