Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 RN7SL517P-201ENST00000462240 305 ntBASIC5.05□□□□□ -1.6
USP46P62068 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC5.05□□□□□ -1.6
USP46P62068 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC5.05□□□□□ -1.6
USP46P62068 AC073073.1-201ENST00000493920 463 ntBASIC5.05□□□□□ -1.6
USP46P62068 RPS27P26-201ENST00000494583 239 ntBASIC5.05□□□□□ -1.6
USP46P62068 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC5.05□□□□□ -1.6
USP46P62068 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC5.05□□□□□ -1.6
USP46P62068 RNU6-1007P-201ENST00000516586 107 ntBASIC5.05□□□□□ -1.6
USP46P62068 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.05□□□□□ -1.6
USP46P62068 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.05□□□□□ -1.6
USP46P62068 AC005868.1-201ENST00000536421 331 ntBASIC5.05□□□□□ -1.6
USP46P62068 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.05□□□□□ -1.6
USP46P62068 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.05□□□□□ -1.6
USP46P62068 MIR5699-201ENST00000578903 90 ntBASIC5.05□□□□□ -1.6
USP46P62068 AC011603.4-201ENST00000611325 277 ntBASIC5.05□□□□□ -1.6
USP46P62068 AC013791.1-201ENST00000616619 62 ntBASIC5.05□□□□□ -1.6
USP46P62068 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC5.05□□□□□ -1.6
USP46P62068 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
USP46P62068 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.05□□□□□ -1.6
USP46P62068 TLK1P1-201ENST00000456760 2440 ntBASIC5.05□□□□□ -1.6
USP46P62068 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
USP46P62068 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
USP46P62068 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
USP46P62068 AF127577.6-201ENST00000623352 2191 ntBASIC5.04□□□□□ -1.6
USP46P62068 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
USP46P62068 RNU1-62P-201ENST00000362599 164 ntBASIC5.04□□□□□ -1.6
USP46P62068 Y_RNA.337-201ENST00000365312 102 ntBASIC5.04□□□□□ -1.6
USP46P62068 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
USP46P62068 SNORA18.3-201ENST00000384122 132 ntBASIC5.04□□□□□ -1.6
USP46P62068 SNORA8.3-201ENST00000384679 139 ntBASIC5.04□□□□□ -1.6
USP46P62068 U3.22-201ENST00000391120 215 ntBASIC5.04□□□□□ -1.6
USP46P62068 EI24P2-201ENST00000397776 1076 ntBASIC5.04□□□□□ -1.6
USP46P62068 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC5.04□□□□□ -1.6
USP46P62068 PPIAP31-201ENST00000405422 495 ntBASIC5.04□□□□□ -1.6
USP46P62068 RPS16P5-201ENST00000406501 404 ntBASIC5.04□□□□□ -1.6
USP46P62068 AC006461.1-201ENST00000412637 326 ntBASIC5.04□□□□□ -1.6
USP46P62068 AC010154.1-201ENST00000425857 269 ntBASIC5.04□□□□□ -1.6
USP46P62068 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.04□□□□□ -1.6
USP46P62068 RN7SL354P-201ENST00000469282 294 ntBASIC5.04□□□□□ -1.6
USP46P62068 RPS4XP13-201ENST00000483219 789 ntBASIC5.04□□□□□ -1.6
USP46P62068 RPS27AP10-201ENST00000496103 208 ntBASIC5.04□□□□□ -1.6
USP46P62068 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.04□□□□□ -1.6
USP46P62068 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.04□□□□□ -1.6
USP46P62068 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.04□□□□□ -1.6
USP46P62068 RNU2-12P-201ENST00000517216 168 ntBASIC5.04□□□□□ -1.6
USP46P62068 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.04□□□□□ -1.6
USP46P62068 AC112693.2-201ENST00000556538 232 ntBASIC5.04□□□□□ -1.6
USP46P62068 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC5.04□□□□□ -1.6
USP46P62068 SNORA74C-1-201ENST00000580726 201 ntBASIC5.04□□□□□ -1.6
USP46P62068 AC015914.2-201ENST00000618167 288 ntBASIC5.04□□□□□ -1.6
USP46P62068 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.04□□□□□ -1.6
USP46P62068 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
USP46P62068 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.04□□□□□ -1.6
USP46P62068 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
USP46P62068 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
USP46P62068 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
USP46P62068 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.03□□□□□ -1.6
USP46P62068 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.03□□□□□ -1.6
USP46P62068 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC5.03□□□□□ -1.6
USP46P62068 AL022322.2-201ENST00000624072 20397 ntBASIC5.03□□□□□ -1.6
USP46P62068 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
USP46P62068 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
USP46P62068 Y_RNA.287-201ENST00000364853 94 ntBASIC5.03□□□□□ -1.6
USP46P62068 RNU1-82P-201ENST00000390851 165 ntBASIC5.03□□□□□ -1.6
USP46P62068 NDUFS5P4-201ENST00000412983 318 ntBASIC5.03□□□□□ -1.6
USP46P62068 AC099548.1-201ENST00000421443 426 ntBASIC5.03□□□□□ -1.6
USP46P62068 TBCAP1-201ENST00000436520 327 ntBASIC5.03□□□□□ -1.6
USP46P62068 RPS29P20-201ENST00000489592 171 ntBASIC5.03□□□□□ -1.6
USP46P62068 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC5.03□□□□□ -1.6
USP46P62068 RNU6-709P-201ENST00000517257 104 ntBASIC5.03□□□□□ -1.6
USP46P62068 IGKV1-32-201ENST00000519290 311 ntBASIC5.03□□□□□ -1.6
USP46P62068 AC136628.3-201ENST00000521868 290 ntBASIC5.03□□□□□ -1.6
USP46P62068 AC109810.1-201ENST00000534066 224 ntBASIC5.03□□□□□ -1.6
USP46P62068 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.03□□□□□ -1.6
USP46P62068 POC1B-211ENST00000549504 581 ntTSL 5 BASIC5.03□□□□□ -1.6
USP46P62068 SNRPGP20-201ENST00000604477 205 ntBASIC5.03□□□□□ -1.6
USP46P62068 AL078604.3-201ENST00000615580 211 ntBASIC5.03□□□□□ -1.6
USP46P62068 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.03□□□□□ -1.6
USP46P62068 TUG1_4.1-201ENST00000619464 181 ntBASIC5.03□□□□□ -1.6
USP46P62068 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
USP46P62068 ADAM3A-203ENST00000461344 2157 ntBASIC5.03□□□□□ -1.6
USP46P62068 AC010329.5-201ENST00000623497 2174 ntBASIC5.03□□□□□ -1.6
USP46P62068 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.03□□□□□ -1.6
USP46P62068 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.03□□□□□ -1.6
USP46P62068 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.03□□□□□ -1.6
USP46P62068 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.03□□□□□ -1.6
USP46P62068 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
USP46P62068 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
USP46P62068 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
USP46P62068 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
USP46P62068 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.02□□□□□ -1.61
USP46P62068 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
USP46P62068 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
USP46P62068 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.02□□□□□ -1.61
USP46P62068 Y_RNA.24-201ENST00000362508 103 ntBASIC5.02□□□□□ -1.61
USP46P62068 Y_RNA.415-201ENST00000384012 112 ntBASIC5.02□□□□□ -1.61
USP46P62068 Y_RNA.572-201ENST00000384757 98 ntBASIC5.02□□□□□ -1.61
USP46P62068 U3.26-201ENST00000391236 204 ntBASIC5.02□□□□□ -1.61
USP46P62068 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.02□□□□□ -1.61
USP46P62068 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms