Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AP001981.2-201ENST00000603241 418 ntBASIC1.91□□□□□ -2.1
ACLYP53396 AC174048.1-201ENST00000603389 144 ntBASIC1.91□□□□□ -2.1
ACLYP53396 AL031667.3-201ENST00000620124 655 ntBASIC1.91□□□□□ -2.1
ACLYP53396 uc_338.20-201ENST00000621563 178 ntBASIC1.91□□□□□ -2.1
ACLYP53396 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
ACLYP53396 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
ACLYP53396 RNU6-395P-201ENST00000365662 106 ntBASIC1.9□□□□□ -2.11
ACLYP53396 RNU1-57P-201ENST00000384491 166 ntBASIC1.9□□□□□ -2.11
ACLYP53396 MIR513B-201ENST00000385136 84 ntBASIC1.9□□□□□ -2.11
ACLYP53396 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.9□□□□□ -2.11
ACLYP53396 SSR1P2-201ENST00000415208 787 ntBASIC1.9□□□□□ -2.11
ACLYP53396 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.9□□□□□ -2.11
ACLYP53396 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.9□□□□□ -2.11
ACLYP53396 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.9□□□□□ -2.11
ACLYP53396 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.9□□□□□ -2.11
ACLYP53396 GDI2P2-201ENST00000445131 608 ntBASIC1.9□□□□□ -2.11
ACLYP53396 MTND1P12-201ENST00000455231 147 ntBASIC1.9□□□□□ -2.11
ACLYP53396 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.9□□□□□ -2.11
ACLYP53396 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.9□□□□□ -2.11
ACLYP53396 RNA5SP137-201ENST00000516833 135 ntBASIC1.9□□□□□ -2.11
ACLYP53396 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.9□□□□□ -2.11
ACLYP53396 AC011979.2-201ENST00000527568 352 ntBASIC1.9□□□□□ -2.11
ACLYP53396 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.9□□□□□ -2.11
ACLYP53396 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.9□□□□□ -2.11
ACLYP53396 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
ACLYP53396 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.9□□□□□ -2.11
ACLYP53396 BX248123.2-201ENST00000606318 124 ntBASIC1.9□□□□□ -2.11
ACLYP53396 MIR15A-201ENST00000607334 83 ntBASIC1.9□□□□□ -2.11
ACLYP53396 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
ACLYP53396 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
ACLYP53396 AL391994.1-201ENST00000254724 282 ntBASIC1.89□□□□□ -2.11
ACLYP53396 RNU6-960P-201ENST00000364056 120 ntBASIC1.89□□□□□ -2.11
ACLYP53396 RNU6-660P-201ENST00000364566 109 ntBASIC1.89□□□□□ -2.11
ACLYP53396 RNU6-1200P-201ENST00000384162 107 ntBASIC1.89□□□□□ -2.11
ACLYP53396 RNU6-809P-201ENST00000384461 107 ntBASIC1.89□□□□□ -2.11
ACLYP53396 AL008987.1-201ENST00000415528 237 ntBASIC1.89□□□□□ -2.11
ACLYP53396 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.89□□□□□ -2.11
ACLYP53396 RPS27AP14-201ENST00000422868 454 ntBASIC1.89□□□□□ -2.11
ACLYP53396 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.89□□□□□ -2.11
ACLYP53396 AL008629.1-201ENST00000438615 184 ntBASIC1.89□□□□□ -2.11
ACLYP53396 RPL22P17-201ENST00000438729 315 ntBASIC1.89□□□□□ -2.11
ACLYP53396 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.89□□□□□ -2.11
ACLYP53396 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
ACLYP53396 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.89□□□□□ -2.11
ACLYP53396 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.89□□□□□ -2.11
ACLYP53396 SNORA4.4-201ENST00000515921 135 ntBASIC1.89□□□□□ -2.11
ACLYP53396 AC090888.2-201ENST00000559765 1144 ntBASIC1.89□□□□□ -2.11
ACLYP53396 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.89□□□□□ -2.11
ACLYP53396 AC136619.2-201ENST00000563361 631 ntBASIC1.89□□□□□ -2.11
ACLYP53396 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
ACLYP53396 AC092953.2-201ENST00000608000 699 ntBASIC1.89□□□□□ -2.11
ACLYP53396 AC096772.1-201ENST00000609146 564 ntBASIC1.89□□□□□ -2.11
ACLYP53396 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.89□□□□□ -2.11
ACLYP53396 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.89□□□□□ -2.11
ACLYP53396 AC008121.3-201ENST00000618726 433 ntBASIC1.89□□□□□ -2.11
ACLYP53396 AL162373.1-201ENST00000620433 407 ntBASIC1.89□□□□□ -2.11
ACLYP53396 DUXAP9-208ENST00000622815 614 ntBASIC1.89□□□□□ -2.11
ACLYP53396 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.89□□□□□ -2.11
ACLYP53396 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.89□□□□□ -2.11
ACLYP53396 AC009487.4-201ENST00000624969 3585 ntBASIC1.88□□□□□ -2.11
ACLYP53396 MTND4P23-201ENST00000447723 1363 ntBASIC1.88□□□□□ -2.11
ACLYP53396 AL445523.1-201ENST00000451184 1362 ntBASIC1.88□□□□□ -2.11
ACLYP53396 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.88□□□□□ -2.11
ACLYP53396 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
ACLYP53396 SNORA25B-201ENST00000365507 128 ntBASIC1.88□□□□□ -2.11
ACLYP53396 SNORA75B-201ENST00000384053 137 ntBASIC1.88□□□□□ -2.11
ACLYP53396 SNORA46.1-201ENST00000391069 153 ntBASIC1.88□□□□□ -2.11
ACLYP53396 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.88□□□□□ -2.11
ACLYP53396 AC009518.2-201ENST00000418056 731 ntBASIC1.88□□□□□ -2.11
ACLYP53396 AIMP1P2-201ENST00000425294 312 ntBASIC1.88□□□□□ -2.11
ACLYP53396 HSFY7P-201ENST00000432672 318 ntBASIC1.88□□□□□ -2.11
ACLYP53396 RPL37P21-201ENST00000435890 276 ntBASIC1.88□□□□□ -2.11
ACLYP53396 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.88□□□□□ -2.11
ACLYP53396 HSFY8P-201ENST00000437934 318 ntBASIC1.88□□□□□ -2.11
ACLYP53396 HSFY5P-201ENST00000453726 309 ntBASIC1.88□□□□□ -2.11
ACLYP53396 AC022493.1-201ENST00000492984 337 ntBASIC1.88□□□□□ -2.11
ACLYP53396 AC034244.1-201ENST00000507687 207 ntBASIC1.88□□□□□ -2.11
ACLYP53396 RNU6-311P-201ENST00000516224 102 ntBASIC1.88□□□□□ -2.11
ACLYP53396 MTND2P7-201ENST00000521337 640 ntBASIC1.88□□□□□ -2.11
ACLYP53396 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.88□□□□□ -2.11
ACLYP53396 AC233702.2-202ENST00000562547 291 ntBASIC1.88□□□□□ -2.11
ACLYP53396 AL031274.2-201ENST00000599419 203 ntBASIC1.88□□□□□ -2.11
ACLYP53396 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.88□□□□□ -2.11
ACLYP53396 AP000811.1-201ENST00000603803 651 ntBASIC1.88□□□□□ -2.11
ACLYP53396 AC018638.7-201ENST00000605836 1114 ntBASIC1.88□□□□□ -2.11
ACLYP53396 AL355816.2-201ENST00000610049 647 ntBASIC1.88□□□□□ -2.11
ACLYP53396 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.88□□□□□ -2.11
ACLYP53396 uc_338.5-201ENST00000611839 155 ntBASIC1.88□□□□□ -2.11
ACLYP53396 AC022202.1-201ENST00000613515 211 ntBASIC1.88□□□□□ -2.11
ACLYP53396 SDR42E1P4-201ENST00000620894 481 ntBASIC1.88□□□□□ -2.11
ACLYP53396 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.88□□□□□ -2.11
ACLYP53396 AC092656.1-203ENST00000624134 423 ntBASIC1.88□□□□□ -2.11
ACLYP53396 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
ACLYP53396 RNU6-858P-201ENST00000362436 107 ntBASIC1.87□□□□□ -2.11
ACLYP53396 MIR561-201ENST00000385216 97 ntBASIC1.87□□□□□ -2.11
ACLYP53396 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
ACLYP53396 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
ACLYP53396 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
ACLYP53396 HMGN2P39-201ENST00000398005 273 ntBASIC1.87□□□□□ -2.11
ACLYP53396 AL591034.2-201ENST00000402839 359 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms