| NPRL3 | Q12980 | KATNBL1P3-201 | ENST00000443475 | 909 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC007879.3-202 | ENST00000448786 | 823 nt | TSL 1 (best) BASIC | 2.32 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC079448.1-201 | ENST00000449377 | 373 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AL365295.1-201 | ENST00000454942 | 514 nt | TSL 5 BASIC | 2.32 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC023794.1-201 | ENST00000504210 | 403 nt | TSL 2 BASIC | 2.32 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC020703.1-201 | ENST00000505051 | 521 nt | TSL 3 BASIC | 2.32 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | LINC02101-201 | ENST00000505861 | 725 nt | TSL 4 BASIC | 2.32 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC104806.1-201 | ENST00000508720 | 308 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | RNU7-193P-201 | ENST00000516723 | 65 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | SNORA48.11-201 | ENST00000517015 | 89 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC023866.1-201 | ENST00000518064 | 579 nt | TSL 4 BASIC | 2.32 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC069133.1-201 | ENST00000522857 | 566 nt | TSL 4 BASIC | 2.32 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AP000889.1-201 | ENST00000530968 | 660 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | LINC02305-201 | ENST00000554142 | 476 nt | TSL 3 BASIC | 2.32 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC105137.2-201 | ENST00000569073 | 466 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | RPS3AP23-202 | ENST00000574601 | 686 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | MIR3126-201 | ENST00000577443 | 74 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | RPL30P11-203 | ENST00000598995 | 310 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC119751.7-201 | ENST00000600494 | 245 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC109347.2-201 | ENST00000610220 | 349 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AP001486.3-201 | ENST00000615334 | 372 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | uc_338.15-201 | ENST00000615470 | 191 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC072046.2-201 | ENST00000618366 | 268 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | SMIM2-AS1-204 | ENST00000619472 | 746 nt | TSL 3 BASIC | 2.32 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC099842.1-201 | ENST00000619919 | 596 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | DENND4A-202 | ENST00000443035 | 8665 nt | TSL 1 (best) BASIC | 2.32 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | CEP57-213 | ENST00000541150 | 2911 nt | APPRIS ALT2 TSL 5 BASIC | 2.32 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | LIFR-201 | ENST00000263409 | 10089 nt | APPRIS P1 TSL 1 (best) BASIC | 2.32 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | LRIF1-203 | ENST00000494675 | 1912 nt | APPRIS ALT2 TSL 2 BASIC | 2.32 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC111000.4-202 | ENST00000505646 | 2648 nt | TSL 2 BASIC | 2.32 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | DDIAS-201 | ENST00000329143 | 3367 nt | APPRIS P2 TSL 1 (best) BASIC | 2.32 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | RGS18-201 | ENST00000367460 | 2150 nt | APPRIS P1 TSL 1 (best) BASIC | 2.32 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | RNU6-282P-201 | ENST00000365357 | 103 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | SNORA75-201 | ENST00000384158 | 137 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | MAMDC2-AS1-203 | ENST00000420573 | 339 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC006333.1-201 | ENST00000422401 | 410 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC133104.1-201 | ENST00000429100 | 218 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AL589986.2-201 | ENST00000429352 | 397 nt | TSL 2 BASIC | 2.31 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AL162725.2-201 | ENST00000430545 | 748 nt | TSL 5 BASIC | 2.31 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | PCYT1B-AS1-201 | ENST00000432626 | 275 nt | TSL 2 BASIC | 2.31 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC092839.1-201 | ENST00000433475 | 536 nt | TSL 4 BASIC | 2.31 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC078845.1-202 | ENST00000435996 | 733 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | RNU6-956P-201 | ENST00000458868 | 103 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC096725.1-201 | ENST00000514266 | 313 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC117532.1-201 | ENST00000514638 | 323 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | SNORD27.1-201 | ENST00000516319 | 72 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | OR5AL2P-201 | ENST00000532185 | 920 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC090023.1-201 | ENST00000545750 | 443 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AL136038.2-201 | ENST00000553983 | 283 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC009269.3-201 | ENST00000558429 | 472 nt | TSL 5 BASIC | 2.31 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | MYL12BP1-201 | ENST00000569826 | 507 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC022335.1-204 | ENST00000590779 | 600 nt | APPRIS ALT2 TSL 2 BASIC | 2.31 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC010620.1-201 | ENST00000601088 | 1102 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | RNASEH2B-AS1-206 | ENST00000601286 | 657 nt | TSL 5 BASIC | 2.31 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC092608.2-201 | ENST00000624427 | 218 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | CD44-239 | ENST00000639002 | 528 nt | TSL 1 (best) BASIC | 2.31 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | TMEM232-201 | ENST00000455884 | 2501 nt | APPRIS P2 TSL 2 BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC062016.1-201 | ENST00000355719 | 319 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | SNORD62.1-201 | ENST00000362541 | 86 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | RNU6-181P-201 | ENST00000363225 | 107 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | RNU6-622P-201 | ENST00000384272 | 103 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | Y_RNA.553-201 | ENST00000384670 | 102 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | MIR1-2-201 | ENST00000384961 | 85 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | MIR186-201 | ENST00000384988 | 86 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | MIR454-201 | ENST00000390180 | 115 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | RNU6-1140P-201 | ENST00000410517 | 106 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AL513008.1-201 | ENST00000412701 | 161 nt | TSL 5 BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | LINC01312-201 | ENST00000412745 | 775 nt | TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | OR6C66P-201 | ENST00000414917 | 930 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC008267.5-201 | ENST00000424928 | 265 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | INTS6L-AS1-201 | ENST00000430820 | 398 nt | TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | LINC00459-201 | ENST00000431656 | 376 nt | TSL 2 BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC069540.2-201 | ENST00000441776 | 351 nt | TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AP000936.1-201 | ENST00000442124 | 483 nt | TSL 5 BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC097460.1-201 | ENST00000514624 | 590 nt | TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | RNU1-86P-201 | ENST00000516108 | 154 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | RNU2-53P-201 | ENST00000516257 | 147 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | RNU1-107P-201 | ENST00000516617 | 154 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | SNORA43.2-201 | ENST00000516652 | 128 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | RNU6-445P-201 | ENST00000516949 | 107 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AP000873.5-201 | ENST00000533906 | 236 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC090049.1-201 | ENST00000551075 | 1011 nt | TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC087463.2-201 | ENST00000565943 | 472 nt | TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | MIR4775-201 | ENST00000581168 | 75 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | ZNF788-206 | ENST00000596883 | 692 nt | TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | NDUFA8P1-201 | ENST00000605525 | 367 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC098614.4-201 | ENST00000607601 | 462 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC006566.1-201 | ENST00000608943 | 513 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | MIR6895-201 | ENST00000613497 | 78 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | HOTAIRM1_5.1-201 | ENST00000619311 | 145 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC026585.1-201 | ENST00000619582 | 524 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC011155.2-201 | ENST00000623202 | 216 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | KCNIP4-207 | ENST00000509207 | 1301 nt | TSL 1 (best) BASIC | 2.3 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | RNA5SP456-201 | ENST00000364002 | 114 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | RNU6-116P-201 | ENST00000384042 | 109 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | FGFR1OP2P1-201 | ENST00000395943 | 500 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | RNA5SP390-201 | ENST00000410191 | 113 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC000123.1-201 | ENST00000418215 | 516 nt | TSL 5 BASIC | 2.29 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | LINC02336-201 | ENST00000434117 | 330 nt | TSL 3 BASIC | 2.29 | □□□□□ -2.04 | | |
| NPRL3 | Q12980 | AC099566.1-201 | ENST00000442558 | 479 nt | TSL 3 BASIC | 2.29 | □□□□□ -2.04 | | |