Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 RNU5B-3P-201ENST00000516601 115 ntBASIC2.35□□□□□ -2.03
GPC3P51654 RNA5SP337-201ENST00000517007 109 ntBASIC2.35□□□□□ -2.03
GPC3P51654 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.35□□□□□ -2.03
GPC3P51654 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.35□□□□□ -2.03
GPC3P51654 AC005771.1-201ENST00000585581 349 ntBASIC2.35□□□□□ -2.03
GPC3P51654 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.35□□□□□ -2.03
GPC3P51654 AC130324.3-201ENST00000614165 542 ntBASIC2.35□□□□□ -2.03
GPC3P51654 AP001506.1-201ENST00000615444 211 ntBASIC2.35□□□□□ -2.03
GPC3P51654 AC008121.3-201ENST00000618726 433 ntBASIC2.35□□□□□ -2.03
GPC3P51654 MIR7843-201ENST00000622274 79 ntBASIC2.35□□□□□ -2.03
GPC3P51654 AC099654.13-201ENST00000639774 207 ntBASIC2.35□□□□□ -2.03
GPC3P51654 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.03
GPC3P51654 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.34□□□□□ -2.03
GPC3P51654 FARSBP1-201ENST00000435808 1778 ntBASIC2.34□□□□□ -2.03
GPC3P51654 AL596028.1-201ENST00000326971 197 ntBASIC2.34□□□□□ -2.03
GPC3P51654 SNORD56.2-201ENST00000363242 71 ntBASIC2.34□□□□□ -2.03
GPC3P51654 RNU6-946P-201ENST00000383878 107 ntBASIC2.34□□□□□ -2.03
GPC3P51654 ELOCP4-201ENST00000420090 333 ntBASIC2.34□□□□□ -2.03
GPC3P51654 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.34□□□□□ -2.03
GPC3P51654 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.34□□□□□ -2.03
GPC3P51654 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.34□□□□□ -2.03
GPC3P51654 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.34□□□□□ -2.03
GPC3P51654 MTND6P13-201ENST00000443510 523 ntBASIC2.34□□□□□ -2.03
GPC3P51654 FTH1P25-201ENST00000447665 469 ntBASIC2.34□□□□□ -2.03
GPC3P51654 AL118520.1-201ENST00000450770 291 ntBASIC2.34□□□□□ -2.03
GPC3P51654 FABP5P13-201ENST00000452144 328 ntBASIC2.34□□□□□ -2.03
GPC3P51654 SNORD42A-201ENST00000459584 64 ntBASIC2.34□□□□□ -2.03
GPC3P51654 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.34□□□□□ -2.03
GPC3P51654 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.34□□□□□ -2.03
GPC3P51654 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.34□□□□□ -2.03
GPC3P51654 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.34□□□□□ -2.03
GPC3P51654 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.34□□□□□ -2.03
GPC3P51654 FAM92A1P1-201ENST00000528023 890 ntBASIC2.34□□□□□ -2.03
GPC3P51654 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.34□□□□□ -2.03
GPC3P51654 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.34□□□□□ -2.03
GPC3P51654 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.34□□□□□ -2.03
GPC3P51654 MIR5002-201ENST00000584713 97 ntBASIC2.34□□□□□ -2.03
GPC3P51654 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
GPC3P51654 HMGN1P30-201ENST00000589286 268 ntBASIC2.34□□□□□ -2.03
GPC3P51654 AL451064.1-201ENST00000607718 471 ntBASIC2.34□□□□□ -2.03
GPC3P51654 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.34□□□□□ -2.03
GPC3P51654 AC009233.1-201ENST00000616477 371 ntBASIC2.34□□□□□ -2.03
GPC3P51654 AL603839.4-201ENST00000624658 1005 ntBASIC2.34□□□□□ -2.03
GPC3P51654 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
GPC3P51654 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
GPC3P51654 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.34□□□□□ -2.04
GPC3P51654 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.33□□□□□ -2.04
GPC3P51654 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.33□□□□□ -2.04
GPC3P51654 SNORA4.3-201ENST00000365564 137 ntBASIC2.33□□□□□ -2.04
GPC3P51654 SNORA40.3-201ENST00000390964 122 ntBASIC2.33□□□□□ -2.04
GPC3P51654 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.33□□□□□ -2.04
GPC3P51654 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.33□□□□□ -2.04
GPC3P51654 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.33□□□□□ -2.04
GPC3P51654 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
GPC3P51654 RPS24P1-201ENST00000438550 371 ntBASIC2.33□□□□□ -2.04
GPC3P51654 AL161788.1-201ENST00000441805 169 ntBASIC2.33□□□□□ -2.04
GPC3P51654 PSPHP1-201ENST00000450062 261 ntBASIC2.33□□□□□ -2.04
GPC3P51654 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.33□□□□□ -2.04
GPC3P51654 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.33□□□□□ -2.04
GPC3P51654 AC090515.1-201ENST00000465295 476 ntBASIC2.33□□□□□ -2.04
GPC3P51654 Y_RNA.688-201ENST00000516565 95 ntBASIC2.33□□□□□ -2.04
GPC3P51654 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
GPC3P51654 AP003181.2-201ENST00000528941 181 ntBASIC2.33□□□□□ -2.04
GPC3P51654 AP003122.4-201ENST00000530980 758 ntBASIC2.33□□□□□ -2.04
GPC3P51654 AP002453.2-201ENST00000533503 320 ntBASIC2.33□□□□□ -2.04
GPC3P51654 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
GPC3P51654 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.33□□□□□ -2.04
GPC3P51654 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.33□□□□□ -2.04
GPC3P51654 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.33□□□□□ -2.04
GPC3P51654 AC007229.1-201ENST00000590455 412 ntBASIC2.33□□□□□ -2.04
GPC3P51654 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.33□□□□□ -2.04
GPC3P51654 AP002360.4-201ENST00000606980 481 ntBASIC2.33□□□□□ -2.04
GPC3P51654 AC008250.2-201ENST00000615261 205 ntBASIC2.33□□□□□ -2.04
GPC3P51654 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
GPC3P51654 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
GPC3P51654 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
GPC3P51654 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
GPC3P51654 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
GPC3P51654 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
GPC3P51654 RNU6-858P-201ENST00000362436 107 ntBASIC2.32□□□□□ -2.04
GPC3P51654 RPS3AP36-201ENST00000398190 775 ntBASIC2.32□□□□□ -2.04
GPC3P51654 GSTA9P-201ENST00000406231 611 ntBASIC2.32□□□□□ -2.04
GPC3P51654 AL160275.3-201ENST00000423876 471 ntBASIC2.32□□□□□ -2.04
GPC3P51654 TOMM20P4-201ENST00000427861 435 ntBASIC2.32□□□□□ -2.04
GPC3P51654 MED13P1-201ENST00000428342 171 ntBASIC2.32□□□□□ -2.04
GPC3P51654 MTND1P26-201ENST00000440488 538 ntBASIC2.32□□□□□ -2.04
GPC3P51654 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.32□□□□□ -2.04
GPC3P51654 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.32□□□□□ -2.04
GPC3P51654 AC090255.1-201ENST00000495779 349 ntBASIC2.32□□□□□ -2.04
GPC3P51654 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.32□□□□□ -2.04
GPC3P51654 Vault.3-201ENST00000516676 95 ntBASIC2.32□□□□□ -2.04
GPC3P51654 MIR514B-201ENST00000516774 80 ntBASIC2.32□□□□□ -2.04
GPC3P51654 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.32□□□□□ -2.04
GPC3P51654 MIR548AB-201ENST00000584917 84 ntBASIC2.32□□□□□ -2.04
GPC3P51654 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.32□□□□□ -2.04
GPC3P51654 AC091304.9-201ENST00000612091 226 ntBASIC2.32□□□□□ -2.04
GPC3P51654 AC092656.1-203ENST00000624134 423 ntBASIC2.32□□□□□ -2.04
GPC3P51654 AL359757.2-201ENST00000624309 274 ntBASIC2.32□□□□□ -2.04
GPC3P51654 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.32□□□□□ -2.04
GPC3P51654 U3.4-201ENST00000363352 213 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms