Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.62□□□□□ -1.99
LHX1P48742 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.62□□□□□ -1.99
LHX1P48742 AC006020.1-201ENST00000420179 1854 ntBASIC2.62□□□□□ -1.99
LHX1P48742 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LHX1P48742 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.61□□□□□ -1.99
LHX1P48742 Z82195.2-201ENST00000612348 18351 ntBASIC2.61□□□□□ -1.99
LHX1P48742 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
LHX1P48742 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.61□□□□□ -1.99
LHX1P48742 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LHX1P48742 CALM2P3-201ENST00000400429 449 ntBASIC2.61□□□□□ -1.99
LHX1P48742 U3.37-201ENST00000408528 213 ntBASIC2.61□□□□□ -1.99
LHX1P48742 UBE2V1P10-201ENST00000414685 269 ntBASIC2.61□□□□□ -1.99
LHX1P48742 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.61□□□□□ -1.99
LHX1P48742 AL139413.1-201ENST00000421309 217 ntBASIC2.61□□□□□ -1.99
LHX1P48742 AL669831.1-202ENST00000428504 417 ntBASIC2.61□□□□□ -1.99
LHX1P48742 GTF2IP13-201ENST00000438487 386 ntBASIC2.61□□□□□ -1.99
LHX1P48742 Z96811.1-201ENST00000445880 108 ntBASIC2.61□□□□□ -1.99
LHX1P48742 AC073415.1-201ENST00000449240 153 ntBASIC2.61□□□□□ -1.99
LHX1P48742 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.61□□□□□ -1.99
LHX1P48742 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.61□□□□□ -1.99
LHX1P48742 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.61□□□□□ -1.99
LHX1P48742 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.61□□□□□ -1.99
LHX1P48742 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.61□□□□□ -1.99
LHX1P48742 LRRC34P2-201ENST00000514850 553 ntBASIC2.61□□□□□ -1.99
LHX1P48742 RNU1-86P-201ENST00000516108 154 ntBASIC2.61□□□□□ -1.99
LHX1P48742 SNORA40.12-201ENST00000516329 111 ntBASIC2.61□□□□□ -1.99
LHX1P48742 MIR892C-201ENST00000516410 77 ntBASIC2.61□□□□□ -1.99
LHX1P48742 RNU6-506P-201ENST00000516553 94 ntBASIC2.61□□□□□ -1.99
LHX1P48742 RNU1-107P-201ENST00000516617 154 ntBASIC2.61□□□□□ -1.99
LHX1P48742 HIF1AP1-201ENST00000553642 175 ntBASIC2.61□□□□□ -1.99
LHX1P48742 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.61□□□□□ -1.99
LHX1P48742 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
LHX1P48742 MIR4435-1-201ENST00000582552 80 ntBASIC2.61□□□□□ -1.99
LHX1P48742 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LHX1P48742 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
LHX1P48742 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.61□□□□□ -1.99
LHX1P48742 MIR7515-201ENST00000637837 67 ntBASIC2.61□□□□□ -1.99
LHX1P48742 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.6□□□□□ -1.99
LHX1P48742 SNORA68.1-201ENST00000364537 132 ntBASIC2.6□□□□□ -1.99
LHX1P48742 Y_RNA.255-201ENST00000364581 97 ntBASIC2.6□□□□□ -1.99
LHX1P48742 RNU6-384P-201ENST00000364900 104 ntBASIC2.6□□□□□ -1.99
LHX1P48742 RNU6-393P-201ENST00000384475 107 ntBASIC2.6□□□□□ -1.99
LHX1P48742 RNU6-1127P-201ENST00000384580 107 ntBASIC2.6□□□□□ -1.99
LHX1P48742 RNA5SP492-201ENST00000411330 114 ntBASIC2.6□□□□□ -1.99
LHX1P48742 HMGN2P35-201ENST00000412164 270 ntBASIC2.6□□□□□ -1.99
LHX1P48742 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
LHX1P48742 PGBD4P6-201ENST00000421501 610 ntBASIC2.6□□□□□ -1.99
LHX1P48742 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.6□□□□□ -1.99
LHX1P48742 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.6□□□□□ -1.99
LHX1P48742 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.6□□□□□ -1.99
LHX1P48742 AC016691.1-201ENST00000441321 413 ntBASIC2.6□□□□□ -1.99
LHX1P48742 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.6□□□□□ -1.99
LHX1P48742 SCARNA18-201ENST00000459004 134 ntBASIC2.6□□□□□ -1.99
LHX1P48742 snoU109.2-201ENST00000459316 135 ntBASIC2.6□□□□□ -1.99
LHX1P48742 AC107626.1-201ENST00000471084 183 ntBASIC2.6□□□□□ -1.99
LHX1P48742 AC083798.1-201ENST00000472671 131 ntBASIC2.6□□□□□ -1.99
LHX1P48742 AC011005.2-201ENST00000487324 359 ntBASIC2.6□□□□□ -1.99
LHX1P48742 MTCO3P9-201ENST00000506989 781 ntBASIC2.6□□□□□ -1.99
LHX1P48742 AC009646.1-201ENST00000510455 318 ntBASIC2.6□□□□□ -1.99
LHX1P48742 AC074344.1-201ENST00000512823 224 ntBASIC2.6□□□□□ -1.99
LHX1P48742 RNU5F-8P-201ENST00000515941 111 ntBASIC2.6□□□□□ -1.99
LHX1P48742 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.6□□□□□ -1.99
LHX1P48742 RNA5SP24-201ENST00000516478 95 ntBASIC2.6□□□□□ -1.99
LHX1P48742 ACA59.2-201ENST00000517061 156 ntBASIC2.6□□□□□ -1.99
LHX1P48742 SCARNA11.3-201ENST00000517276 130 ntBASIC2.6□□□□□ -1.99
LHX1P48742 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.6□□□□□ -1.99
LHX1P48742 OR5AQ1P-201ENST00000527596 927 ntBASIC2.6□□□□□ -1.99
LHX1P48742 HSPE1P20-201ENST00000538133 289 ntBASIC2.6□□□□□ -1.99
LHX1P48742 BNIP3P6-201ENST00000549284 499 ntBASIC2.6□□□□□ -1.99
LHX1P48742 EIF1P4-201ENST00000572664 335 ntBASIC2.6□□□□□ -1.99
LHX1P48742 AC011890.2-201ENST00000613393 294 ntBASIC2.6□□□□□ -1.99
LHX1P48742 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.6□□□□□ -1.99
LHX1P48742 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.6□□□□□ -1.99
LHX1P48742 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
LHX1P48742 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
LHX1P48742 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
LHX1P48742 AL354685.2-201ENST00000448218 1447 ntBASIC2.59□□□□□ -1.99
LHX1P48742 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -1.99
LHX1P48742 AC016717.2-201ENST00000609089 5141 ntBASIC2.59□□□□□ -1.99
LHX1P48742 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
LHX1P48742 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
LHX1P48742 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
LHX1P48742 Y_RNA.3-201ENST00000362331 103 ntBASIC2.59□□□□□ -1.99
LHX1P48742 VTRNA1-1-201ENST00000363120 99 ntBASIC2.59□□□□□ -1.99
LHX1P48742 RNU6-1083P-201ENST00000384022 107 ntBASIC2.59□□□□□ -1.99
LHX1P48742 RNU6-72P-201ENST00000384285 79 ntBASIC2.59□□□□□ -1.99
LHX1P48742 RNU6-434P-201ENST00000384376 107 ntBASIC2.59□□□□□ -1.99
LHX1P48742 SNORA41-201ENST00000384675 132 ntBASIC2.59□□□□□ -1.99
LHX1P48742 SNORD70.1-201ENST00000391007 85 ntBASIC2.59□□□□□ -1.99
LHX1P48742 AL139095.1-201ENST00000404326 391 ntBASIC2.59□□□□□ -1.99
LHX1P48742 RNU6-607P-201ENST00000411283 108 ntBASIC2.59□□□□□ -1.99
LHX1P48742 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.59□□□□□ -1.99
LHX1P48742 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.59□□□□□ -1.99
LHX1P48742 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.59□□□□□ -1.99
LHX1P48742 RPS12P2-201ENST00000439728 269 ntBASIC2.59□□□□□ -1.99
LHX1P48742 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.59□□□□□ -1.99
LHX1P48742 AL441985.1-201ENST00000457727 251 ntBASIC2.59□□□□□ -1.99
LHX1P48742 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.59□□□□□ -1.99
LHX1P48742 RNU6-261P-201ENST00000459506 102 ntBASIC2.59□□□□□ -1.99
LHX1P48742 RPS27AP9-201ENST00000477681 438 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms