Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 AC026271.5-201ENST00000577873 130 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 MIR4287-201ENST00000579398 78 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 AC009974.1-201ENST00000608881 455 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 MIR6078-201ENST00000611069 100 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 AC083806.3-201ENST00000614016 455 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 AL359547.2-201ENST00000615810 418 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 AC007792.1-201ENST00000623023 402 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.73□□□□□ -2.13
BRCA1P38398 RNU6-942P-201ENST00000363002 107 ntBASIC1.72□□□□□ -2.13
BRCA1P38398 SNORA4.3-201ENST00000365564 137 ntBASIC1.72□□□□□ -2.13
BRCA1P38398 RNU6-166P-201ENST00000384371 107 ntBASIC1.72□□□□□ -2.13
BRCA1P38398 MIR598-201ENST00000384868 97 ntBASIC1.72□□□□□ -2.13
BRCA1P38398 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
BRCA1P38398 BTF3L4P3-201ENST00000418879 476 ntBASIC1.72□□□□□ -2.13
BRCA1P38398 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.72□□□□□ -2.13
BRCA1P38398 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.72□□□□□ -2.13
BRCA1P38398 AC104651.1-201ENST00000427559 735 ntBASIC1.72□□□□□ -2.13
BRCA1P38398 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.72□□□□□ -2.13
BRCA1P38398 USP9YP24-201ENST00000434374 697 ntBASIC1.72□□□□□ -2.13
BRCA1P38398 USP9YP17-201ENST00000444617 696 ntBASIC1.72□□□□□ -2.13
BRCA1P38398 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.72□□□□□ -2.13
BRCA1P38398 AP000542.1-201ENST00000448473 371 ntBASIC1.72□□□□□ -2.13
BRCA1P38398 RPL7P43-201ENST00000478876 753 ntBASIC1.72□□□□□ -2.13
BRCA1P38398 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.72□□□□□ -2.13
BRCA1P38398 MTCYBP43-201ENST00000513621 740 ntBASIC1.72□□□□□ -2.13
BRCA1P38398 MIR1273C-201ENST00000578669 77 ntBASIC1.72□□□□□ -2.13
BRCA1P38398 AC105129.3-201ENST00000605455 485 ntBASIC1.72□□□□□ -2.13
BRCA1P38398 AC126118.1-201ENST00000607744 628 ntBASIC1.72□□□□□ -2.13
BRCA1P38398 AP000240.1-201ENST00000609910 452 ntBASIC1.72□□□□□ -2.13
BRCA1P38398 AC006386.1-201ENST00000619436 415 ntBASIC1.72□□□□□ -2.13
BRCA1P38398 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.72□□□□□ -2.13
BRCA1P38398 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.72□□□□□ -2.13
BRCA1P38398 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.71□□□□□ -2.14
BRCA1P38398 EIF4EP4-201ENST00000424916 578 ntBASIC1.71□□□□□ -2.14
BRCA1P38398 AC092648.1-201ENST00000425870 423 ntBASIC1.71□□□□□ -2.14
BRCA1P38398 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.71□□□□□ -2.14
BRCA1P38398 RPS6P15-201ENST00000431996 751 ntBASIC1.71□□□□□ -2.14
BRCA1P38398 RPL37P21-201ENST00000435890 276 ntBASIC1.71□□□□□ -2.14
BRCA1P38398 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.71□□□□□ -2.14
BRCA1P38398 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.71□□□□□ -2.14
BRCA1P38398 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.71□□□□□ -2.14
BRCA1P38398 RNU6-1183P-201ENST00000517054 60 ntBASIC1.71□□□□□ -2.14
BRCA1P38398 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.71□□□□□ -2.14
BRCA1P38398 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.71□□□□□ -2.14
BRCA1P38398 OR4R1P-201ENST00000529879 463 ntBASIC1.71□□□□□ -2.14
BRCA1P38398 MTND4P33-201ENST00000556706 766 ntBASIC1.71□□□□□ -2.14
BRCA1P38398 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.71□□□□□ -2.14
BRCA1P38398 AC007229.1-201ENST00000590455 412 ntBASIC1.71□□□□□ -2.14
BRCA1P38398 AC034229.4-201ENST00000607861 441 ntBASIC1.71□□□□□ -2.14
BRCA1P38398 AC096772.1-201ENST00000609146 564 ntBASIC1.71□□□□□ -2.14
BRCA1P38398 U6.42-201ENST00000618440 107 ntBASIC1.71□□□□□ -2.14
BRCA1P38398 AC024581.2-201ENST00000619986 252 ntBASIC1.71□□□□□ -2.14
BRCA1P38398 ZNF29P-201ENST00000225587 168 ntBASIC1.71□□□□□ -2.14
BRCA1P38398 RNU6-858P-201ENST00000362436 107 ntBASIC1.71□□□□□ -2.14
BRCA1P38398 RNU5A-8P-201ENST00000364102 114 ntBASIC1.71□□□□□ -2.14
BRCA1P38398 RNU6-83P-201ENST00000384568 112 ntBASIC1.71□□□□□ -2.14
BRCA1P38398 AL033519.2-201ENST00000403958 392 ntBASIC1.71□□□□□ -2.14
BRCA1P38398 U3.40-201ENST00000408706 208 ntBASIC1.71□□□□□ -2.14
BRCA1P38398 RNU2-39P-201ENST00000410604 198 ntBASIC1.71□□□□□ -2.14
BRCA1P38398 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.71□□□□□ -2.14
BRCA1P38398 AL445669.1-201ENST00000426743 755 ntBASIC1.71□□□□□ -2.14
BRCA1P38398 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.71□□□□□ -2.14
BRCA1P38398 MTCO3P5-201ENST00000433620 714 ntBASIC1.71□□□□□ -2.14
BRCA1P38398 LARP1BP3-201ENST00000437229 869 ntBASIC1.71□□□□□ -2.14
BRCA1P38398 PGBD4P3-201ENST00000440731 581 ntBASIC1.71□□□□□ -2.14
BRCA1P38398 AL078601.1-201ENST00000444542 271 ntBASIC1.71□□□□□ -2.14
BRCA1P38398 OR6C5P-201ENST00000452388 923 ntBASIC1.71□□□□□ -2.14
BRCA1P38398 RNA5SP233-201ENST00000459153 113 ntBASIC1.71□□□□□ -2.14
BRCA1P38398 AL713866.2-201ENST00000603579 219 ntBASIC1.71□□□□□ -2.14
BRCA1P38398 AC092104.1-201ENST00000497346 1441 ntBASIC1.7□□□□□ -2.14
BRCA1P38398 AL596028.1-201ENST00000326971 197 ntBASIC1.7□□□□□ -2.14
BRCA1P38398 RNU5E-1-201ENST00000362477 120 ntBASIC1.7□□□□□ -2.14
BRCA1P38398 Y_RNA.302-201ENST00000364997 102 ntBASIC1.7□□□□□ -2.14
BRCA1P38398 MIR518D-201ENST00000385014 87 ntBASIC1.7□□□□□ -2.14
BRCA1P38398 AL512604.1-201ENST00000404812 257 ntBASIC1.7□□□□□ -2.14
BRCA1P38398 FCF1P10-201ENST00000407590 479 ntBASIC1.7□□□□□ -2.14
BRCA1P38398 CYCSP48-201ENST00000417124 323 ntBASIC1.7□□□□□ -2.14
BRCA1P38398 TXNL1P1-201ENST00000429528 554 ntBASIC1.7□□□□□ -2.14
BRCA1P38398 AC084290.1-201ENST00000434995 374 ntBASIC1.7□□□□□ -2.14
BRCA1P38398 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.7□□□□□ -2.14
BRCA1P38398 AC006512.1-201ENST00000468816 291 ntBASIC1.7□□□□□ -2.14
BRCA1P38398 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.7□□□□□ -2.14
BRCA1P38398 SNORA25.11-201ENST00000515935 105 ntBASIC1.7□□□□□ -2.14
BRCA1P38398 AC009902.1-201ENST00000519351 183 ntBASIC1.7□□□□□ -2.14
BRCA1P38398 MIR4999-201ENST00000585029 91 ntBASIC1.7□□□□□ -2.14
BRCA1P38398 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
BRCA1P38398 MIR15A-201ENST00000607334 83 ntBASIC1.7□□□□□ -2.14
BRCA1P38398 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.7□□□□□ -2.14
BRCA1P38398 AC068944.2-201ENST00000610373 403 ntBASIC1.7□□□□□ -2.14
BRCA1P38398 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.7□□□□□ -2.14
BRCA1P38398 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.69□□□□□ -2.14
BRCA1P38398 MIR620-201ENST00000385232 95 ntBASIC1.69□□□□□ -2.14
BRCA1P38398 SUMO2P12-201ENST00000405924 140 ntBASIC1.69□□□□□ -2.14
BRCA1P38398 MIR1304-201ENST00000408243 91 ntBASIC1.69□□□□□ -2.14
BRCA1P38398 RNU2-63P-201ENST00000410792 194 ntBASIC1.69□□□□□ -2.14
BRCA1P38398 MTCO2P23-201ENST00000425216 680 ntBASIC1.69□□□□□ -2.14
BRCA1P38398 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.69□□□□□ -2.14
BRCA1P38398 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.69□□□□□ -2.14
BRCA1P38398 CR769776.1-201ENST00000441254 787 ntBASIC1.69□□□□□ -2.14
BRCA1P38398 NEFMP1-201ENST00000443423 1006 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms