Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 CKS1BP7-201ENST00000522230 235 ntBASIC3.74□□□□□ -1.81
GFRA1P56159 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.74□□□□□ -1.81
GFRA1P56159 AP000867.2-201ENST00000532468 320 ntBASIC3.74□□□□□ -1.81
GFRA1P56159 AP002770.2-201ENST00000543613 532 ntBASIC3.74□□□□□ -1.81
GFRA1P56159 HSPE1P4-201ENST00000550617 308 ntBASIC3.74□□□□□ -1.81
GFRA1P56159 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.74□□□□□ -1.81
GFRA1P56159 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.74□□□□□ -1.81
GFRA1P56159 AL138880.2-201ENST00000616214 239 ntBASIC3.74□□□□□ -1.81
GFRA1P56159 AC137590.2-201ENST00000619709 240 ntBASIC3.74□□□□□ -1.81
GFRA1P56159 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
GFRA1P56159 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.74□□□□□ -1.81
GFRA1P56159 ZNF826P-207ENST00000622273 1910 ntBASIC3.74□□□□□ -1.81
GFRA1P56159 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.74□□□□□ -1.81
GFRA1P56159 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
GFRA1P56159 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
GFRA1P56159 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
GFRA1P56159 SPRR2C-201ENST00000290702 219 ntBASIC3.73□□□□□ -1.81
GFRA1P56159 SNORA29-201ENST00000384183 140 ntBASIC3.73□□□□□ -1.81
GFRA1P56159 MTHFD2P2-201ENST00000407725 247 ntBASIC3.73□□□□□ -1.81
GFRA1P56159 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.73□□□□□ -1.81
GFRA1P56159 AL161651.1-201ENST00000440882 223 ntBASIC3.73□□□□□ -1.81
GFRA1P56159 AC006011.1-201ENST00000442758 349 ntBASIC3.73□□□□□ -1.81
GFRA1P56159 GPM6BP3-201ENST00000442797 145 ntBASIC3.73□□□□□ -1.81
GFRA1P56159 PPIAP15-201ENST00000479662 484 ntBASIC3.73□□□□□ -1.81
GFRA1P56159 AC067942.3-201ENST00000512025 362 ntBASIC3.73□□□□□ -1.81
GFRA1P56159 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.73□□□□□ -1.81
GFRA1P56159 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.73□□□□□ -1.81
GFRA1P56159 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.73□□□□□ -1.81
GFRA1P56159 MTND6P33-201ENST00000571794 183 ntBASIC3.73□□□□□ -1.81
GFRA1P56159 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.73□□□□□ -1.81
GFRA1P56159 AL355877.2-201ENST00000603670 358 ntBASIC3.73□□□□□ -1.81
GFRA1P56159 AC015813.4-201ENST00000610469 179 ntBASIC3.73□□□□□ -1.81
GFRA1P56159 U6.92-201ENST00000636464 89 ntBASIC3.73□□□□□ -1.81
GFRA1P56159 RLIMP1-201ENST00000339626 1680 ntBASIC3.73□□□□□ -1.81
GFRA1P56159 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
GFRA1P56159 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
GFRA1P56159 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
GFRA1P56159 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.72□□□□□ -1.81
GFRA1P56159 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.72□□□□□ -1.81
GFRA1P56159 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
GFRA1P56159 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
GFRA1P56159 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
GFRA1P56159 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.72□□□□□ -1.81
GFRA1P56159 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
GFRA1P56159 RNU6-806P-201ENST00000365147 105 ntBASIC3.72□□□□□ -1.81
GFRA1P56159 RNU6-487P-201ENST00000365430 104 ntBASIC3.72□□□□□ -1.81
GFRA1P56159 Y_RNA.458-201ENST00000384240 102 ntBASIC3.72□□□□□ -1.81
GFRA1P56159 UBA52P6-201ENST00000399822 382 ntBASIC3.72□□□□□ -1.81
GFRA1P56159 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.72□□□□□ -1.81
GFRA1P56159 AC011742.1-201ENST00000431448 434 ntBASIC3.72□□□□□ -1.81
GFRA1P56159 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.72□□□□□ -1.81
GFRA1P56159 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.72□□□□□ -1.81
GFRA1P56159 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.72□□□□□ -1.81
GFRA1P56159 AP002884.2-201ENST00000471647 395 ntBASIC3.72□□□□□ -1.81
GFRA1P56159 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.72□□□□□ -1.81
GFRA1P56159 AF186996.7-201ENST00000492781 209 ntBASIC3.72□□□□□ -1.81
GFRA1P56159 AC022868.1-201ENST00000517767 391 ntBASIC3.72□□□□□ -1.81
GFRA1P56159 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.72□□□□□ -1.81
GFRA1P56159 AP003733.2-201ENST00000529409 171 ntBASIC3.72□□□□□ -1.81
GFRA1P56159 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.72□□□□□ -1.81
GFRA1P56159 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.72□□□□□ -1.81
GFRA1P56159 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.72□□□□□ -1.81
GFRA1P56159 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.72□□□□□ -1.81
GFRA1P56159 AC068831.7-201ENST00000616954 363 ntBASIC3.72□□□□□ -1.81
GFRA1P56159 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.72□□□□□ -1.81
GFRA1P56159 MIR7702-201ENST00000621931 59 ntBASIC3.72□□□□□ -1.81
GFRA1P56159 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
GFRA1P56159 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
GFRA1P56159 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
GFRA1P56159 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
GFRA1P56159 AC011266.1-201ENST00000624119 3569 ntBASIC3.72□□□□□ -1.81
GFRA1P56159 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
GFRA1P56159 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
GFRA1P56159 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
GFRA1P56159 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
GFRA1P56159 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.71□□□□□ -1.82
GFRA1P56159 MIR372-201ENST00000362225 67 ntBASIC3.71□□□□□ -1.82
GFRA1P56159 RNU6-222P-201ENST00000362438 107 ntBASIC3.71□□□□□ -1.82
GFRA1P56159 Y_RNA.26-201ENST00000362539 101 ntBASIC3.71□□□□□ -1.82
GFRA1P56159 Y_RNA.376-201ENST00000365638 108 ntBASIC3.71□□□□□ -1.82
GFRA1P56159 Y_RNA.439-201ENST00000384119 94 ntBASIC3.71□□□□□ -1.82
GFRA1P56159 RNU6-198P-201ENST00000384258 104 ntBASIC3.71□□□□□ -1.82
GFRA1P56159 RNU6-541P-201ENST00000384709 110 ntBASIC3.71□□□□□ -1.82
GFRA1P56159 MIR1193-201ENST00000408109 78 ntBASIC3.71□□□□□ -1.82
GFRA1P56159 RNA5SP390-201ENST00000410191 113 ntBASIC3.71□□□□□ -1.82
GFRA1P56159 RN7SKP61-201ENST00000410642 295 ntBASIC3.71□□□□□ -1.82
GFRA1P56159 AC091286.1-201ENST00000431233 461 ntBASIC3.71□□□□□ -1.82
GFRA1P56159 RPS15AP5-201ENST00000436276 388 ntBASIC3.71□□□□□ -1.82
GFRA1P56159 AC069285.2-201ENST00000440210 275 ntBASIC3.71□□□□□ -1.82
GFRA1P56159 AC010099.1-201ENST00000455434 375 ntBASIC3.71□□□□□ -1.82
GFRA1P56159 U8.22-201ENST00000459141 133 ntBASIC3.71□□□□□ -1.82
GFRA1P56159 AC107626.1-201ENST00000471084 183 ntBASIC3.71□□□□□ -1.82
GFRA1P56159 AC010469.2-201ENST00000496412 480 ntBASIC3.71□□□□□ -1.82
GFRA1P56159 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.71□□□□□ -1.82
GFRA1P56159 IGLV3-26-201ENST00000520756 302 ntBASIC3.71□□□□□ -1.82
GFRA1P56159 AC093023.1-201ENST00000547375 507 ntBASIC3.71□□□□□ -1.82
GFRA1P56159 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.71□□□□□ -1.82
GFRA1P56159 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
GFRA1P56159 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.71□□□□□ -1.82
GFRA1P56159 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms