Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 SNORA37-201ENST00000384504 129 ntBASIC4.42□□□□□ -1.7
GRIK1P39086 SNORD78.2-201ENST00000391076 69 ntBASIC4.42□□□□□ -1.7
GRIK1P39086 RNU6-817P-201ENST00000391083 104 ntBASIC4.42□□□□□ -1.7
GRIK1P39086 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
GRIK1P39086 RN7SKP27-201ENST00000410684 333 ntBASIC4.42□□□□□ -1.7
GRIK1P39086 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.42□□□□□ -1.7
GRIK1P39086 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.42□□□□□ -1.7
GRIK1P39086 MTATP6P4-201ENST00000427725 675 ntBASIC4.42□□□□□ -1.7
GRIK1P39086 AC005002.2-201ENST00000438228 269 ntBASIC4.42□□□□□ -1.7
GRIK1P39086 TOMM22P6-201ENST00000465035 409 ntBASIC4.42□□□□□ -1.7
GRIK1P39086 RPL30P1-201ENST00000488676 339 ntBASIC4.42□□□□□ -1.7
GRIK1P39086 RPS27P26-201ENST00000494583 239 ntBASIC4.42□□□□□ -1.7
GRIK1P39086 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.42□□□□□ -1.7
GRIK1P39086 SNORD116-25-201ENST00000516517 92 ntBASIC4.42□□□□□ -1.7
GRIK1P39086 AC091144.1-201ENST00000519573 138 ntBASIC4.42□□□□□ -1.7
GRIK1P39086 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.42□□□□□ -1.7
GRIK1P39086 RPL21P9-201ENST00000556149 474 ntBASIC4.42□□□□□ -1.7
GRIK1P39086 MTND6P33-201ENST00000571794 183 ntBASIC4.42□□□□□ -1.7
GRIK1P39086 AC022655.2-201ENST00000577280 318 ntBASIC4.42□□□□□ -1.7
GRIK1P39086 FAM60BP-201ENST00000578364 658 ntBASIC4.42□□□□□ -1.7
GRIK1P39086 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.42□□□□□ -1.7
GRIK1P39086 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.42□□□□□ -1.7
GRIK1P39086 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.42□□□□□ -1.7
GRIK1P39086 MIR7154-201ENST00000620673 73 ntBASIC4.42□□□□□ -1.7
GRIK1P39086 AL360181.4-201ENST00000621752 134 ntBASIC4.42□□□□□ -1.7
GRIK1P39086 RNA5SP196-201ENST00000625967 102 ntBASIC4.42□□□□□ -1.7
GRIK1P39086 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.42□□□□□ -1.7
GRIK1P39086 MTND1P7-201ENST00000632801 297 ntBASIC4.42□□□□□ -1.7
GRIK1P39086 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
GRIK1P39086 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
GRIK1P39086 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
GRIK1P39086 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
GRIK1P39086 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
GRIK1P39086 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
GRIK1P39086 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
GRIK1P39086 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.41□□□□□ -1.7
GRIK1P39086 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.41□□□□□ -1.7
GRIK1P39086 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
GRIK1P39086 AC018529.3-201ENST00000624212 2254 ntBASIC4.41□□□□□ -1.7
GRIK1P39086 RNA5SP388-201ENST00000362584 119 ntBASIC4.41□□□□□ -1.7
GRIK1P39086 Y_RNA.215-201ENST00000364204 112 ntBASIC4.41□□□□□ -1.7
GRIK1P39086 Y_RNA.218-201ENST00000364218 104 ntBASIC4.41□□□□□ -1.7
GRIK1P39086 RNA5SP130-201ENST00000364431 114 ntBASIC4.41□□□□□ -1.7
GRIK1P39086 Y_RNA.273-201ENST00000364703 102 ntBASIC4.41□□□□□ -1.7
GRIK1P39086 RNU6-1325P-201ENST00000364905 105 ntBASIC4.41□□□□□ -1.7
GRIK1P39086 RNU6-1289P-201ENST00000384431 106 ntBASIC4.41□□□□□ -1.7
GRIK1P39086 Y_RNA.569-201ENST00000384749 103 ntBASIC4.41□□□□□ -1.7
GRIK1P39086 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.41□□□□□ -1.7
GRIK1P39086 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
GRIK1P39086 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.41□□□□□ -1.7
GRIK1P39086 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.41□□□□□ -1.7
GRIK1P39086 RPL26P6-201ENST00000440913 438 ntBASIC4.41□□□□□ -1.7
GRIK1P39086 AC008267.6-201ENST00000441664 139 ntBASIC4.41□□□□□ -1.7
GRIK1P39086 PIGFP3-201ENST00000441918 722 ntBASIC4.41□□□□□ -1.7
GRIK1P39086 IFNA11P-201ENST00000446352 526 ntBASIC4.41□□□□□ -1.7
GRIK1P39086 AC009237.7-201ENST00000447357 229 ntBASIC4.41□□□□□ -1.7
GRIK1P39086 RNU6-953P-201ENST00000459154 107 ntBASIC4.41□□□□□ -1.7
GRIK1P39086 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
GRIK1P39086 RN7SKP258-201ENST00000517151 304 ntBASIC4.41□□□□□ -1.7
GRIK1P39086 SNORA31.22-201ENST00000517204 135 ntBASIC4.41□□□□□ -1.7
GRIK1P39086 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.41□□□□□ -1.7
GRIK1P39086 AC103996.1-201ENST00000555468 102 ntBASIC4.41□□□□□ -1.7
GRIK1P39086 AC106785.1-201ENST00000565935 262 ntBASIC4.41□□□□□ -1.7
GRIK1P39086 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
GRIK1P39086 BDH2P1-201ENST00000602288 736 ntBASIC4.41□□□□□ -1.7
GRIK1P39086 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.41□□□□□ -1.7
GRIK1P39086 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
GRIK1P39086 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
GRIK1P39086 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
GRIK1P39086 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
GRIK1P39086 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.41□□□□□ -1.7
GRIK1P39086 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
GRIK1P39086 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
GRIK1P39086 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
GRIK1P39086 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
GRIK1P39086 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
GRIK1P39086 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
GRIK1P39086 Y_RNA.435-201ENST00000384095 112 ntBASIC4.4□□□□□ -1.71
GRIK1P39086 SNORD63-201ENST00000384262 68 ntBASIC4.4□□□□□ -1.71
GRIK1P39086 RPL23AP48-201ENST00000406913 488 ntBASIC4.4□□□□□ -1.71
GRIK1P39086 RNU6-628P-201ENST00000410675 107 ntBASIC4.4□□□□□ -1.71
GRIK1P39086 AL356095.1-201ENST00000417217 199 ntBASIC4.4□□□□□ -1.71
GRIK1P39086 AL512844.2-201ENST00000433990 593 ntBASIC4.4□□□□□ -1.71
GRIK1P39086 Z82188.1-201ENST00000436709 154 ntBASIC4.4□□□□□ -1.71
GRIK1P39086 RNA5SP246-201ENST00000458909 119 ntBASIC4.4□□□□□ -1.71
GRIK1P39086 RPS26P21-201ENST00000475397 348 ntBASIC4.4□□□□□ -1.71
GRIK1P39086 RN7SL604P-201ENST00000492589 296 ntBASIC4.4□□□□□ -1.71
GRIK1P39086 AC091959.1-201ENST00000495857 238 ntBASIC4.4□□□□□ -1.71
GRIK1P39086 AC078918.1-201ENST00000498515 228 ntBASIC4.4□□□□□ -1.71
GRIK1P39086 ANXA2P1-201ENST00000505539 926 ntBASIC4.4□□□□□ -1.71
GRIK1P39086 PDCD5P2-201ENST00000507570 312 ntBASIC4.4□□□□□ -1.71
GRIK1P39086 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.4□□□□□ -1.71
GRIK1P39086 RNU6-840P-201ENST00000517275 65 ntBASIC4.4□□□□□ -1.71
GRIK1P39086 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC4.4□□□□□ -1.71
GRIK1P39086 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.4□□□□□ -1.71
GRIK1P39086 MIR6867-201ENST00000610636 67 ntBASIC4.4□□□□□ -1.71
GRIK1P39086 AC008785.1-201ENST00000624475 456 ntBASIC4.4□□□□□ -1.71
GRIK1P39086 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
GRIK1P39086 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
GRIK1P39086 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms