Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 MIR622-201ENST00000638396 96 ntBASIC2.84□□□□□ -1.95
RPS3AP61247 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
RPS3AP61247 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
RPS3AP61247 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.83□□□□□ -1.96
RPS3AP61247 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.83□□□□□ -1.96
RPS3AP61247 RNU6-78P-201ENST00000362897 107 ntBASIC2.83□□□□□ -1.96
RPS3AP61247 RNU6-486P-201ENST00000363116 107 ntBASIC2.83□□□□□ -1.96
RPS3AP61247 RNY4P14-201ENST00000363656 96 ntBASIC2.83□□□□□ -1.96
RPS3AP61247 SNORD56.5-201ENST00000364281 72 ntBASIC2.83□□□□□ -1.96
RPS3AP61247 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
RPS3AP61247 SNORA9-201ENST00000384215 133 ntBASIC2.83□□□□□ -1.96
RPS3AP61247 SNORA7.4-201ENST00000384249 137 ntBASIC2.83□□□□□ -1.96
RPS3AP61247 SNORD116-20-201ENST00000384529 92 ntBASIC2.83□□□□□ -1.96
RPS3AP61247 Y_RNA.554-201ENST00000384672 102 ntBASIC2.83□□□□□ -1.96
RPS3AP61247 RPL21P75-201ENST00000396599 483 ntBASIC2.83□□□□□ -1.96
RPS3AP61247 RPL21P28-201ENST00000401418 483 ntBASIC2.83□□□□□ -1.96
RPS3AP61247 RNU6-1068P-201ENST00000410958 103 ntBASIC2.83□□□□□ -1.96
RPS3AP61247 AF274854.1-201ENST00000413236 615 ntBASIC2.83□□□□□ -1.96
RPS3AP61247 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.83□□□□□ -1.96
RPS3AP61247 AL096701.2-201ENST00000416920 238 ntBASIC2.83□□□□□ -1.96
RPS3AP61247 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.83□□□□□ -1.96
RPS3AP61247 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.83□□□□□ -1.96
RPS3AP61247 RPS12P18-201ENST00000442381 270 ntBASIC2.83□□□□□ -1.96
RPS3AP61247 AL671855.1-201ENST00000446875 1203 ntBASIC2.83□□□□□ -1.96
RPS3AP61247 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.83□□□□□ -1.96
RPS3AP61247 RPL21P39-201ENST00000463605 483 ntBASIC2.83□□□□□ -1.96
RPS3AP61247 RPL7P43-201ENST00000478876 753 ntBASIC2.83□□□□□ -1.96
RPS3AP61247 RPL21P93-201ENST00000480465 489 ntBASIC2.83□□□□□ -1.96
RPS3AP61247 AC087190.1-201ENST00000484462 480 ntBASIC2.83□□□□□ -1.96
RPS3AP61247 AC093591.1-201ENST00000491435 481 ntBASIC2.83□□□□□ -1.96
RPS3AP61247 RPL21P16-201ENST00000495531 483 ntBASIC2.83□□□□□ -1.96
RPS3AP61247 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RPS3AP61247 CYCSP27-201ENST00000527643 293 ntBASIC2.83□□□□□ -1.96
RPS3AP61247 AP002404.1-201ENST00000532005 451 ntBASIC2.83□□□□□ -1.96
RPS3AP61247 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.83□□□□□ -1.96
RPS3AP61247 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.83□□□□□ -1.96
RPS3AP61247 AC023050.3-201ENST00000541142 333 ntBASIC2.83□□□□□ -1.96
RPS3AP61247 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.83□□□□□ -1.96
RPS3AP61247 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.83□□□□□ -1.96
RPS3AP61247 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.83□□□□□ -1.96
RPS3AP61247 AC080078.2-201ENST00000603766 501 ntBASIC2.83□□□□□ -1.96
RPS3AP61247 AC096772.1-201ENST00000609146 564 ntBASIC2.83□□□□□ -1.96
RPS3AP61247 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RPS3AP61247 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RPS3AP61247 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.83□□□□□ -1.96
RPS3AP61247 AC080128.1-201ENST00000474389 1917 ntBASIC2.82□□□□□ -1.96
RPS3AP61247 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.82□□□□□ -1.96
RPS3AP61247 RNU4-20P-201ENST00000365601 151 ntBASIC2.82□□□□□ -1.96
RPS3AP61247 Y_RNA.599-201ENST00000410489 109 ntBASIC2.82□□□□□ -1.96
RPS3AP61247 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.82□□□□□ -1.96
RPS3AP61247 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.82□□□□□ -1.96
RPS3AP61247 RPLP0P7-201ENST00000416050 667 ntBASIC2.82□□□□□ -1.96
RPS3AP61247 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.82□□□□□ -1.96
RPS3AP61247 MTND3P16-201ENST00000452205 344 ntBASIC2.82□□□□□ -1.96
RPS3AP61247 AC008571.1-201ENST00000467232 300 ntBASIC2.82□□□□□ -1.96
RPS3AP61247 RPL21P99-201ENST00000480369 423 ntBASIC2.82□□□□□ -1.96
RPS3AP61247 RPL36AP48-201ENST00000485521 314 ntBASIC2.82□□□□□ -1.96
RPS3AP61247 HIGD1AP13-201ENST00000509878 289 ntBASIC2.82□□□□□ -1.96
RPS3AP61247 RNU6-189P-201ENST00000516120 101 ntBASIC2.82□□□□□ -1.96
RPS3AP61247 SNORA74D-201ENST00000516404 141 ntBASIC2.82□□□□□ -1.96
RPS3AP61247 SCARNA3-201ENST00000517097 143 ntBASIC2.82□□□□□ -1.96
RPS3AP61247 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.82□□□□□ -1.96
RPS3AP61247 AP003033.1-201ENST00000527244 415 ntBASIC2.82□□□□□ -1.96
RPS3AP61247 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.82□□□□□ -1.96
RPS3AP61247 AC136619.2-201ENST00000563361 631 ntBASIC2.82□□□□□ -1.96
RPS3AP61247 MIR3117-201ENST00000584034 78 ntBASIC2.82□□□□□ -1.96
RPS3AP61247 AL356280.1-201ENST00000603614 379 ntBASIC2.82□□□□□ -1.96
RPS3AP61247 AL162274.2-201ENST00000614406 332 ntBASIC2.82□□□□□ -1.96
RPS3AP61247 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.82□□□□□ -1.96
RPS3AP61247 AC244517.12-201ENST00000623581 663 ntBASIC2.82□□□□□ -1.96
RPS3AP61247 AC073869.6-201ENST00000640656 341 ntBASIC2.82□□□□□ -1.96
RPS3AP61247 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.82□□□□□ -1.96
RPS3AP61247 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.82□□□□□ -1.96
RPS3AP61247 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.82□□□□□ -1.96
RPS3AP61247 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
RPS3AP61247 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
RPS3AP61247 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
RPS3AP61247 RNU6-37P-201ENST00000362692 107 ntBASIC2.81□□□□□ -1.96
RPS3AP61247 RNA5SP374-201ENST00000362939 125 ntBASIC2.81□□□□□ -1.96
RPS3AP61247 RNY3P3-201ENST00000363816 102 ntBASIC2.81□□□□□ -1.96
RPS3AP61247 RNU6-11P-201ENST00000364234 107 ntBASIC2.81□□□□□ -1.96
RPS3AP61247 RNU6-7-201ENST00000364784 107 ntBASIC2.81□□□□□ -1.96
RPS3AP61247 RNU6-8-201ENST00000365467 107 ntBASIC2.81□□□□□ -1.96
RPS3AP61247 RNU6-25P-201ENST00000383873 107 ntBASIC2.81□□□□□ -1.96
RPS3AP61247 RNU6-1-201ENST00000383898 107 ntBASIC2.81□□□□□ -1.96
RPS3AP61247 RNU6-48P-201ENST00000384161 107 ntBASIC2.81□□□□□ -1.96
RPS3AP61247 RNU6-36P-201ENST00000384172 107 ntBASIC2.81□□□□□ -1.96
RPS3AP61247 Y_RNA.450-201ENST00000384198 113 ntBASIC2.81□□□□□ -1.96
RPS3AP61247 RNU6-4P-201ENST00000384205 107 ntBASIC2.81□□□□□ -1.96
RPS3AP61247 RNU6-5P-201ENST00000384238 107 ntBASIC2.81□□□□□ -1.96
RPS3AP61247 RNU6-3P-201ENST00000384314 107 ntBASIC2.81□□□□□ -1.96
RPS3AP61247 RNU6-16P-201ENST00000384385 107 ntBASIC2.81□□□□□ -1.96
RPS3AP61247 RNU6-15P-201ENST00000384534 107 ntBASIC2.81□□□□□ -1.96
RPS3AP61247 RNU6-2-201ENST00000384627 107 ntBASIC2.81□□□□□ -1.96
RPS3AP61247 RNU6-29P-201ENST00000384637 107 ntBASIC2.81□□□□□ -1.96
RPS3AP61247 RNU6-9-201ENST00000384776 107 ntBASIC2.81□□□□□ -1.96
RPS3AP61247 RNU6-33P-201ENST00000384793 107 ntBASIC2.81□□□□□ -1.96
RPS3AP61247 MIR514A2-201ENST00000385131 88 ntBASIC2.81□□□□□ -1.96
RPS3AP61247 MIR514A3-201ENST00000385132 88 ntBASIC2.81□□□□□ -1.96
RPS3AP61247 RNA5SP219-201ENST00000390940 113 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms