Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC104136.1-201ENST00000512969 394 ntBASIC3□□□□□ -1.93
CLCN3P51790 LRRC34P2-201ENST00000514850 553 ntBASIC3□□□□□ -1.93
CLCN3P51790 RNU4-29P-201ENST00000515943 174 ntBASIC3□□□□□ -1.93
CLCN3P51790 DNAJC8P1-201ENST00000554535 372 ntBASIC3□□□□□ -1.93
CLCN3P51790 AL118558.2-201ENST00000556294 238 ntBASIC3□□□□□ -1.93
CLCN3P51790 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3□□□□□ -1.93
CLCN3P51790 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3□□□□□ -1.93
CLCN3P51790 MIR5692A1-201ENST00000580523 69 ntBASIC3□□□□□ -1.93
CLCN3P51790 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3□□□□□ -1.93
CLCN3P51790 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3□□□□□ -1.93
CLCN3P51790 MIR4719-201ENST00000585233 84 ntBASIC3□□□□□ -1.93
CLCN3P51790 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3□□□□□ -1.93
CLCN3P51790 Y_RNA.804-201ENST00000615262 101 ntBASIC3□□□□□ -1.93
CLCN3P51790 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3□□□□□ -1.93
CLCN3P51790 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3□□□□□ -1.93
CLCN3P51790 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLCN3P51790 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLCN3P51790 MTND5P19-201ENST00000424872 1794 ntBASIC3□□□□□ -1.93
CLCN3P51790 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
CLCN3P51790 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.99□□□□□ -1.93
CLCN3P51790 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.99□□□□□ -1.93
CLCN3P51790 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
CLCN3P51790 MIR412-201ENST00000362142 91 ntBASIC2.99□□□□□ -1.93
CLCN3P51790 RNU6-371P-201ENST00000364283 108 ntBASIC2.99□□□□□ -1.93
CLCN3P51790 RNU6-767P-201ENST00000384132 107 ntBASIC2.99□□□□□ -1.93
CLCN3P51790 SNORA40C-201ENST00000391285 128 ntBASIC2.99□□□□□ -1.93
CLCN3P51790 AL162578.1-201ENST00000406202 378 ntBASIC2.99□□□□□ -1.93
CLCN3P51790 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.99□□□□□ -1.93
CLCN3P51790 ERLEC1P1-201ENST00000433806 578 ntBASIC2.99□□□□□ -1.93
CLCN3P51790 AC098831.1-201ENST00000440661 216 ntBASIC2.99□□□□□ -1.93
CLCN3P51790 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.99□□□□□ -1.93
CLCN3P51790 SNRPFP3-201ENST00000457792 225 ntBASIC2.99□□□□□ -1.93
CLCN3P51790 AC128713.1-201ENST00000471495 306 ntBASIC2.99□□□□□ -1.93
CLCN3P51790 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.99□□□□□ -1.93
CLCN3P51790 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.99□□□□□ -1.93
CLCN3P51790 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.99□□□□□ -1.93
CLCN3P51790 AC008716.1-201ENST00000511084 513 ntBASIC2.99□□□□□ -1.93
CLCN3P51790 AC112206.3-201ENST00000514578 389 ntBASIC2.99□□□□□ -1.93
CLCN3P51790 Y_RNA.665-201ENST00000516177 98 ntBASIC2.99□□□□□ -1.93
CLCN3P51790 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.99□□□□□ -1.93
CLCN3P51790 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.99□□□□□ -1.93
CLCN3P51790 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.99□□□□□ -1.93
CLCN3P51790 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.99□□□□□ -1.93
CLCN3P51790 AC005046.1-201ENST00000608515 625 ntBASIC2.99□□□□□ -1.93
CLCN3P51790 AC063943.3-201ENST00000615562 356 ntBASIC2.99□□□□□ -1.93
CLCN3P51790 HSPA8P4-201ENST00000511877 1920 ntBASIC2.99□□□□□ -1.93
CLCN3P51790 MTND4P14-201ENST00000435799 1354 ntBASIC2.99□□□□□ -1.93
CLCN3P51790 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLCN3P51790 AC110491.1-201ENST00000562191 2010 ntBASIC2.98□□□□□ -1.93
CLCN3P51790 MIR26A1-201ENST00000362205 77 ntBASIC2.98□□□□□ -1.93
CLCN3P51790 RNA5SP139-201ENST00000364340 117 ntBASIC2.98□□□□□ -1.93
CLCN3P51790 SNORD81.2-201ENST00000365153 76 ntBASIC2.98□□□□□ -1.93
CLCN3P51790 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.98□□□□□ -1.93
CLCN3P51790 RNU6-116P-201ENST00000384042 109 ntBASIC2.98□□□□□ -1.93
CLCN3P51790 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CLCN3P51790 BPY2DP-201ENST00000422208 265 ntBASIC2.98□□□□□ -1.93
CLCN3P51790 AL353729.1-201ENST00000425044 720 ntBASIC2.98□□□□□ -1.93
CLCN3P51790 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.98□□□□□ -1.93
CLCN3P51790 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.98□□□□□ -1.93
CLCN3P51790 AC244505.4-201ENST00000434905 287 ntBASIC2.98□□□□□ -1.93
CLCN3P51790 SSXP5-201ENST00000443473 287 ntBASIC2.98□□□□□ -1.93
CLCN3P51790 RNU7-66P-201ENST00000459469 62 ntBASIC2.98□□□□□ -1.93
CLCN3P51790 AC139453.3-201ENST00000493276 369 ntBASIC2.98□□□□□ -1.93
CLCN3P51790 RPS27AP10-201ENST00000496103 208 ntBASIC2.98□□□□□ -1.93
CLCN3P51790 RNU6-1314P-201ENST00000517139 104 ntBASIC2.98□□□□□ -1.93
CLCN3P51790 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.98□□□□□ -1.93
CLCN3P51790 AC025755.1-201ENST00000521306 278 ntBASIC2.98□□□□□ -1.93
CLCN3P51790 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.98□□□□□ -1.93
CLCN3P51790 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.98□□□□□ -1.93
CLCN3P51790 AL137161.1-201ENST00000532231 390 ntBASIC2.98□□□□□ -1.93
CLCN3P51790 BNIP3P6-201ENST00000549284 499 ntBASIC2.98□□□□□ -1.93
CLCN3P51790 MIR3941-201ENST00000582572 103 ntBASIC2.98□□□□□ -1.93
CLCN3P51790 AC011712.1-201ENST00000588959 234 ntBASIC2.98□□□□□ -1.93
CLCN3P51790 NUTF2P8-201ENST00000604593 363 ntBASIC2.98□□□□□ -1.93
CLCN3P51790 AC022140.2-201ENST00000623500 188 ntBASIC2.98□□□□□ -1.93
CLCN3P51790 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.98□□□□□ -1.93
CLCN3P51790 AC073544.1-201ENST00000600110 1595 ntBASIC2.98□□□□□ -1.93
CLCN3P51790 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CLCN3P51790 Y_RNA.813-201ENST00000364639 102 ntBASIC2.97□□□□□ -1.93
CLCN3P51790 SNORA51.4-201ENST00000364993 124 ntBASIC2.97□□□□□ -1.93
CLCN3P51790 DYNLT3P1-201ENST00000378574 347 ntBASIC2.97□□□□□ -1.93
CLCN3P51790 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CLCN3P51790 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.97□□□□□ -1.93
CLCN3P51790 Y_RNA.615-201ENST00000410769 117 ntBASIC2.97□□□□□ -1.93
CLCN3P51790 HSPE1P1-201ENST00000421494 318 ntBASIC2.97□□□□□ -1.93
CLCN3P51790 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.97□□□□□ -1.93
CLCN3P51790 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.97□□□□□ -1.93
CLCN3P51790 RPS29P6-201ENST00000438196 145 ntBASIC2.97□□□□□ -1.93
CLCN3P51790 AC022493.1-201ENST00000492984 337 ntBASIC2.97□□□□□ -1.93
CLCN3P51790 AC009901.1-201ENST00000506703 541 ntBASIC2.97□□□□□ -1.93
CLCN3P51790 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CLCN3P51790 FAM206BP-201ENST00000510179 541 ntBASIC2.97□□□□□ -1.93
CLCN3P51790 MTND3P22-201ENST00000510932 243 ntBASIC2.97□□□□□ -1.93
CLCN3P51790 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.97□□□□□ -1.93
CLCN3P51790 SNORA31.19-201ENST00000517079 126 ntBASIC2.97□□□□□ -1.93
CLCN3P51790 AC022634.1-201ENST00000520765 532 ntBASIC2.97□□□□□ -1.93
CLCN3P51790 AC107953.1-201ENST00000522216 297 ntBASIC2.97□□□□□ -1.93
CLCN3P51790 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.97□□□□□ -1.93
CLCN3P51790 PSMA3P-201ENST00000555485 635 ntBASIC2.97□□□□□ -1.93
CLCN3P51790 MIR5583-1-201ENST00000580941 59 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms