Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.49□□□□□ -1.85
CACNA2D1P54289 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.49□□□□□ -1.85
CACNA2D1P54289 snoU13.4-201ENST00000458916 104 ntBASIC3.49□□□□□ -1.85
CACNA2D1P54289 RNU6-953P-201ENST00000459154 107 ntBASIC3.49□□□□□ -1.85
CACNA2D1P54289 U8.20-201ENST00000459445 131 ntBASIC3.49□□□□□ -1.85
CACNA2D1P54289 SNRPGP3-201ENST00000469405 227 ntBASIC3.49□□□□□ -1.85
CACNA2D1P54289 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.49□□□□□ -1.85
CACNA2D1P54289 RN7SL504P-201ENST00000494496 287 ntBASIC3.49□□□□□ -1.85
CACNA2D1P54289 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.49□□□□□ -1.85
CACNA2D1P54289 AC110794.1-201ENST00000505816 425 ntBASIC3.49□□□□□ -1.85
CACNA2D1P54289 SNORA31.3-201ENST00000516029 96 ntBASIC3.49□□□□□ -1.85
CACNA2D1P54289 SNORD116.3-201ENST00000517176 78 ntBASIC3.49□□□□□ -1.85
CACNA2D1P54289 RNA5SP380-201ENST00000517190 98 ntBASIC3.49□□□□□ -1.85
CACNA2D1P54289 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CACNA2D1P54289 ERHP1-201ENST00000523006 310 ntBASIC3.49□□□□□ -1.85
CACNA2D1P54289 AC023442.1-201ENST00000531247 422 ntBASIC3.49□□□□□ -1.85
CACNA2D1P54289 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.49□□□□□ -1.85
CACNA2D1P54289 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.49□□□□□ -1.85
CACNA2D1P54289 ELOCP5-201ENST00000604924 333 ntBASIC3.49□□□□□ -1.85
CACNA2D1P54289 AC006023.2-201ENST00000609916 167 ntBASIC3.49□□□□□ -1.85
CACNA2D1P54289 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.49□□□□□ -1.85
CACNA2D1P54289 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.49□□□□□ -1.85
CACNA2D1P54289 AC007792.1-201ENST00000623023 402 ntBASIC3.49□□□□□ -1.85
CACNA2D1P54289 U6.98-201ENST00000637157 84 ntBASIC3.49□□□□□ -1.85
CACNA2D1P54289 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CACNA2D1P54289 SRP72P2-201ENST00000344851 1979 ntBASIC3.49□□□□□ -1.85
CACNA2D1P54289 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CACNA2D1P54289 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CACNA2D1P54289 AC091812.1-201ENST00000432235 1948 ntBASIC3.48□□□□□ -1.85
CACNA2D1P54289 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
CACNA2D1P54289 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CACNA2D1P54289 MIR148B-201ENST00000362252 99 ntBASIC3.48□□□□□ -1.85
CACNA2D1P54289 Y_RNA.188-201ENST00000363952 111 ntBASIC3.48□□□□□ -1.85
CACNA2D1P54289 Y_RNA.389-201ENST00000383924 113 ntBASIC3.48□□□□□ -1.85
CACNA2D1P54289 RNU6-1074P-201ENST00000383995 104 ntBASIC3.48□□□□□ -1.85
CACNA2D1P54289 RNU6-76P-201ENST00000384060 104 ntBASIC3.48□□□□□ -1.85
CACNA2D1P54289 Y_RNA.574-201ENST00000384766 95 ntBASIC3.48□□□□□ -1.85
CACNA2D1P54289 RNU6-882P-201ENST00000391025 103 ntBASIC3.48□□□□□ -1.85
CACNA2D1P54289 AL356968.1-201ENST00000416622 474 ntBASIC3.48□□□□□ -1.85
CACNA2D1P54289 AC245291.1-201ENST00000419501 328 ntBASIC3.48□□□□□ -1.85
CACNA2D1P54289 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.48□□□□□ -1.85
CACNA2D1P54289 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.48□□□□□ -1.85
CACNA2D1P54289 MRPS18CP6-201ENST00000423587 223 ntBASIC3.48□□□□□ -1.85
CACNA2D1P54289 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.48□□□□□ -1.85
CACNA2D1P54289 AC093151.1-201ENST00000427711 313 ntBASIC3.48□□□□□ -1.85
CACNA2D1P54289 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.48□□□□□ -1.85
CACNA2D1P54289 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.48□□□□□ -1.85
CACNA2D1P54289 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.48□□□□□ -1.85
CACNA2D1P54289 FTH1P25-201ENST00000447665 469 ntBASIC3.48□□□□□ -1.85
CACNA2D1P54289 RPS4XP13-201ENST00000483219 789 ntBASIC3.48□□□□□ -1.85
CACNA2D1P54289 RN7SL283P-201ENST00000489055 303 ntBASIC3.48□□□□□ -1.85
CACNA2D1P54289 MTND3P25-201ENST00000509243 135 ntBASIC3.48□□□□□ -1.85
CACNA2D1P54289 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.48□□□□□ -1.85
CACNA2D1P54289 RNU6-1271P-201ENST00000517049 105 ntBASIC3.48□□□□□ -1.85
CACNA2D1P54289 AC104576.1-201ENST00000524225 88 ntBASIC3.48□□□□□ -1.85
CACNA2D1P54289 MIR5195-201ENST00000583555 115 ntBASIC3.48□□□□□ -1.85
CACNA2D1P54289 NUTF2P8-201ENST00000604593 363 ntBASIC3.48□□□□□ -1.85
CACNA2D1P54289 AC107294.3-201ENST00000609211 526 ntBASIC3.48□□□□□ -1.85
CACNA2D1P54289 AC099778.2-201ENST00000610904 211 ntBASIC3.48□□□□□ -1.85
CACNA2D1P54289 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.48□□□□□ -1.85
CACNA2D1P54289 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.48□□□□□ -1.85
CACNA2D1P54289 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.48□□□□□ -1.85
CACNA2D1P54289 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.48□□□□□ -1.85
CACNA2D1P54289 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.48□□□□□ -1.85
CACNA2D1P54289 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CACNA2D1P54289 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CACNA2D1P54289 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
CACNA2D1P54289 AC093908.1-201ENST00000623125 8092 ntBASIC3.47□□□□□ -1.85
CACNA2D1P54289 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
CACNA2D1P54289 SNORA63.7-201ENST00000365579 123 ntBASIC3.47□□□□□ -1.85
CACNA2D1P54289 RNU6-784P-201ENST00000384330 106 ntBASIC3.47□□□□□ -1.85
CACNA2D1P54289 MIR578-201ENST00000384828 96 ntBASIC3.47□□□□□ -1.85
CACNA2D1P54289 MIR491-201ENST00000384877 84 ntBASIC3.47□□□□□ -1.85
CACNA2D1P54289 SNORD73A-201ENST00000386062 65 ntBASIC3.47□□□□□ -1.85
CACNA2D1P54289 RNU6-817P-201ENST00000391083 104 ntBASIC3.47□□□□□ -1.85
CACNA2D1P54289 Y_RNA.618-201ENST00000410949 107 ntBASIC3.47□□□□□ -1.85
CACNA2D1P54289 RN7SKP58-201ENST00000411010 305 ntBASIC3.47□□□□□ -1.85
CACNA2D1P54289 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.47□□□□□ -1.85
CACNA2D1P54289 RPL23AP82-202ENST00000427528 469 ntBASIC3.47□□□□□ -1.85
CACNA2D1P54289 CENPBD1P1-201ENST00000464061 469 ntBASIC3.47□□□□□ -1.85
CACNA2D1P54289 RPL21P104-201ENST00000464143 478 ntBASIC3.47□□□□□ -1.85
CACNA2D1P54289 MLLT10P2-201ENST00000506434 249 ntBASIC3.47□□□□□ -1.85
CACNA2D1P54289 APOOP4-201ENST00000513530 597 ntBASIC3.47□□□□□ -1.85
CACNA2D1P54289 GMPSP1-201ENST00000514075 579 ntBASIC3.47□□□□□ -1.85
CACNA2D1P54289 SNORA64.4-201ENST00000516632 81 ntBASIC3.47□□□□□ -1.85
CACNA2D1P54289 RNU6-914P-201ENST00000516749 109 ntBASIC3.47□□□□□ -1.85
CACNA2D1P54289 AC107934.2-201ENST00000518653 310 ntBASIC3.47□□□□□ -1.85
CACNA2D1P54289 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.47□□□□□ -1.85
CACNA2D1P54289 MIR5680-201ENST00000577577 84 ntBASIC3.47□□□□□ -1.85
CACNA2D1P54289 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
CACNA2D1P54289 RNU6-85P-201ENST00000605989 107 ntBASIC3.47□□□□□ -1.85
CACNA2D1P54289 AL353748.2-201ENST00000622148 471 ntBASIC3.47□□□□□ -1.85
CACNA2D1P54289 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.47□□□□□ -1.85
CACNA2D1P54289 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.47□□□□□ -1.85
CACNA2D1P54289 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CACNA2D1P54289 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.47□□□□□ -1.85
CACNA2D1P54289 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.47□□□□□ -1.85
CACNA2D1P54289 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.47□□□□□ -1.85
CACNA2D1P54289 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.47□□□□□ -1.85
CACNA2D1P54289 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 144.8 ms