Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CLRN1P58418 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
CLRN1P58418 Y_RNA.380-201ENST00000365663 111 ntBASIC3.37□□□□□ -1.87
CLRN1P58418 RNU6-213P-201ENST00000384051 104 ntBASIC3.37□□□□□ -1.87
CLRN1P58418 AL591034.1-201ENST00000407447 340 ntBASIC3.37□□□□□ -1.87
CLRN1P58418 SNORA3.3-201ENST00000408712 125 ntBASIC3.37□□□□□ -1.87
CLRN1P58418 RNA5SP494-201ENST00000410653 129 ntBASIC3.37□□□□□ -1.87
CLRN1P58418 AC007098.1-201ENST00000420122 367 ntBASIC3.37□□□□□ -1.87
CLRN1P58418 AC091390.1-201ENST00000433904 331 ntBASIC3.37□□□□□ -1.87
CLRN1P58418 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.37□□□□□ -1.87
CLRN1P58418 RPS3AP46-201ENST00000448352 682 ntBASIC3.37□□□□□ -1.87
CLRN1P58418 AC006026.2-201ENST00000457376 180 ntBASIC3.37□□□□□ -1.87
CLRN1P58418 RN7SL132P-201ENST00000478131 296 ntBASIC3.37□□□□□ -1.87
CLRN1P58418 RPS27AP10-201ENST00000496103 208 ntBASIC3.37□□□□□ -1.87
CLRN1P58418 SLC25A15P5-201ENST00000508033 253 ntBASIC3.37□□□□□ -1.87
CLRN1P58418 RAC1P2-201ENST00000511164 579 ntBASIC3.37□□□□□ -1.87
CLRN1P58418 RNA5SP208-201ENST00000516156 78 ntBASIC3.37□□□□□ -1.87
CLRN1P58418 CYCSP30-201ENST00000546447 172 ntBASIC3.37□□□□□ -1.87
CLRN1P58418 SYF2P1-201ENST00000550658 413 ntBASIC3.37□□□□□ -1.87
CLRN1P58418 AC136624.4-201ENST00000573044 370 ntBASIC3.37□□□□□ -1.87
CLRN1P58418 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.37□□□□□ -1.87
CLRN1P58418 VN1R107P-201ENST00000601784 209 ntBASIC3.37□□□□□ -1.87
CLRN1P58418 AL355297.3-201ENST00000604082 446 ntBASIC3.37□□□□□ -1.87
CLRN1P58418 Z98751.3-201ENST00000604447 521 ntBASIC3.37□□□□□ -1.87
CLRN1P58418 MTND4LP5-201ENST00000605152 292 ntBASIC3.37□□□□□ -1.87
CLRN1P58418 MIR6134-201ENST00000617606 109 ntBASIC3.37□□□□□ -1.87
CLRN1P58418 MIR6810-201ENST00000622701 70 ntBASIC3.37□□□□□ -1.87
CLRN1P58418 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CLRN1P58418 AC032011.1-201ENST00000611703 1549 ntBASIC3.37□□□□□ -1.87
CLRN1P58418 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.37□□□□□ -1.87
CLRN1P58418 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLRN1P58418 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CLRN1P58418 MTND5P27-201ENST00000428871 1720 ntBASIC3.36□□□□□ -1.87
CLRN1P58418 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLRN1P58418 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLRN1P58418 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CLRN1P58418 Y_RNA.401-201ENST00000383965 117 ntBASIC3.36□□□□□ -1.87
CLRN1P58418 RNU6-784P-201ENST00000384330 106 ntBASIC3.36□□□□□ -1.87
CLRN1P58418 HMGN2P8-201ENST00000391458 268 ntBASIC3.36□□□□□ -1.87
CLRN1P58418 BTF3L4P2-201ENST00000392798 346 ntBASIC3.36□□□□□ -1.87
CLRN1P58418 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLRN1P58418 NDUFS5P4-201ENST00000412983 318 ntBASIC3.36□□□□□ -1.87
CLRN1P58418 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.36□□□□□ -1.87
CLRN1P58418 AC099548.1-201ENST00000421443 426 ntBASIC3.36□□□□□ -1.87
CLRN1P58418 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.36□□□□□ -1.87
CLRN1P58418 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.36□□□□□ -1.87
CLRN1P58418 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLRN1P58418 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.36□□□□□ -1.87
CLRN1P58418 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.36□□□□□ -1.87
CLRN1P58418 RPL30P10-201ENST00000488148 337 ntBASIC3.36□□□□□ -1.87
CLRN1P58418 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.36□□□□□ -1.87
CLRN1P58418 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.36□□□□□ -1.87
CLRN1P58418 AC131281.1-201ENST00000522984 164 ntBASIC3.36□□□□□ -1.87
CLRN1P58418 AC040926.1-201ENST00000530195 238 ntBASIC3.36□□□□□ -1.87
CLRN1P58418 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLRN1P58418 AC011602.1-201ENST00000546484 331 ntBASIC3.36□□□□□ -1.87
CLRN1P58418 AL161670.1-201ENST00000554348 137 ntBASIC3.36□□□□□ -1.87
CLRN1P58418 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.36□□□□□ -1.87
CLRN1P58418 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.36□□□□□ -1.87
CLRN1P58418 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.36□□□□□ -1.87
CLRN1P58418 VN1R91P-201ENST00000594377 169 ntBASIC3.36□□□□□ -1.87
CLRN1P58418 AC020914.4-201ENST00000597690 277 ntBASIC3.36□□□□□ -1.87
CLRN1P58418 AL021879.1-201ENST00000611756 288 ntBASIC3.36□□□□□ -1.87
CLRN1P58418 AC241585.2-209ENST00000638217 143 ntBASIC3.36□□□□□ -1.87
CLRN1P58418 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLRN1P58418 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
CLRN1P58418 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.35□□□□□ -1.87
CLRN1P58418 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLRN1P58418 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLRN1P58418 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CLRN1P58418 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.35□□□□□ -1.87
CLRN1P58418 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLRN1P58418 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLRN1P58418 RNA5SP322-201ENST00000363617 119 ntBASIC3.35□□□□□ -1.87
CLRN1P58418 Y_RNA.210-201ENST00000364161 110 ntBASIC3.35□□□□□ -1.87
CLRN1P58418 SNORA69.1-201ENST00000390904 137 ntBASIC3.35□□□□□ -1.87
CLRN1P58418 RNA5SP424-201ENST00000390988 115 ntBASIC3.35□□□□□ -1.87
CLRN1P58418 RNU6-1109P-201ENST00000391187 107 ntBASIC3.35□□□□□ -1.87
CLRN1P58418 RPS4XP3-201ENST00000398541 413 ntBASIC3.35□□□□□ -1.87
CLRN1P58418 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.35□□□□□ -1.87
CLRN1P58418 MIR1252-201ENST00000408861 65 ntBASIC3.35□□□□□ -1.87
CLRN1P58418 AP000275.1-201ENST00000411943 390 ntBASIC3.35□□□□□ -1.87
CLRN1P58418 AC004975.1-201ENST00000428733 208 ntBASIC3.35□□□□□ -1.87
CLRN1P58418 AL591043.1-201ENST00000432461 424 ntBASIC3.35□□□□□ -1.87
CLRN1P58418 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.35□□□□□ -1.87
CLRN1P58418 SNORA71B-202ENST00000439232 272 ntBASIC3.35□□□□□ -1.87
CLRN1P58418 AC124916.1-201ENST00000444020 547 ntBASIC3.35□□□□□ -1.87
CLRN1P58418 RPL26P9-201ENST00000457466 433 ntBASIC3.35□□□□□ -1.87
CLRN1P58418 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.35□□□□□ -1.87
CLRN1P58418 RN7SKP83-201ENST00000516512 178 ntBASIC3.35□□□□□ -1.87
CLRN1P58418 Y_RNA.715-201ENST00000517082 110 ntBASIC3.35□□□□□ -1.87
CLRN1P58418 AL590705.4-201ENST00000532209 134 ntBASIC3.35□□□□□ -1.87
CLRN1P58418 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.35□□□□□ -1.87
CLRN1P58418 AL451007.1-201ENST00000595491 289 ntBASIC3.35□□□□□ -1.87
CLRN1P58418 AC244505.7-201ENST00000599675 272 ntBASIC3.35□□□□□ -1.87
CLRN1P58418 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.35□□□□□ -1.87
CLRN1P58418 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.35□□□□□ -1.87
CLRN1P58418 U2.1-201ENST00000618978 145 ntBASIC3.35□□□□□ -1.87
CLRN1P58418 RNA5SP196-201ENST00000625967 102 ntBASIC3.35□□□□□ -1.87
CLRN1P58418 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms