Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 U3.42-201ENST00000408746 214 ntBASIC3.34□□□□□ -1.87
COPB1P53618 MTCO2P27-201ENST00000420740 428 ntBASIC3.34□□□□□ -1.87
COPB1P53618 AL590632.1-201ENST00000424289 371 ntBASIC3.34□□□□□ -1.87
COPB1P53618 GPM6BP2-201ENST00000432046 144 ntBASIC3.34□□□□□ -1.87
COPB1P53618 AL359672.1-201ENST00000442302 409 ntBASIC3.34□□□□□ -1.87
COPB1P53618 AC009237.8-201ENST00000445492 379 ntBASIC3.34□□□□□ -1.87
COPB1P53618 GPM6BP1-201ENST00000446387 144 ntBASIC3.34□□□□□ -1.87
COPB1P53618 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.34□□□□□ -1.87
COPB1P53618 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.34□□□□□ -1.87
COPB1P53618 SNORA59A-201ENST00000459326 152 ntBASIC3.34□□□□□ -1.87
COPB1P53618 RN7SL863P-201ENST00000462370 296 ntBASIC3.34□□□□□ -1.87
COPB1P53618 AP004217.1-201ENST00000480579 346 ntBASIC3.34□□□□□ -1.87
COPB1P53618 AC092185.1-201ENST00000491371 97 ntBASIC3.34□□□□□ -1.87
COPB1P53618 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.34□□□□□ -1.87
COPB1P53618 AC005741.1-201ENST00000511094 432 ntBASIC3.34□□□□□ -1.87
COPB1P53618 RNU6-1332P-201ENST00000516666 104 ntBASIC3.34□□□□□ -1.87
COPB1P53618 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.34□□□□□ -1.87
COPB1P53618 AC087854.1-201ENST00000519706 414 ntBASIC3.34□□□□□ -1.87
COPB1P53618 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.34□□□□□ -1.87
COPB1P53618 TRAV28-201ENST00000557548 323 ntBASIC3.34□□□□□ -1.87
COPB1P53618 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.34□□□□□ -1.87
COPB1P53618 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.34□□□□□ -1.87
COPB1P53618 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.34□□□□□ -1.87
COPB1P53618 AC124303.1-201ENST00000605703 360 ntBASIC3.34□□□□□ -1.87
COPB1P53618 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.34□□□□□ -1.87
COPB1P53618 AC084781.2-201ENST00000615568 161 ntBASIC3.34□□□□□ -1.87
COPB1P53618 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
COPB1P53618 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.34□□□□□ -1.88
COPB1P53618 AC007785.2-201ENST00000598627 1916 ntBASIC3.33□□□□□ -1.88
COPB1P53618 RNU6-395P-201ENST00000365662 106 ntBASIC3.33□□□□□ -1.88
COPB1P53618 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COPB1P53618 RNU6-1179P-201ENST00000384667 107 ntBASIC3.33□□□□□ -1.88
COPB1P53618 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
COPB1P53618 RNU6-370P-201ENST00000411008 104 ntBASIC3.33□□□□□ -1.88
COPB1P53618 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.33□□□□□ -1.88
COPB1P53618 UBE2D3P2-201ENST00000424409 445 ntBASIC3.33□□□□□ -1.88
COPB1P53618 AC007919.1-201ENST00000429380 217 ntBASIC3.33□□□□□ -1.88
COPB1P53618 AC006028.1-201ENST00000438379 402 ntBASIC3.33□□□□□ -1.88
COPB1P53618 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.33□□□□□ -1.88
COPB1P53618 PIGFP3-201ENST00000441918 722 ntBASIC3.33□□□□□ -1.88
COPB1P53618 CECR9-201ENST00000453421 199 ntBASIC3.33□□□□□ -1.88
COPB1P53618 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.33□□□□□ -1.88
COPB1P53618 Y_RNA.639-201ENST00000458981 102 ntBASIC3.33□□□□□ -1.88
COPB1P53618 KC877373.1-201ENST00000479066 408 ntBASIC3.33□□□□□ -1.88
COPB1P53618 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
COPB1P53618 AC009902.1-201ENST00000519351 183 ntBASIC3.33□□□□□ -1.88
COPB1P53618 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
COPB1P53618 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.33□□□□□ -1.88
COPB1P53618 AC020661.2-201ENST00000560114 134 ntBASIC3.33□□□□□ -1.88
COPB1P53618 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.33□□□□□ -1.88
COPB1P53618 UBL5P2-201ENST00000583788 219 ntBASIC3.33□□□□□ -1.88
COPB1P53618 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
COPB1P53618 AC136601.2-201ENST00000604356 474 ntBASIC3.33□□□□□ -1.88
COPB1P53618 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.33□□□□□ -1.88
COPB1P53618 AC007318.2-201ENST00000620999 243 ntBASIC3.33□□□□□ -1.88
COPB1P53618 AC018692.3-201ENST00000623929 123 ntBASIC3.33□□□□□ -1.88
COPB1P53618 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.33□□□□□ -1.88
COPB1P53618 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.33□□□□□ -1.88
COPB1P53618 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.32□□□□□ -1.88
COPB1P53618 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
COPB1P53618 RNU6-1188P-201ENST00000363795 107 ntBASIC3.32□□□□□ -1.88
COPB1P53618 RNU6-95P-201ENST00000384697 107 ntBASIC3.32□□□□□ -1.88
COPB1P53618 snosnR66.1-201ENST00000391095 99 ntBASIC3.32□□□□□ -1.88
COPB1P53618 MTCYBP4-201ENST00000401524 249 ntBASIC3.32□□□□□ -1.88
COPB1P53618 RNU6-1025P-201ENST00000410629 104 ntBASIC3.32□□□□□ -1.88
COPB1P53618 RNU6-1304P-201ENST00000411374 106 ntBASIC3.32□□□□□ -1.88
COPB1P53618 RNU2-71P-201ENST00000411395 189 ntBASIC3.32□□□□□ -1.88
COPB1P53618 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.32□□□□□ -1.88
COPB1P53618 AC092047.1-201ENST00000424997 240 ntBASIC3.32□□□□□ -1.88
COPB1P53618 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.32□□□□□ -1.88
COPB1P53618 AC005300.1-201ENST00000428401 373 ntBASIC3.32□□□□□ -1.88
COPB1P53618 AC005326.1-201ENST00000429197 123 ntBASIC3.32□□□□□ -1.88
COPB1P53618 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.32□□□□□ -1.88
COPB1P53618 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.32□□□□□ -1.88
COPB1P53618 RNU7-138P-201ENST00000459479 64 ntBASIC3.32□□□□□ -1.88
COPB1P53618 AC109925.1-201ENST00000478069 331 ntBASIC3.32□□□□□ -1.88
COPB1P53618 AC011005.2-201ENST00000487324 359 ntBASIC3.32□□□□□ -1.88
COPB1P53618 AC092436.3-201ENST00000511788 257 ntBASIC3.32□□□□□ -1.88
COPB1P53618 RNA5SP290-201ENST00000517133 127 ntBASIC3.32□□□□□ -1.88
COPB1P53618 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.32□□□□□ -1.88
COPB1P53618 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.32□□□□□ -1.88
COPB1P53618 AC099506.2-201ENST00000623074 221 ntBASIC3.32□□□□□ -1.88
COPB1P53618 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
COPB1P53618 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
COPB1P53618 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
COPB1P53618 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
COPB1P53618 AL359693.1-201ENST00000614959 2407 ntBASIC3.31□□□□□ -1.88
COPB1P53618 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.31□□□□□ -1.88
COPB1P53618 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
COPB1P53618 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
COPB1P53618 SNORD3E-201ENST00000362899 217 ntBASIC3.31□□□□□ -1.88
COPB1P53618 SNORA63-201ENST00000363450 132 ntBASIC3.31□□□□□ -1.88
COPB1P53618 RNU6-384P-201ENST00000364900 104 ntBASIC3.31□□□□□ -1.88
COPB1P53618 SNORA51.4-201ENST00000364993 124 ntBASIC3.31□□□□□ -1.88
COPB1P53618 RNU6-474P-201ENST00000384243 107 ntBASIC3.31□□□□□ -1.88
COPB1P53618 MIR493-201ENST00000385254 89 ntBASIC3.31□□□□□ -1.88
COPB1P53618 RN7SKP58-201ENST00000411010 305 ntBASIC3.31□□□□□ -1.88
COPB1P53618 AL592148.1-201ENST00000413568 445 ntBASIC3.31□□□□□ -1.88
COPB1P53618 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.31□□□□□ -1.88
COPB1P53618 AL590383.1-201ENST00000428602 75 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms