Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.76□□□□□ -1.49
PRIM1P49642 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PRIM1P49642 Y_RNA.797-201ENST00000515977 94 ntBASIC5.76□□□□□ -1.49
PRIM1P49642 TRAV28-201ENST00000557548 323 ntBASIC5.76□□□□□ -1.49
PRIM1P49642 LINC00933-203ENST00000559812 219 ntBASIC5.76□□□□□ -1.49
PRIM1P49642 AC009127.3-201ENST00000570531 403 ntBASIC5.76□□□□□ -1.49
PRIM1P49642 AC024220.1-201ENST00000603675 484 ntBASIC5.76□□□□□ -1.49
PRIM1P49642 AC010999.1-201ENST00000611856 324 ntBASIC5.76□□□□□ -1.49
PRIM1P49642 MIR6875-201ENST00000617506 72 ntBASIC5.76□□□□□ -1.49
PRIM1P49642 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
PRIM1P49642 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC5.76□□□□□ -1.49
PRIM1P49642 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
PRIM1P49642 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.75□□□□□ -1.49
PRIM1P49642 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PRIM1P49642 RNU6-103P-201ENST00000363686 107 ntBASIC5.75□□□□□ -1.49
PRIM1P49642 RNU6-1325P-201ENST00000364905 105 ntBASIC5.75□□□□□ -1.49
PRIM1P49642 MIR186-201ENST00000384988 86 ntBASIC5.75□□□□□ -1.49
PRIM1P49642 EIF4HP2-201ENST00000424380 563 ntBASIC5.75□□□□□ -1.49
PRIM1P49642 AC010154.1-201ENST00000425857 269 ntBASIC5.75□□□□□ -1.49
PRIM1P49642 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC5.75□□□□□ -1.49
PRIM1P49642 RPL23AP58-201ENST00000440453 469 ntBASIC5.75□□□□□ -1.49
PRIM1P49642 AC009237.7-201ENST00000447357 229 ntBASIC5.75□□□□□ -1.49
PRIM1P49642 AC016632.1-201ENST00000503994 196 ntBASIC5.75□□□□□ -1.49
PRIM1P49642 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC5.75□□□□□ -1.49
PRIM1P49642 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC5.75□□□□□ -1.49
PRIM1P49642 MIR4431-201ENST00000579990 94 ntBASIC5.75□□□□□ -1.49
PRIM1P49642 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PRIM1P49642 AC010300.1-201ENST00000600671 5134 ntBASIC5.75□□□□□ -1.49
PRIM1P49642 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PRIM1P49642 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.75□□□□□ -1.49
PRIM1P49642 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
PRIM1P49642 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
PRIM1P49642 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
PRIM1P49642 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
PRIM1P49642 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PRIM1P49642 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PRIM1P49642 MFSD8-242ENST00000641690 4199 ntBASIC5.74□□□□□ -1.49
PRIM1P49642 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PRIM1P49642 MIR208A-201ENST00000362287 71 ntBASIC5.74□□□□□ -1.49
PRIM1P49642 Y_RNA.261-201ENST00000364631 102 ntBASIC5.74□□□□□ -1.49
PRIM1P49642 SNORD32A-201ENST00000364805 84 ntBASIC5.74□□□□□ -1.49
PRIM1P49642 AC009237.10-201ENST00000414112 510 ntBASIC5.74□□□□□ -1.49
PRIM1P49642 SNRPEP9-201ENST00000436794 238 ntBASIC5.74□□□□□ -1.49
PRIM1P49642 AL162151.2-201ENST00000448875 158 ntBASIC5.74□□□□□ -1.49
PRIM1P49642 AC108145.1-201ENST00000503770 153 ntBASIC5.74□□□□□ -1.49
PRIM1P49642 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.74□□□□□ -1.49
PRIM1P49642 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC5.74□□□□□ -1.49
PRIM1P49642 AC107027.2-201ENST00000512197 115 ntBASIC5.74□□□□□ -1.49
PRIM1P49642 RN7SKP164-201ENST00000516138 266 ntBASIC5.74□□□□□ -1.49
PRIM1P49642 UBL5P4-201ENST00000562584 236 ntBASIC5.74□□□□□ -1.49
PRIM1P49642 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC5.74□□□□□ -1.49
PRIM1P49642 AL592437.2-201ENST00000421655 2434 ntBASIC5.74□□□□□ -1.49
PRIM1P49642 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.73□□□□□ -1.49
PRIM1P49642 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.73□□□□□ -1.49
PRIM1P49642 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PRIM1P49642 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.73□□□□□ -1.49
PRIM1P49642 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
PRIM1P49642 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.73□□□□□ -1.49
PRIM1P49642 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.73□□□□□ -1.49
PRIM1P49642 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
PRIM1P49642 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
PRIM1P49642 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PRIM1P49642 Y_RNA.71-201ENST00000362892 104 ntBASIC5.73□□□□□ -1.49
PRIM1P49642 RNA5SP130-201ENST00000364431 114 ntBASIC5.73□□□□□ -1.49
PRIM1P49642 RNA5SP513-201ENST00000364648 118 ntBASIC5.73□□□□□ -1.49
PRIM1P49642 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PRIM1P49642 RNU6-80P-201ENST00000384195 107 ntBASIC5.73□□□□□ -1.49
PRIM1P49642 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
PRIM1P49642 U3.19-201ENST00000390893 196 ntBASIC5.73□□□□□ -1.49
PRIM1P49642 BTF3P11-201ENST00000426582 477 ntBASIC5.73□□□□□ -1.49
PRIM1P49642 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC5.73□□□□□ -1.49
PRIM1P49642 KC877373.1-201ENST00000479066 408 ntBASIC5.73□□□□□ -1.49
PRIM1P49642 AC097462.2-201ENST00000504623 481 ntBASIC5.73□□□□□ -1.49
PRIM1P49642 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC5.73□□□□□ -1.49
PRIM1P49642 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.73□□□□□ -1.49
PRIM1P49642 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC5.73□□□□□ -1.49
PRIM1P49642 MIR4286-201ENST00000580651 93 ntBASIC5.73□□□□□ -1.49
PRIM1P49642 TUG1_4.1-201ENST00000619464 181 ntBASIC5.73□□□□□ -1.49
PRIM1P49642 MIR6075-201ENST00000620782 95 ntBASIC5.73□□□□□ -1.49
PRIM1P49642 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PRIM1P49642 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
PRIM1P49642 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PRIM1P49642 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PRIM1P49642 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PRIM1P49642 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PRIM1P49642 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.72□□□□□ -1.49
PRIM1P49642 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
PRIM1P49642 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PRIM1P49642 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PRIM1P49642 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC5.72□□□□□ -1.49
PRIM1P49642 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
PRIM1P49642 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PRIM1P49642 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
PRIM1P49642 SNORA71.3-201ENST00000362582 128 ntBASIC5.72□□□□□ -1.49
PRIM1P49642 RNA5SP235-201ENST00000365411 114 ntBASIC5.72□□□□□ -1.49
PRIM1P49642 SNORD96B-201ENST00000386148 79 ntBASIC5.72□□□□□ -1.49
PRIM1P49642 PTMAP2-201ENST00000397627 327 ntBASIC5.72□□□□□ -1.49
PRIM1P49642 RPS26P42-201ENST00000413485 326 ntBASIC5.72□□□□□ -1.49
PRIM1P49642 RNU6-625P-201ENST00000459412 107 ntBASIC5.72□□□□□ -1.49
PRIM1P49642 AL121594.1-201ENST00000475906 575 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms