Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 SNRPEP3-201ENST00000338402 276 ntBASIC0.58□□□□□ -2.32
CKS1BP61024 RNU6-944P-201ENST00000364023 107 ntBASIC0.58□□□□□ -2.32
CKS1BP61024 RNU6-188P-201ENST00000364207 107 ntBASIC0.58□□□□□ -2.32
CKS1BP61024 SNORA17.3-201ENST00000391159 129 ntBASIC0.58□□□□□ -2.32
CKS1BP61024 AL161935.2-201ENST00000414627 60 ntBASIC0.58□□□□□ -2.32
CKS1BP61024 AP1B1P2-201ENST00000416196 106 ntBASIC0.58□□□□□ -2.32
CKS1BP61024 AC009518.2-201ENST00000418056 731 ntBASIC0.58□□□□□ -2.32
CKS1BP61024 AC138623.1-201ENST00000418060 216 ntBASIC0.58□□□□□ -2.32
CKS1BP61024 VN1R42P-201ENST00000424651 344 ntBASIC0.58□□□□□ -2.32
CKS1BP61024 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.58□□□□□ -2.32
CKS1BP61024 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC0.58□□□□□ -2.32
CKS1BP61024 HSPE1P13-201ENST00000451143 297 ntBASIC0.58□□□□□ -2.32
CKS1BP61024 RNU7-140P-201ENST00000459546 60 ntBASIC0.58□□□□□ -2.32
CKS1BP61024 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.58□□□□□ -2.32
CKS1BP61024 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.58□□□□□ -2.32
CKS1BP61024 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.58□□□□□ -2.32
CKS1BP61024 uc_338.15-201ENST00000615470 191 ntBASIC0.58□□□□□ -2.32
CKS1BP61024 MIR6866-201ENST00000638146 69 ntBASIC0.58□□□□□ -2.32
CKS1BP61024 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.58□□□□□ -2.32
CKS1BP61024 RNU6-288P-201ENST00000363690 104 ntBASIC0.57□□□□□ -2.32
CKS1BP61024 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.57□□□□□ -2.32
CKS1BP61024 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.57□□□□□ -2.32
CKS1BP61024 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.57□□□□□ -2.32
CKS1BP61024 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.57□□□□□ -2.32
CKS1BP61024 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.57□□□□□ -2.32
CKS1BP61024 AL669831.1-202ENST00000428504 417 ntBASIC0.57□□□□□ -2.32
CKS1BP61024 AC108667.1-201ENST00000428618 249 ntBASIC0.57□□□□□ -2.32
CKS1BP61024 RN7SL429P-201ENST00000479090 223 ntBASIC0.57□□□□□ -2.32
CKS1BP61024 RN7SL489P-201ENST00000486185 223 ntBASIC0.57□□□□□ -2.32
CKS1BP61024 RN7SL327P-201ENST00000488659 223 ntBASIC0.57□□□□□ -2.32
CKS1BP61024 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.57□□□□□ -2.32
CKS1BP61024 SNORA3.4-201ENST00000515969 96 ntBASIC0.57□□□□□ -2.32
CKS1BP61024 RNU6-965P-201ENST00000516721 96 ntBASIC0.57□□□□□ -2.32
CKS1BP61024 RN7SKP219-201ENST00000516825 296 ntBASIC0.57□□□□□ -2.32
CKS1BP61024 RN7SKP88-201ENST00000516847 250 ntBASIC0.57□□□□□ -2.32
CKS1BP61024 RNU6-1092P-201ENST00000516955 87 ntBASIC0.57□□□□□ -2.32
CKS1BP61024 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.57□□□□□ -2.32
CKS1BP61024 AC008088.1-201ENST00000580993 280 ntBASIC0.57□□□□□ -2.32
CKS1BP61024 AL353997.4-201ENST00000586196 166 ntBASIC0.57□□□□□ -2.32
CKS1BP61024 AC008945.2-201ENST00000606056 604 ntBASIC0.57□□□□□ -2.32
CKS1BP61024 AC093788.1-201ENST00000609356 927 ntBASIC0.57□□□□□ -2.32
CKS1BP61024 7SK.8-201ENST00000612110 250 ntBASIC0.57□□□□□ -2.32
CKS1BP61024 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.57□□□□□ -2.32
CKS1BP61024 7SK.11-201ENST00000615477 250 ntBASIC0.57□□□□□ -2.32
CKS1BP61024 RN7SL853P-201ENST00000617250 223 ntBASIC0.57□□□□□ -2.32
CKS1BP61024 7SK.13-201ENST00000622040 250 ntBASIC0.57□□□□□ -2.32
CKS1BP61024 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.56□□□□□ -2.32
CKS1BP61024 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
CKS1BP61024 Y_RNA.25-201ENST00000362528 102 ntBASIC0.56□□□□□ -2.32
CKS1BP61024 Y_RNA.140-201ENST00000363474 103 ntBASIC0.56□□□□□ -2.32
CKS1BP61024 RNU6-743P-201ENST00000364151 106 ntBASIC0.56□□□□□ -2.32
CKS1BP61024 RNU6-898P-201ENST00000365627 104 ntBASIC0.56□□□□□ -2.32
CKS1BP61024 RNU6-432P-201ENST00000384196 109 ntBASIC0.56□□□□□ -2.32
CKS1BP61024 MIR19B1-201ENST00000384829 87 ntBASIC0.56□□□□□ -2.32
CKS1BP61024 RN7SKP61-201ENST00000410642 295 ntBASIC0.56□□□□□ -2.32
CKS1BP61024 EBAG9P1-201ENST00000418955 543 ntBASIC0.56□□□□□ -2.32
CKS1BP61024 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.56□□□□□ -2.32
CKS1BP61024 SNX2P2-201ENST00000424553 323 ntBASIC0.56□□□□□ -2.32
CKS1BP61024 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.56□□□□□ -2.32
CKS1BP61024 AL365400.1-201ENST00000431854 640 ntBASIC0.56□□□□□ -2.32
CKS1BP61024 KATNBL1P3-201ENST00000443475 909 ntBASIC0.56□□□□□ -2.32
CKS1BP61024 BTF3P15-201ENST00000455606 336 ntBASIC0.56□□□□□ -2.32
CKS1BP61024 snoU13.23-201ENST00000458863 104 ntBASIC0.56□□□□□ -2.32
CKS1BP61024 AC130509.1-201ENST00000464158 433 ntBASIC0.56□□□□□ -2.32
CKS1BP61024 COX6CP14-201ENST00000469580 174 ntBASIC0.56□□□□□ -2.32
CKS1BP61024 AL163540.1-201ENST00000485382 386 ntBASIC0.56□□□□□ -2.32
CKS1BP61024 AC134050.1-201ENST00000495088 933 ntBASIC0.56□□□□□ -2.32
CKS1BP61024 TRBVA-201ENST00000498804 316 ntBASIC0.56□□□□□ -2.32
CKS1BP61024 AC114981.1-201ENST00000503897 678 ntBASIC0.56□□□□□ -2.32
CKS1BP61024 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.56□□□□□ -2.32
CKS1BP61024 RNU6-390P-201ENST00000516259 103 ntBASIC0.56□□□□□ -2.32
CKS1BP61024 RNU6-197P-201ENST00000516680 100 ntBASIC0.56□□□□□ -2.32
CKS1BP61024 RNU6-1261P-201ENST00000517194 104 ntBASIC0.56□□□□□ -2.32
CKS1BP61024 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC0.56□□□□□ -2.32
CKS1BP61024 CBX3P8-201ENST00000532412 525 ntBASIC0.56□□□□□ -2.32
CKS1BP61024 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC0.56□□□□□ -2.32
CKS1BP61024 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.56□□□□□ -2.32
CKS1BP61024 VN1R80P-201ENST00000597126 338 ntBASIC0.56□□□□□ -2.32
CKS1BP61024 AC112220.2-201ENST00000605513 533 ntBASIC0.56□□□□□ -2.32
CKS1BP61024 MIR6857-201ENST00000613267 93 ntBASIC0.56□□□□□ -2.32
CKS1BP61024 AL590240.4-201ENST00000616908 390 ntBASIC0.56□□□□□ -2.32
CKS1BP61024 AC095038.3-201ENST00000634439 195 ntBASIC0.56□□□□□ -2.32
CKS1BP61024 SNORA4.1-201ENST00000364263 144 ntBASIC0.55□□□□□ -2.32
CKS1BP61024 RNU6-549P-201ENST00000384433 107 ntBASIC0.55□□□□□ -2.32
CKS1BP61024 MIR608-201ENST00000384820 100 ntBASIC0.55□□□□□ -2.32
CKS1BP61024 MIR532-201ENST00000385025 91 ntBASIC0.55□□□□□ -2.32
CKS1BP61024 MIR29B2-201ENST00000385055 81 ntBASIC0.55□□□□□ -2.32
CKS1BP61024 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.55□□□□□ -2.32
CKS1BP61024 RNU6-733P-201ENST00000410759 104 ntBASIC0.55□□□□□ -2.32
CKS1BP61024 RPL21P111-201ENST00000418453 477 ntBASIC0.55□□□□□ -2.32
CKS1BP61024 MTND5P15-201ENST00000434246 349 ntBASIC0.55□□□□□ -2.32
CKS1BP61024 COX7BP2-201ENST00000437976 242 ntBASIC0.55□□□□□ -2.32
CKS1BP61024 HSPE1P9-201ENST00000440046 311 ntBASIC0.55□□□□□ -2.32
CKS1BP61024 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.55□□□□□ -2.32
CKS1BP61024 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.55□□□□□ -2.32
CKS1BP61024 RNU6-351P-201ENST00000516097 100 ntBASIC0.55□□□□□ -2.32
CKS1BP61024 RN7SKP258-201ENST00000517151 304 ntBASIC0.55□□□□□ -2.32
CKS1BP61024 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.55□□□□□ -2.32
CKS1BP61024 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.55□□□□□ -2.32
CKS1BP61024 AP005136.1-201ENST00000579765 429 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms