Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 MED28P2-201ENST00000475771 317 ntBASIC2.82□□□□□ -1.96
HADHAP40939 RN7SL297P-201ENST00000483161 293 ntBASIC2.82□□□□□ -1.96
HADHAP40939 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.82□□□□□ -1.96
HADHAP40939 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.82□□□□□ -1.96
HADHAP40939 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.82□□□□□ -1.96
HADHAP40939 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
HADHAP40939 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.82□□□□□ -1.96
HADHAP40939 EIF1P4-201ENST00000572664 335 ntBASIC2.82□□□□□ -1.96
HADHAP40939 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.82□□□□□ -1.96
HADHAP40939 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.82□□□□□ -1.96
HADHAP40939 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.82□□□□□ -1.96
HADHAP40939 Z82243.1-201ENST00000609432 473 ntBASIC2.82□□□□□ -1.96
HADHAP40939 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
HADHAP40939 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
HADHAP40939 AC010378.1-201ENST00000619270 362 ntBASIC2.82□□□□□ -1.96
HADHAP40939 AC026585.1-201ENST00000619582 524 ntBASIC2.82□□□□□ -1.96
HADHAP40939 AC068137.4-201ENST00000638485 296 ntBASIC2.82□□□□□ -1.96
HADHAP40939 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HADHAP40939 MTND4P27-201ENST00000450813 1354 ntBASIC2.82□□□□□ -1.96
HADHAP40939 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.82□□□□□ -1.96
HADHAP40939 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.82□□□□□ -1.96
HADHAP40939 AL365361.1-201ENST00000566942 3481 ntBASIC2.82□□□□□ -1.96
HADHAP40939 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.82□□□□□ -1.96
HADHAP40939 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.82□□□□□ -1.96
HADHAP40939 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.81□□□□□ -1.96
HADHAP40939 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HADHAP40939 RNU4-75P-201ENST00000364621 146 ntBASIC2.81□□□□□ -1.96
HADHAP40939 RNU6-843P-201ENST00000384454 104 ntBASIC2.81□□□□□ -1.96
HADHAP40939 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
HADHAP40939 AC068050.1-201ENST00000394891 380 ntBASIC2.81□□□□□ -1.96
HADHAP40939 SNORA11.2-201ENST00000408318 127 ntBASIC2.81□□□□□ -1.96
HADHAP40939 U6atac.2-201ENST00000408644 118 ntBASIC2.81□□□□□ -1.96
HADHAP40939 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.81□□□□□ -1.96
HADHAP40939 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.81□□□□□ -1.96
HADHAP40939 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.81□□□□□ -1.96
HADHAP40939 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.81□□□□□ -1.96
HADHAP40939 PRPS1P1-201ENST00000445305 876 ntBASIC2.81□□□□□ -1.96
HADHAP40939 AC104389.3-201ENST00000445629 235 ntBASIC2.81□□□□□ -1.96
HADHAP40939 EEF1B2P7-201ENST00000451177 676 ntBASIC2.81□□□□□ -1.96
HADHAP40939 RNU7-180P-201ENST00000459240 63 ntBASIC2.81□□□□□ -1.96
HADHAP40939 AP001324.2-201ENST00000461163 319 ntBASIC2.81□□□□□ -1.96
HADHAP40939 RPS29P26-201ENST00000477483 171 ntBASIC2.81□□□□□ -1.96
HADHAP40939 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.81□□□□□ -1.96
HADHAP40939 RNU2-69P-201ENST00000516061 100 ntBASIC2.81□□□□□ -1.96
HADHAP40939 RNA5SP367-201ENST00000516557 118 ntBASIC2.81□□□□□ -1.96
HADHAP40939 Y_RNA.687-201ENST00000516558 91 ntBASIC2.81□□□□□ -1.96
HADHAP40939 MTND4P7-201ENST00000523876 130 ntBASIC2.81□□□□□ -1.96
HADHAP40939 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.81□□□□□ -1.96
HADHAP40939 BNIP3P30-201ENST00000601184 574 ntBASIC2.81□□□□□ -1.96
HADHAP40939 AC008121.1-201ENST00000603244 268 ntBASIC2.81□□□□□ -1.96
HADHAP40939 AC007621.1-201ENST00000604544 437 ntBASIC2.81□□□□□ -1.96
HADHAP40939 MIR6852-201ENST00000621699 66 ntBASIC2.81□□□□□ -1.96
HADHAP40939 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.81□□□□□ -1.96
HADHAP40939 AC080128.1-201ENST00000474389 1917 ntBASIC2.81□□□□□ -1.96
HADHAP40939 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
HADHAP40939 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.81□□□□□ -1.96
HADHAP40939 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HADHAP40939 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.81□□□□□ -1.96
HADHAP40939 Z82195.2-201ENST00000612348 18351 ntBASIC2.81□□□□□ -1.96
HADHAP40939 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.8□□□□□ -1.96
HADHAP40939 RNU6-858P-201ENST00000362436 107 ntBASIC2.8□□□□□ -1.96
HADHAP40939 VTRNA1-1-201ENST00000363120 99 ntBASIC2.8□□□□□ -1.96
HADHAP40939 SNORA5B-201ENST00000363786 132 ntBASIC2.8□□□□□ -1.96
HADHAP40939 MIR592-201ENST00000384959 97 ntBASIC2.8□□□□□ -1.96
HADHAP40939 OR9R1P-201ENST00000412200 877 ntBASIC2.8□□□□□ -1.96
HADHAP40939 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.8□□□□□ -1.96
HADHAP40939 CYCSP33-201ENST00000414485 327 ntBASIC2.8□□□□□ -1.96
HADHAP40939 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
HADHAP40939 MTCYBP8-201ENST00000422855 651 ntBASIC2.8□□□□□ -1.96
HADHAP40939 BX276092.3-201ENST00000424182 230 ntBASIC2.8□□□□□ -1.96
HADHAP40939 RPL7P54-201ENST00000438336 674 ntBASIC2.8□□□□□ -1.96
HADHAP40939 MTND1P34-201ENST00000438556 671 ntBASIC2.8□□□□□ -1.96
HADHAP40939 CALM1P1-201ENST00000442082 433 ntBASIC2.8□□□□□ -1.96
HADHAP40939 FDX1P2-201ENST00000450769 375 ntBASIC2.8□□□□□ -1.96
HADHAP40939 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.8□□□□□ -1.96
HADHAP40939 AC003982.1-202ENST00000469928 248 ntBASIC2.8□□□□□ -1.96
HADHAP40939 AC091435.1-201ENST00000505442 584 ntBASIC2.8□□□□□ -1.96
HADHAP40939 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.8□□□□□ -1.96
HADHAP40939 RNU6-720P-201ENST00000516363 108 ntBASIC2.8□□□□□ -1.96
HADHAP40939 Y_RNA.693-201ENST00000516641 110 ntBASIC2.8□□□□□ -1.96
HADHAP40939 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.8□□□□□ -1.96
HADHAP40939 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.8□□□□□ -1.96
HADHAP40939 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.8□□□□□ -1.96
HADHAP40939 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.8□□□□□ -1.96
HADHAP40939 AC079598.5-201ENST00000547460 117 ntBASIC2.8□□□□□ -1.96
HADHAP40939 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.8□□□□□ -1.96
HADHAP40939 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.8□□□□□ -1.96
HADHAP40939 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.8□□□□□ -1.96
HADHAP40939 ZNF861P-201ENST00000588126 639 ntBASIC2.8□□□□□ -1.96
HADHAP40939 AC011890.2-201ENST00000613393 294 ntBASIC2.8□□□□□ -1.96
HADHAP40939 Z69720.2-201ENST00000624755 279 ntBASIC2.8□□□□□ -1.96
HADHAP40939 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.79□□□□□ -1.96
HADHAP40939 AL354685.2-201ENST00000448218 1447 ntBASIC2.79□□□□□ -1.96
HADHAP40939 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
HADHAP40939 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
HADHAP40939 Y_RNA.324-201ENST00000365165 102 ntBASIC2.79□□□□□ -1.96
HADHAP40939 MIR181A1-201ENST00000385026 110 ntBASIC2.79□□□□□ -1.96
HADHAP40939 AL606923.1-201ENST00000406616 190 ntBASIC2.79□□□□□ -1.96
HADHAP40939 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.79□□□□□ -1.96
HADHAP40939 RNU6-1328P-201ENST00000410938 106 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms