Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC008993.2-201ENST00000631744 806 ntBASIC1.81□□□□□ -2.12
TNFSF9P41273 MTND5P42-201ENST00000637720 498 ntBASIC1.81□□□□□ -2.12
TNFSF9P41273 MTND4P23-201ENST00000447723 1363 ntBASIC1.81□□□□□ -2.12
TNFSF9P41273 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
TNFSF9P41273 AP000568.1-201ENST00000282964 442 ntBASIC1.8□□□□□ -2.12
TNFSF9P41273 Y_RNA.4-201ENST00000362333 112 ntBASIC1.8□□□□□ -2.12
TNFSF9P41273 Y_RNA.238-201ENST00000364441 102 ntBASIC1.8□□□□□ -2.12
TNFSF9P41273 RNU6-1032P-201ENST00000384100 107 ntBASIC1.8□□□□□ -2.12
TNFSF9P41273 SNORA46.1-201ENST00000391069 153 ntBASIC1.8□□□□□ -2.12
TNFSF9P41273 AL356379.1-201ENST00000414105 126 ntBASIC1.8□□□□□ -2.12
TNFSF9P41273 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.8□□□□□ -2.12
TNFSF9P41273 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.8□□□□□ -2.12
TNFSF9P41273 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.8□□□□□ -2.12
TNFSF9P41273 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.8□□□□□ -2.12
TNFSF9P41273 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.8□□□□□ -2.12
TNFSF9P41273 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.8□□□□□ -2.12
TNFSF9P41273 UBE2FP3-201ENST00000436366 524 ntBASIC1.8□□□□□ -2.12
TNFSF9P41273 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.8□□□□□ -2.12
TNFSF9P41273 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.8□□□□□ -2.12
TNFSF9P41273 RPS3AP22-201ENST00000488297 769 ntBASIC1.8□□□□□ -2.12
TNFSF9P41273 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.8□□□□□ -2.12
TNFSF9P41273 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.8□□□□□ -2.12
TNFSF9P41273 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.8□□□□□ -2.12
TNFSF9P41273 RNU5B-3P-201ENST00000516601 115 ntBASIC1.8□□□□□ -2.12
TNFSF9P41273 RNU6-759P-201ENST00000516740 103 ntBASIC1.8□□□□□ -2.12
TNFSF9P41273 RNU6-914P-201ENST00000516749 109 ntBASIC1.8□□□□□ -2.12
TNFSF9P41273 RNU6-1315P-201ENST00000517187 99 ntBASIC1.8□□□□□ -2.12
TNFSF9P41273 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.8□□□□□ -2.12
TNFSF9P41273 ELOCP32-201ENST00000548625 324 ntBASIC1.8□□□□□ -2.12
TNFSF9P41273 AC009094.1-201ENST00000564443 426 ntBASIC1.8□□□□□ -2.12
TNFSF9P41273 MIR4498-201ENST00000577599 66 ntBASIC1.8□□□□□ -2.12
TNFSF9P41273 MIR4255-201ENST00000579351 72 ntBASIC1.8□□□□□ -2.12
TNFSF9P41273 AC078899.2-201ENST00000595282 212 ntBASIC1.8□□□□□ -2.12
TNFSF9P41273 AL031274.2-201ENST00000599419 203 ntBASIC1.8□□□□□ -2.12
TNFSF9P41273 AC093424.1-201ENST00000604999 338 ntBASIC1.8□□□□□ -2.12
TNFSF9P41273 AC087045.1-201ENST00000605856 382 ntBASIC1.8□□□□□ -2.12
TNFSF9P41273 MIR502-201ENST00000606349 86 ntBASIC1.8□□□□□ -2.12
TNFSF9P41273 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
TNFSF9P41273 AC006338.1-201ENST00000618453 749 ntBASIC1.8□□□□□ -2.12
TNFSF9P41273 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.8□□□□□ -2.12
TNFSF9P41273 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
TNFSF9P41273 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
TNFSF9P41273 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
TNFSF9P41273 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
TNFSF9P41273 MIR378A-201ENST00000362177 66 ntBASIC1.79□□□□□ -2.12
TNFSF9P41273 RNY4P24-201ENST00000362735 96 ntBASIC1.79□□□□□ -2.12
TNFSF9P41273 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
TNFSF9P41273 MIR518D-201ENST00000385014 87 ntBASIC1.79□□□□□ -2.12
TNFSF9P41273 MIR561-201ENST00000385216 97 ntBASIC1.79□□□□□ -2.12
TNFSF9P41273 MIR676-201ENST00000390702 67 ntBASIC1.79□□□□□ -2.12
TNFSF9P41273 RPS20P2-201ENST00000402520 389 ntBASIC1.79□□□□□ -2.12
TNFSF9P41273 FGF7P8-201ENST00000402994 292 ntBASIC1.79□□□□□ -2.12
TNFSF9P41273 MTCYBP36-201ENST00000404146 440 ntBASIC1.79□□□□□ -2.12
TNFSF9P41273 FTH1P15-201ENST00000406984 280 ntBASIC1.79□□□□□ -2.12
TNFSF9P41273 AC092809.3-201ENST00000415453 231 ntBASIC1.79□□□□□ -2.12
TNFSF9P41273 AC009518.2-201ENST00000418056 731 ntBASIC1.79□□□□□ -2.12
TNFSF9P41273 AC138623.1-201ENST00000418060 216 ntBASIC1.79□□□□□ -2.12
TNFSF9P41273 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.79□□□□□ -2.12
TNFSF9P41273 AC098592.1-201ENST00000419352 333 ntBASIC1.79□□□□□ -2.12
TNFSF9P41273 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.79□□□□□ -2.12
TNFSF9P41273 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.79□□□□□ -2.12
TNFSF9P41273 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.79□□□□□ -2.12
TNFSF9P41273 AL354941.1-201ENST00000438600 464 ntBASIC1.79□□□□□ -2.12
TNFSF9P41273 RNU7-125P-201ENST00000458760 62 ntBASIC1.79□□□□□ -2.12
TNFSF9P41273 AC117532.1-201ENST00000514638 323 ntBASIC1.79□□□□□ -2.12
TNFSF9P41273 RNU6-1129P-201ENST00000515964 104 ntBASIC1.79□□□□□ -2.12
TNFSF9P41273 RN7SKP287-201ENST00000516546 266 ntBASIC1.79□□□□□ -2.12
TNFSF9P41273 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.79□□□□□ -2.12
TNFSF9P41273 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.79□□□□□ -2.12
TNFSF9P41273 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.79□□□□□ -2.12
TNFSF9P41273 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.79□□□□□ -2.12
TNFSF9P41273 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.79□□□□□ -2.12
TNFSF9P41273 AC109446.2-201ENST00000567872 497 ntBASIC1.79□□□□□ -2.12
TNFSF9P41273 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.79□□□□□ -2.12
TNFSF9P41273 AL713866.2-201ENST00000603579 219 ntBASIC1.79□□□□□ -2.12
TNFSF9P41273 AC105129.3-201ENST00000605455 485 ntBASIC1.79□□□□□ -2.12
TNFSF9P41273 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.79□□□□□ -2.12
TNFSF9P41273 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.79□□□□□ -2.12
TNFSF9P41273 ZNF702P-202ENST00000434269 1966 ntBASIC1.79□□□□□ -2.12
TNFSF9P41273 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
TNFSF9P41273 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
TNFSF9P41273 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
TNFSF9P41273 RNY4P16-201ENST00000364768 94 ntBASIC1.78□□□□□ -2.12
TNFSF9P41273 SNORA25B-201ENST00000365507 128 ntBASIC1.78□□□□□ -2.12
TNFSF9P41273 RNU6-166P-201ENST00000384371 107 ntBASIC1.78□□□□□ -2.12
TNFSF9P41273 RNU6-809P-201ENST00000384461 107 ntBASIC1.78□□□□□ -2.12
TNFSF9P41273 Y_RNA.534-201ENST00000384599 112 ntBASIC1.78□□□□□ -2.12
TNFSF9P41273 SNORA40C-201ENST00000391285 128 ntBASIC1.78□□□□□ -2.12
TNFSF9P41273 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.78□□□□□ -2.12
TNFSF9P41273 AC010099.3-201ENST00000423896 409 ntBASIC1.78□□□□□ -2.12
TNFSF9P41273 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.78□□□□□ -2.12
TNFSF9P41273 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.78□□□□□ -2.12
TNFSF9P41273 MTND5P2-201ENST00000442927 1142 ntBASIC1.78□□□□□ -2.12
TNFSF9P41273 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.78□□□□□ -2.12
TNFSF9P41273 AC012308.1-201ENST00000451232 178 ntBASIC1.78□□□□□ -2.12
TNFSF9P41273 ZNF114P1-201ENST00000453500 292 ntBASIC1.78□□□□□ -2.12
TNFSF9P41273 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.78□□□□□ -2.12
TNFSF9P41273 AC116347.2-201ENST00000514912 523 ntBASIC1.78□□□□□ -2.12
TNFSF9P41273 RNU6-1053P-201ENST00000515930 101 ntBASIC1.78□□□□□ -2.12
TNFSF9P41273 RNU6-1092P-201ENST00000516955 87 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms