Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.04□□□□□ -2.24
H3F3AP84243 MTCO1P56-201ENST00000401674 224 ntBASIC1.04□□□□□ -2.24
H3F3AP84243 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.04□□□□□ -2.24
H3F3AP84243 AL353718.1-201ENST00000451028 517 ntBASIC1.04□□□□□ -2.24
H3F3AP84243 AL163540.1-201ENST00000485382 386 ntBASIC1.04□□□□□ -2.24
H3F3AP84243 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.04□□□□□ -2.24
H3F3AP84243 RPF2P2-201ENST00000504693 896 ntBASIC1.04□□□□□ -2.24
H3F3AP84243 SNORA31.3-201ENST00000516029 96 ntBASIC1.04□□□□□ -2.24
H3F3AP84243 AC021451.1-201ENST00000523498 1129 ntBASIC1.04□□□□□ -2.24
H3F3AP84243 AP004247.1-201ENST00000531556 1289 ntBASIC1.04□□□□□ -2.24
H3F3AP84243 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.04□□□□□ -2.24
H3F3AP84243 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.04□□□□□ -2.24
H3F3AP84243 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.04□□□□□ -2.24
H3F3AP84243 AL359821.1-201ENST00000605519 182 ntBASIC1.04□□□□□ -2.24
H3F3AP84243 AL050343.2-201ENST00000607338 280 ntBASIC1.04□□□□□ -2.24
H3F3AP84243 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.04□□□□□ -2.24
H3F3AP84243 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.04□□□□□ -2.24
H3F3AP84243 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
H3F3AP84243 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.04□□□□□ -2.24
H3F3AP84243 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.04□□□□□ -2.24
H3F3AP84243 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
H3F3AP84243 RNU6-1010P-201ENST00000362757 107 ntBASIC1.03□□□□□ -2.24
H3F3AP84243 RNU6-23P-201ENST00000363283 107 ntBASIC1.03□□□□□ -2.24
H3F3AP84243 RNU6-853P-201ENST00000364306 107 ntBASIC1.03□□□□□ -2.24
H3F3AP84243 RNU4-91P-201ENST00000364778 135 ntBASIC1.03□□□□□ -2.24
H3F3AP84243 SNORA25.8-201ENST00000364831 128 ntBASIC1.03□□□□□ -2.24
H3F3AP84243 RNU6-392P-201ENST00000364926 101 ntBASIC1.03□□□□□ -2.24
H3F3AP84243 Y_RNA.327-201ENST00000365201 102 ntBASIC1.03□□□□□ -2.24
H3F3AP84243 Y_RNA.408-201ENST00000383987 102 ntBASIC1.03□□□□□ -2.24
H3F3AP84243 AL603865.2-201ENST00000401679 213 ntBASIC1.03□□□□□ -2.24
H3F3AP84243 RPS12P24-201ENST00000412619 387 ntBASIC1.03□□□□□ -2.24
H3F3AP84243 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.03□□□□□ -2.24
H3F3AP84243 AL591704.2-201ENST00000421658 181 ntBASIC1.03□□□□□ -2.24
H3F3AP84243 RAC1P6-201ENST00000423911 575 ntBASIC1.03□□□□□ -2.24
H3F3AP84243 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.03□□□□□ -2.24
H3F3AP84243 AC092473.1-201ENST00000441098 221 ntBASIC1.03□□□□□ -2.24
H3F3AP84243 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.03□□□□□ -2.24
H3F3AP84243 AC245517.4-201ENST00000448601 281 ntBASIC1.03□□□□□ -2.24
H3F3AP84243 AC079448.1-201ENST00000449377 373 ntBASIC1.03□□□□□ -2.24
H3F3AP84243 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.03□□□□□ -2.24
H3F3AP84243 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.03□□□□□ -2.24
H3F3AP84243 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.03□□□□□ -2.24
H3F3AP84243 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.03□□□□□ -2.24
H3F3AP84243 AP001004.1-201ENST00000582468 324 ntBASIC1.03□□□□□ -2.24
H3F3AP84243 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC1.03□□□□□ -2.24
H3F3AP84243 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.03□□□□□ -2.24
H3F3AP84243 AL121890.5-201ENST00000620848 304 ntBASIC1.03□□□□□ -2.24
H3F3AP84243 AP000676.3-201ENST00000623299 569 ntBASIC1.03□□□□□ -2.24
H3F3AP84243 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.03□□□□□ -2.24
H3F3AP84243 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
H3F3AP84243 MIR1285-1-201ENST00000408593 84 ntBASIC1.02□□□□□ -2.25
H3F3AP84243 RPS15AP12-201ENST00000419498 388 ntBASIC1.02□□□□□ -2.25
H3F3AP84243 MTND4P25-201ENST00000441039 533 ntBASIC1.02□□□□□ -2.25
H3F3AP84243 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.02□□□□□ -2.25
H3F3AP84243 AL078601.1-201ENST00000444542 271 ntBASIC1.02□□□□□ -2.25
H3F3AP84243 AL096829.2-201ENST00000446582 742 ntBASIC1.02□□□□□ -2.25
H3F3AP84243 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.02□□□□□ -2.25
H3F3AP84243 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.02□□□□□ -2.25
H3F3AP84243 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.02□□□□□ -2.25
H3F3AP84243 RPL23AP35-201ENST00000451906 501 ntBASIC1.02□□□□□ -2.25
H3F3AP84243 MED28P2-201ENST00000475771 317 ntBASIC1.02□□□□□ -2.25
H3F3AP84243 AC010409.1-201ENST00000487382 476 ntBASIC1.02□□□□□ -2.25
H3F3AP84243 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
H3F3AP84243 RNU6-334P-201ENST00000517072 102 ntBASIC1.02□□□□□ -2.25
H3F3AP84243 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.02□□□□□ -2.25
H3F3AP84243 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.02□□□□□ -2.25
H3F3AP84243 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.02□□□□□ -2.25
H3F3AP84243 MTATP6P25-201ENST00000574491 261 ntBASIC1.02□□□□□ -2.25
H3F3AP84243 MIR3912-201ENST00000577566 105 ntBASIC1.02□□□□□ -2.25
H3F3AP84243 BNIP3P9-201ENST00000603714 553 ntBASIC1.02□□□□□ -2.25
H3F3AP84243 MIR8063-201ENST00000621930 81 ntBASIC1.02□□□□□ -2.25
H3F3AP84243 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
H3F3AP84243 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
H3F3AP84243 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.01□□□□□ -2.25
H3F3AP84243 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
H3F3AP84243 RNU6-655P-201ENST00000362858 107 ntBASIC1.01□□□□□ -2.25
H3F3AP84243 RNU6-414P-201ENST00000363705 104 ntBASIC1.01□□□□□ -2.25
H3F3AP84243 RNU6-944P-201ENST00000364023 107 ntBASIC1.01□□□□□ -2.25
H3F3AP84243 RNU6-609P-201ENST00000365459 107 ntBASIC1.01□□□□□ -2.25
H3F3AP84243 MIR1267-201ENST00000408723 78 ntBASIC1.01□□□□□ -2.25
H3F3AP84243 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.01□□□□□ -2.25
H3F3AP84243 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.01□□□□□ -2.25
H3F3AP84243 AC005094.1-201ENST00000440420 368 ntBASIC1.01□□□□□ -2.25
H3F3AP84243 MTCO1P44-201ENST00000441935 243 ntBASIC1.01□□□□□ -2.25
H3F3AP84243 AL035666.1-201ENST00000446195 348 ntBASIC1.01□□□□□ -2.25
H3F3AP84243 HMGN2P18-201ENST00000450680 270 ntBASIC1.01□□□□□ -2.25
H3F3AP84243 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.01□□□□□ -2.25
H3F3AP84243 RNU7-59P-201ENST00000459101 61 ntBASIC1.01□□□□□ -2.25
H3F3AP84243 RPS26P55-201ENST00000471178 356 ntBASIC1.01□□□□□ -2.25
H3F3AP84243 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.01□□□□□ -2.25
H3F3AP84243 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.01□□□□□ -2.25
H3F3AP84243 RPS3AP22-201ENST00000488297 769 ntBASIC1.01□□□□□ -2.25
H3F3AP84243 AC093852.1-201ENST00000503587 266 ntBASIC1.01□□□□□ -2.25
H3F3AP84243 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.01□□□□□ -2.25
H3F3AP84243 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.01□□□□□ -2.25
H3F3AP84243 DEFB131D-201ENST00000526803 184 ntBASIC1.01□□□□□ -2.25
H3F3AP84243 AC005668.1-201ENST00000571142 476 ntBASIC1.01□□□□□ -2.25
H3F3AP84243 AP001981.2-201ENST00000603241 418 ntBASIC1.01□□□□□ -2.25
H3F3AP84243 AC123912.5-201ENST00000605470 343 ntBASIC1.01□□□□□ -2.25
H3F3AP84243 MIR6078-201ENST00000611069 100 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms