Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RHBDL3P58872 RPS4XP7-201ENST00000406274 780 ntBASIC3.36□□□□□ -1.87
RHBDL3P58872 BTF3P7-201ENST00000407097 488 ntBASIC3.36□□□□□ -1.87
RHBDL3P58872 RNU2-52P-201ENST00000410680 190 ntBASIC3.36□□□□□ -1.87
RHBDL3P58872 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.36□□□□□ -1.87
RHBDL3P58872 AC138623.1-201ENST00000418060 216 ntBASIC3.36□□□□□ -1.87
RHBDL3P58872 AC063976.3-201ENST00000426849 329 ntBASIC3.36□□□□□ -1.87
RHBDL3P58872 HMGB1P31-201ENST00000437242 427 ntBASIC3.36□□□□□ -1.87
RHBDL3P58872 FDX1P2-201ENST00000450769 375 ntBASIC3.36□□□□□ -1.87
RHBDL3P58872 RNU7-167P-201ENST00000459160 62 ntBASIC3.36□□□□□ -1.87
RHBDL3P58872 RNU7-180P-201ENST00000459240 63 ntBASIC3.36□□□□□ -1.87
RHBDL3P58872 RN7SL283P-201ENST00000489055 303 ntBASIC3.36□□□□□ -1.87
RHBDL3P58872 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.36□□□□□ -1.87
RHBDL3P58872 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.36□□□□□ -1.87
RHBDL3P58872 AC027176.1-201ENST00000560204 514 ntBASIC3.36□□□□□ -1.87
RHBDL3P58872 AC105137.2-201ENST00000569073 466 ntBASIC3.36□□□□□ -1.87
RHBDL3P58872 RPS15AP11-201ENST00000594193 385 ntBASIC3.36□□□□□ -1.87
RHBDL3P58872 RMST_7.1-201ENST00000621935 268 ntBASIC3.36□□□□□ -1.87
RHBDL3P58872 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.36□□□□□ -1.87
RHBDL3P58872 RNU4-75P-201ENST00000364621 146 ntBASIC3.35□□□□□ -1.87
RHBDL3P58872 MIR218-1-201ENST00000384999 110 ntBASIC3.35□□□□□ -1.87
RHBDL3P58872 SNORA16.2-201ENST00000390991 127 ntBASIC3.35□□□□□ -1.87
RHBDL3P58872 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.35□□□□□ -1.87
RHBDL3P58872 UBE2V1P10-201ENST00000414685 269 ntBASIC3.35□□□□□ -1.87
RHBDL3P58872 RPL30P4-201ENST00000429309 333 ntBASIC3.35□□□□□ -1.87
RHBDL3P58872 AC104389.3-201ENST00000445629 235 ntBASIC3.35□□□□□ -1.87
RHBDL3P58872 SNORD109B-201ENST00000458961 67 ntBASIC3.35□□□□□ -1.87
RHBDL3P58872 SNORD109A-201ENST00000459128 67 ntBASIC3.35□□□□□ -1.87
RHBDL3P58872 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.35□□□□□ -1.87
RHBDL3P58872 RNU6-506P-201ENST00000516553 94 ntBASIC3.35□□□□□ -1.87
RHBDL3P58872 Y_RNA.693-201ENST00000516641 110 ntBASIC3.35□□□□□ -1.87
RHBDL3P58872 AC109329.1-201ENST00000518744 317 ntBASIC3.35□□□□□ -1.87
RHBDL3P58872 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.35□□□□□ -1.87
RHBDL3P58872 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.35□□□□□ -1.87
RHBDL3P58872 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.35□□□□□ -1.87
RHBDL3P58872 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.35□□□□□ -1.87
RHBDL3P58872 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.35□□□□□ -1.87
RHBDL3P58872 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RHBDL3P58872 RBBP8P1-201ENST00000449447 1844 ntBASIC3.35□□□□□ -1.87
RHBDL3P58872 AL354685.2-201ENST00000448218 1447 ntBASIC3.35□□□□□ -1.87
RHBDL3P58872 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
RHBDL3P58872 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.35□□□□□ -1.87
RHBDL3P58872 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.34□□□□□ -1.87
RHBDL3P58872 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
RHBDL3P58872 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.34□□□□□ -1.87
RHBDL3P58872 AC093010.3-201ENST00000570269 15214 ntBASIC3.34□□□□□ -1.87
RHBDL3P58872 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
RHBDL3P58872 RNU6-1010P-201ENST00000362757 107 ntBASIC3.34□□□□□ -1.87
RHBDL3P58872 RNU1-35P-201ENST00000362782 153 ntBASIC3.34□□□□□ -1.87
RHBDL3P58872 RNU6-805P-201ENST00000365643 106 ntBASIC3.34□□□□□ -1.87
RHBDL3P58872 SNORD116-4-201ENST00000384733 96 ntBASIC3.34□□□□□ -1.87
RHBDL3P58872 RNA5SP390-201ENST00000410191 113 ntBASIC3.34□□□□□ -1.87
RHBDL3P58872 RNA5SP293-201ENST00000410527 113 ntBASIC3.34□□□□□ -1.87
RHBDL3P58872 HMGN2P35-201ENST00000412164 270 ntBASIC3.34□□□□□ -1.87
RHBDL3P58872 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.34□□□□□ -1.87
RHBDL3P58872 ARL5AP1-201ENST00000418991 388 ntBASIC3.34□□□□□ -1.87
RHBDL3P58872 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.34□□□□□ -1.87
RHBDL3P58872 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.34□□□□□ -1.87
RHBDL3P58872 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.34□□□□□ -1.87
RHBDL3P58872 RPL7P12-201ENST00000446719 750 ntBASIC3.34□□□□□ -1.87
RHBDL3P58872 UQCRHP3-201ENST00000451503 251 ntBASIC3.34□□□□□ -1.87
RHBDL3P58872 CACYBPP2-201ENST00000453625 678 ntBASIC3.34□□□□□ -1.87
RHBDL3P58872 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.34□□□□□ -1.87
RHBDL3P58872 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.34□□□□□ -1.87
RHBDL3P58872 AC117503.1-201ENST00000472241 394 ntBASIC3.34□□□□□ -1.87
RHBDL3P58872 RN7SL429P-201ENST00000479090 223 ntBASIC3.34□□□□□ -1.87
RHBDL3P58872 AC103975.1-201ENST00000482506 483 ntBASIC3.34□□□□□ -1.87
RHBDL3P58872 RN7SL489P-201ENST00000486185 223 ntBASIC3.34□□□□□ -1.87
RHBDL3P58872 RN7SL327P-201ENST00000488659 223 ntBASIC3.34□□□□□ -1.87
RHBDL3P58872 AC091885.1-201ENST00000506658 268 ntBASIC3.34□□□□□ -1.87
RHBDL3P58872 MTCO3P9-201ENST00000506989 781 ntBASIC3.34□□□□□ -1.87
RHBDL3P58872 RNU4-29P-201ENST00000515943 174 ntBASIC3.34□□□□□ -1.87
RHBDL3P58872 RN7SKP43-201ENST00000516173 320 ntBASIC3.34□□□□□ -1.87
RHBDL3P58872 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.34□□□□□ -1.87
RHBDL3P58872 AC010186.2-204ENST00000537668 439 ntBASIC3.34□□□□□ -1.87
RHBDL3P58872 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.34□□□□□ -1.87
RHBDL3P58872 AL512360.1-201ENST00000555346 234 ntBASIC3.34□□□□□ -1.87
RHBDL3P58872 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.34□□□□□ -1.87
RHBDL3P58872 RN7SL853P-201ENST00000617250 223 ntBASIC3.34□□□□□ -1.87
RHBDL3P58872 AC024581.2-201ENST00000619986 252 ntBASIC3.34□□□□□ -1.87
RHBDL3P58872 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
RHBDL3P58872 AL136360.1-201ENST00000503377 1900 ntBASIC3.34□□□□□ -1.88
RHBDL3P58872 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
RHBDL3P58872 AC092593.1-201ENST00000515413 1815 ntBASIC3.33□□□□□ -1.88
RHBDL3P58872 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RHBDL3P58872 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RHBDL3P58872 RNU6-78P-201ENST00000362897 107 ntBASIC3.33□□□□□ -1.88
RHBDL3P58872 SNORA69-201ENST00000383895 132 ntBASIC3.33□□□□□ -1.88
RHBDL3P58872 Y_RNA.409-201ENST00000383990 98 ntBASIC3.33□□□□□ -1.88
RHBDL3P58872 MIR9-1-201ENST00000385198 89 ntBASIC3.33□□□□□ -1.88
RHBDL3P58872 RN7SKP58-201ENST00000411010 305 ntBASIC3.33□□□□□ -1.88
RHBDL3P58872 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.33□□□□□ -1.88
RHBDL3P58872 AC093151.1-201ENST00000427711 313 ntBASIC3.33□□□□□ -1.88
RHBDL3P58872 VN1R108P-201ENST00000431580 830 ntBASIC3.33□□□□□ -1.88
RHBDL3P58872 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.33□□□□□ -1.88
RHBDL3P58872 MTND1P34-201ENST00000438556 671 ntBASIC3.33□□□□□ -1.88
RHBDL3P58872 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.33□□□□□ -1.88
RHBDL3P58872 AC124916.1-201ENST00000444020 547 ntBASIC3.33□□□□□ -1.88
RHBDL3P58872 AC112771.1-201ENST00000463581 102 ntBASIC3.33□□□□□ -1.88
RHBDL3P58872 AC133134.1-201ENST00000466800 359 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms