Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC124916.1-201ENST00000444020 547 ntBASIC3.32□□□□□ -1.88
NEK3P51956 Z96811.1-201ENST00000445880 108 ntBASIC3.32□□□□□ -1.88
NEK3P51956 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.32□□□□□ -1.88
NEK3P51956 RPL7P43-201ENST00000478876 753 ntBASIC3.32□□□□□ -1.88
NEK3P51956 RNA5SP112-201ENST00000515937 99 ntBASIC3.32□□□□□ -1.88
NEK3P51956 RNU6-377P-201ENST00000515965 102 ntBASIC3.32□□□□□ -1.88
NEK3P51956 Y_RNA.665-201ENST00000516177 98 ntBASIC3.32□□□□□ -1.88
NEK3P51956 SNORA31.18-201ENST00000517043 134 ntBASIC3.32□□□□□ -1.88
NEK3P51956 COX6CP5-201ENST00000527162 228 ntBASIC3.32□□□□□ -1.88
NEK3P51956 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.32□□□□□ -1.88
NEK3P51956 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.32□□□□□ -1.88
NEK3P51956 MIR3200-201ENST00000580767 85 ntBASIC3.32□□□□□ -1.88
NEK3P51956 BNIP3P25-201ENST00000596023 559 ntBASIC3.32□□□□□ -1.88
NEK3P51956 YPEL5P2-201ENST00000605553 359 ntBASIC3.32□□□□□ -1.88
NEK3P51956 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NEK3P51956 AL020991.1-201ENST00000612314 373 ntBASIC3.32□□□□□ -1.88
NEK3P51956 AC244517.12-201ENST00000623581 663 ntBASIC3.32□□□□□ -1.88
NEK3P51956 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.32□□□□□ -1.88
NEK3P51956 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
NEK3P51956 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
NEK3P51956 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
NEK3P51956 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.31□□□□□ -1.88
NEK3P51956 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.31□□□□□ -1.88
NEK3P51956 RNU1-70P-201ENST00000362618 164 ntBASIC3.31□□□□□ -1.88
NEK3P51956 SNORD113-7-201ENST00000363762 77 ntBASIC3.31□□□□□ -1.88
NEK3P51956 MIR23A-201ENST00000385245 73 ntBASIC3.31□□□□□ -1.88
NEK3P51956 AC074117.2-201ENST00000417130 397 ntBASIC3.31□□□□□ -1.88
NEK3P51956 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.31□□□□□ -1.88
NEK3P51956 FABP5P14-201ENST00000437273 393 ntBASIC3.31□□□□□ -1.88
NEK3P51956 RPS15AP7-201ENST00000439294 405 ntBASIC3.31□□□□□ -1.88
NEK3P51956 Z75741.1-201ENST00000446793 314 ntBASIC3.31□□□□□ -1.88
NEK3P51956 AC115115.1-201ENST00000449927 248 ntBASIC3.31□□□□□ -1.88
NEK3P51956 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.31□□□□□ -1.88
NEK3P51956 AP001324.2-201ENST00000461163 319 ntBASIC3.31□□□□□ -1.88
NEK3P51956 AC007547.1-201ENST00000462177 490 ntBASIC3.31□□□□□ -1.88
NEK3P51956 RN7SL283P-201ENST00000489055 303 ntBASIC3.31□□□□□ -1.88
NEK3P51956 RNA5SP217-201ENST00000515959 91 ntBASIC3.31□□□□□ -1.88
NEK3P51956 SNORA31.6-201ENST00000516241 130 ntBASIC3.31□□□□□ -1.88
NEK3P51956 AC109329.1-201ENST00000518744 317 ntBASIC3.31□□□□□ -1.88
NEK3P51956 CKS1BP7-201ENST00000522230 235 ntBASIC3.31□□□□□ -1.88
NEK3P51956 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.31□□□□□ -1.88
NEK3P51956 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.31□□□□□ -1.88
NEK3P51956 MIR4765-201ENST00000585007 77 ntBASIC3.31□□□□□ -1.88
NEK3P51956 AC021646.1-201ENST00000605469 484 ntBASIC3.31□□□□□ -1.88
NEK3P51956 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
NEK3P51956 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
NEK3P51956 AL157817.1-201ENST00000614264 790 ntBASIC3.31□□□□□ -1.88
NEK3P51956 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.31□□□□□ -1.88
NEK3P51956 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NEK3P51956 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NEK3P51956 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
NEK3P51956 RNU6-486P-201ENST00000363116 107 ntBASIC3.3□□□□□ -1.88
NEK3P51956 Y_RNA.248-201ENST00000364501 109 ntBASIC3.3□□□□□ -1.88
NEK3P51956 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NEK3P51956 MIR627-201ENST00000384979 97 ntBASIC3.3□□□□□ -1.88
NEK3P51956 RNU6-332P-201ENST00000391193 108 ntBASIC3.3□□□□□ -1.88
NEK3P51956 RNA5SP229-201ENST00000410809 99 ntBASIC3.3□□□□□ -1.88
NEK3P51956 AL591043.1-201ENST00000432461 424 ntBASIC3.3□□□□□ -1.88
NEK3P51956 CST9LP2-201ENST00000437612 320 ntBASIC3.3□□□□□ -1.88
NEK3P51956 MTCO3P18-201ENST00000440206 761 ntBASIC3.3□□□□□ -1.88
NEK3P51956 AC009296.1-201ENST00000443146 155 ntBASIC3.3□□□□□ -1.88
NEK3P51956 AL590639.1-201ENST00000456484 337 ntBASIC3.3□□□□□ -1.88
NEK3P51956 AC087884.1-201ENST00000469738 328 ntBASIC3.3□□□□□ -1.88
NEK3P51956 AC117503.1-201ENST00000472241 394 ntBASIC3.3□□□□□ -1.88
NEK3P51956 RPL23AP49-201ENST00000492925 468 ntBASIC3.3□□□□□ -1.88
NEK3P51956 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.3□□□□□ -1.88
NEK3P51956 AC090136.1-201ENST00000520009 240 ntBASIC3.3□□□□□ -1.88
NEK3P51956 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.3□□□□□ -1.88
NEK3P51956 AC079598.5-201ENST00000547460 117 ntBASIC3.3□□□□□ -1.88
NEK3P51956 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.3□□□□□ -1.88
NEK3P51956 RPS15AP11-201ENST00000594193 385 ntBASIC3.3□□□□□ -1.88
NEK3P51956 AC123912.5-201ENST00000605470 343 ntBASIC3.3□□□□□ -1.88
NEK3P51956 AL121917.1-203ENST00000605534 577 ntBASIC3.3□□□□□ -1.88
NEK3P51956 RNU6-85P-201ENST00000605989 107 ntBASIC3.3□□□□□ -1.88
NEK3P51956 AC006504.8-201ENST00000621046 635 ntBASIC3.3□□□□□ -1.88
NEK3P51956 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.3□□□□□ -1.88
NEK3P51956 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NEK3P51956 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NEK3P51956 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.3□□□□□ -1.88
NEK3P51956 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NEK3P51956 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.29□□□□□ -1.88
NEK3P51956 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NEK3P51956 RBBP8P1-201ENST00000449447 1844 ntBASIC3.29□□□□□ -1.88
NEK3P51956 RNU6-1010P-201ENST00000362757 107 ntBASIC3.29□□□□□ -1.88
NEK3P51956 RNU6-622P-201ENST00000384272 103 ntBASIC3.29□□□□□ -1.88
NEK3P51956 RPL21P3-201ENST00000395517 478 ntBASIC3.29□□□□□ -1.88
NEK3P51956 RNU4-47P-201ENST00000410876 114 ntBASIC3.29□□□□□ -1.88
NEK3P51956 NDUFB4P5-201ENST00000415445 361 ntBASIC3.29□□□□□ -1.88
NEK3P51956 MRPS10P2-201ENST00000431226 381 ntBASIC3.29□□□□□ -1.88
NEK3P51956 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.29□□□□□ -1.88
NEK3P51956 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.29□□□□□ -1.88
NEK3P51956 AC146507.2-201ENST00000460608 476 ntBASIC3.29□□□□□ -1.88
NEK3P51956 AP000852.1-201ENST00000472460 573 ntBASIC3.29□□□□□ -1.88
NEK3P51956 AC109925.1-201ENST00000478069 331 ntBASIC3.29□□□□□ -1.88
NEK3P51956 RN7SL504P-201ENST00000494496 287 ntBASIC3.29□□□□□ -1.88
NEK3P51956 FAM206BP-201ENST00000510179 541 ntBASIC3.29□□□□□ -1.88
NEK3P51956 SNORA31.23-201ENST00000517219 133 ntBASIC3.29□□□□□ -1.88
NEK3P51956 BTF3P12-201ENST00000519620 469 ntBASIC3.29□□□□□ -1.88
NEK3P51956 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.29□□□□□ -1.88
NEK3P51956 AL133241.1-201ENST00000556832 487 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms