Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 RNU4-62P-201ENST00000410125 130 ntBASIC1.96□□□□□ -2.1
SF3A2Q15428 RNA5SP338-201ENST00000410495 85 ntBASIC1.96□□□□□ -2.1
SF3A2Q15428 USP9YP6-201ENST00000413550 854 ntBASIC1.96□□□□□ -2.1
SF3A2Q15428 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.96□□□□□ -2.1
SF3A2Q15428 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.96□□□□□ -2.1
SF3A2Q15428 EIF4EP4-201ENST00000424916 578 ntBASIC1.96□□□□□ -2.1
SF3A2Q15428 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.96□□□□□ -2.1
SF3A2Q15428 AC027124.2-201ENST00000428249 105 ntBASIC1.96□□□□□ -2.1
SF3A2Q15428 MTND4P32-201ENST00000437189 1237 ntBASIC1.96□□□□□ -2.1
SF3A2Q15428 MTCYBP39-201ENST00000437562 491 ntBASIC1.96□□□□□ -2.1
SF3A2Q15428 MTND2P4-201ENST00000445034 1004 ntBASIC1.96□□□□□ -2.1
SF3A2Q15428 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.96□□□□□ -2.1
SF3A2Q15428 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.96□□□□□ -2.1
SF3A2Q15428 AC025033.1-201ENST00000463883 194 ntBASIC1.96□□□□□ -2.1
SF3A2Q15428 AC090515.1-201ENST00000465295 476 ntBASIC1.96□□□□□ -2.1
SF3A2Q15428 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.96□□□□□ -2.1
SF3A2Q15428 SNORA25.15-201ENST00000516487 89 ntBASIC1.96□□□□□ -2.1
SF3A2Q15428 RNU7-193P-201ENST00000516723 65 ntBASIC1.96□□□□□ -2.1
SF3A2Q15428 AC009902.1-201ENST00000519351 183 ntBASIC1.96□□□□□ -2.1
SF3A2Q15428 AC107934.1-201ENST00000522215 217 ntBASIC1.96□□□□□ -2.1
SF3A2Q15428 MTND4LP18-201ENST00000526864 291 ntBASIC1.96□□□□□ -2.1
SF3A2Q15428 ARL2BPP2-201ENST00000550907 489 ntBASIC1.96□□□□□ -2.1
SF3A2Q15428 RPS3AP4-201ENST00000555161 764 ntBASIC1.96□□□□□ -2.1
SF3A2Q15428 ZNF519P3-201ENST00000557158 1032 ntBASIC1.96□□□□□ -2.1
SF3A2Q15428 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.96□□□□□ -2.1
SF3A2Q15428 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
SF3A2Q15428 SNRPGP19-201ENST00000603826 189 ntBASIC1.96□□□□□ -2.1
SF3A2Q15428 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.96□□□□□ -2.1
SF3A2Q15428 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
SF3A2Q15428 AC006338.1-201ENST00000618453 749 ntBASIC1.96□□□□□ -2.1
SF3A2Q15428 Z99571.1-201ENST00000636677 394 ntBASIC1.96□□□□□ -2.1
SF3A2Q15428 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SF3A2Q15428 ELL2P3-201ENST00000457883 1602 ntBASIC1.95□□□□□ -2.1
SF3A2Q15428 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.95□□□□□ -2.1
SF3A2Q15428 RNU6-500P-201ENST00000362349 107 ntBASIC1.95□□□□□ -2.1
SF3A2Q15428 RNU5F-6P-201ENST00000362979 116 ntBASIC1.95□□□□□ -2.1
SF3A2Q15428 RNU1-148P-201ENST00000384472 162 ntBASIC1.95□□□□□ -2.1
SF3A2Q15428 MIR518E-201ENST00000385252 88 ntBASIC1.95□□□□□ -2.1
SF3A2Q15428 FCF1P10-201ENST00000407590 479 ntBASIC1.95□□□□□ -2.1
SF3A2Q15428 SNORD23.1-201ENST00000408212 104 ntBASIC1.95□□□□□ -2.1
SF3A2Q15428 RNU2-36P-201ENST00000410361 191 ntBASIC1.95□□□□□ -2.1
SF3A2Q15428 ELOCP17-201ENST00000414751 326 ntBASIC1.95□□□□□ -2.1
SF3A2Q15428 AP1B1P2-201ENST00000416196 106 ntBASIC1.95□□□□□ -2.1
SF3A2Q15428 RAC1P6-201ENST00000423911 575 ntBASIC1.95□□□□□ -2.1
SF3A2Q15428 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.95□□□□□ -2.1
SF3A2Q15428 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.95□□□□□ -2.1
SF3A2Q15428 RPL37P21-201ENST00000435890 276 ntBASIC1.95□□□□□ -2.1
SF3A2Q15428 AC118469.1-201ENST00000442943 488 ntBASIC1.95□□□□□ -2.1
SF3A2Q15428 KATNBL1P3-201ENST00000443475 909 ntBASIC1.95□□□□□ -2.1
SF3A2Q15428 RPL23AP7-203ENST00000449021 469 ntBASIC1.95□□□□□ -2.1
SF3A2Q15428 AL021397.1-201ENST00000451806 248 ntBASIC1.95□□□□□ -2.1
SF3A2Q15428 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.95□□□□□ -2.1
SF3A2Q15428 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.95□□□□□ -2.1
SF3A2Q15428 AC011005.2-201ENST00000487324 359 ntBASIC1.95□□□□□ -2.1
SF3A2Q15428 RPL39P36-201ENST00000490784 156 ntBASIC1.95□□□□□ -2.1
SF3A2Q15428 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.95□□□□□ -2.1
SF3A2Q15428 AC084851.1-201ENST00000529105 249 ntBASIC1.95□□□□□ -2.1
SF3A2Q15428 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SF3A2Q15428 AP005136.1-201ENST00000579765 429 ntBASIC1.95□□□□□ -2.1
SF3A2Q15428 MIR3146-201ENST00000580367 79 ntBASIC1.95□□□□□ -2.1
SF3A2Q15428 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.95□□□□□ -2.1
SF3A2Q15428 MIR4448-201ENST00000584360 86 ntBASIC1.95□□□□□ -2.1
SF3A2Q15428 BNIP3P9-201ENST00000603714 553 ntBASIC1.95□□□□□ -2.1
SF3A2Q15428 APOOP1-201ENST00000604695 592 ntBASIC1.95□□□□□ -2.1
SF3A2Q15428 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.95□□□□□ -2.1
SF3A2Q15428 AC027807.2-201ENST00000616099 408 ntBASIC1.95□□□□□ -2.1
SF3A2Q15428 AL589994.2-201ENST00000621124 579 ntBASIC1.95□□□□□ -2.1
SF3A2Q15428 AC244517.12-201ENST00000623581 663 ntBASIC1.95□□□□□ -2.1
SF3A2Q15428 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.95□□□□□ -2.1
SF3A2Q15428 Z75746.1-201ENST00000440243 2080 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 CDC27P3-201ENST00000635418 1910 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 RNU6-898P-201ENST00000365627 104 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 SNORD116-9-201ENST00000384000 95 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 SNORD116-3-201ENST00000384287 95 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 SNORD116-7-201ENST00000384404 95 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 SNORD116-5-201ENST00000384462 95 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
SF3A2Q15428 RNU6-817P-201ENST00000391083 104 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 RPS12P24-201ENST00000412619 387 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.94□□□□□ -2.1
SF3A2Q15428 AL365184.2-201ENST00000431139 435 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.94□□□□□ -2.1
SF3A2Q15428 RPL22P17-201ENST00000438729 315 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 GPM6BP3-201ENST00000442797 145 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 BRK1P2-201ENST00000442875 223 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.94□□□□□ -2.1
SF3A2Q15428 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.94□□□□□ -2.1
SF3A2Q15428 MTND1P3-201ENST00000484956 952 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 RPS27P21-201ENST00000486977 252 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.94□□□□□ -2.1
SF3A2Q15428 AC008526.1-201ENST00000509149 338 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 AF213884.2-201ENST00000510417 903 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 MTCO3P28-201ENST00000513351 515 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.94□□□□□ -2.1
SF3A2Q15428 RNU6-572P-201ENST00000516724 80 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 RNA5SP364-201ENST00000516938 78 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 RNU6-143P-201ENST00000516942 93 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 ACA59.2-201ENST00000517061 156 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 AP003181.2-201ENST00000528941 181 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms