Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
CD40LGP29965 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CD40LGP29965 RNU6-621P-201ENST00000364752 109 ntBASIC1.27□□□□□ -2.21
CD40LGP29965 RNA5SP190-201ENST00000365222 118 ntBASIC1.27□□□□□ -2.21
CD40LGP29965 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
CD40LGP29965 Y_RNA.534-201ENST00000384599 112 ntBASIC1.27□□□□□ -2.21
CD40LGP29965 MIR758-201ENST00000390227 88 ntBASIC1.27□□□□□ -2.21
CD40LGP29965 SNORA67.5-201ENST00000391036 107 ntBASIC1.27□□□□□ -2.21
CD40LGP29965 CBX3P9-201ENST00000402326 552 ntBASIC1.27□□□□□ -2.21
CD40LGP29965 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.27□□□□□ -2.21
CD40LGP29965 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.27□□□□□ -2.21
CD40LGP29965 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.27□□□□□ -2.21
CD40LGP29965 AL591806.2-201ENST00000433122 173 ntBASIC1.27□□□□□ -2.21
CD40LGP29965 AC012308.1-201ENST00000451232 178 ntBASIC1.27□□□□□ -2.21
CD40LGP29965 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.27□□□□□ -2.21
CD40LGP29965 RNA5SP445-201ENST00000515889 115 ntBASIC1.27□□□□□ -2.21
CD40LGP29965 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.27□□□□□ -2.21
CD40LGP29965 AC068338.1-201ENST00000565567 176 ntBASIC1.27□□□□□ -2.21
CD40LGP29965 MIR4255-201ENST00000579351 72 ntBASIC1.27□□□□□ -2.21
CD40LGP29965 MIR4298-201ENST00000584380 73 ntBASIC1.27□□□□□ -2.21
CD40LGP29965 BNIP3P26-201ENST00000600827 554 ntBASIC1.27□□□□□ -2.21
CD40LGP29965 MTATP6P2-201ENST00000603319 678 ntBASIC1.27□□□□□ -2.21
CD40LGP29965 AC007363.1-201ENST00000604736 620 ntBASIC1.27□□□□□ -2.21
CD40LGP29965 AC123912.5-201ENST00000605470 343 ntBASIC1.27□□□□□ -2.21
CD40LGP29965 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.27□□□□□ -2.21
CD40LGP29965 AC124016.2-201ENST00000610058 665 ntBASIC1.27□□□□□ -2.21
CD40LGP29965 MIR6715A-201ENST00000615929 79 ntBASIC1.27□□□□□ -2.21
CD40LGP29965 AC091812.1-201ENST00000432235 1948 ntBASIC1.27□□□□□ -2.21
CD40LGP29965 RNU6-1210P-201ENST00000363775 107 ntBASIC1.26□□□□□ -2.21
CD40LGP29965 RNU6-944P-201ENST00000364023 107 ntBASIC1.26□□□□□ -2.21
CD40LGP29965 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
CD40LGP29965 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CD40LGP29965 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
CD40LGP29965 MIR29B2-201ENST00000385055 81 ntBASIC1.26□□□□□ -2.21
CD40LGP29965 SNORA67.6-201ENST00000391093 99 ntBASIC1.26□□□□□ -2.21
CD40LGP29965 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.26□□□□□ -2.21
CD40LGP29965 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.26□□□□□ -2.21
CD40LGP29965 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.26□□□□□ -2.21
CD40LGP29965 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.26□□□□□ -2.21
CD40LGP29965 snoU13.23-201ENST00000458863 104 ntBASIC1.26□□□□□ -2.21
CD40LGP29965 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC1.26□□□□□ -2.21
CD40LGP29965 MTCYBP40-201ENST00000509390 1135 ntBASIC1.26□□□□□ -2.21
CD40LGP29965 SNORA31.17-201ENST00000516953 127 ntBASIC1.26□□□□□ -2.21
CD40LGP29965 RNU6-1315P-201ENST00000517187 99 ntBASIC1.26□□□□□ -2.21
CD40LGP29965 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.26□□□□□ -2.21
CD40LGP29965 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CD40LGP29965 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.26□□□□□ -2.21
CD40LGP29965 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.26□□□□□ -2.21
CD40LGP29965 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.26□□□□□ -2.21
CD40LGP29965 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.26□□□□□ -2.21
CD40LGP29965 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.26□□□□□ -2.21
CD40LGP29965 TRAV32-201ENST00000553993 340 ntBASIC1.26□□□□□ -2.21
CD40LGP29965 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.26□□□□□ -2.21
CD40LGP29965 MTND3P13-201ENST00000574391 343 ntBASIC1.26□□□□□ -2.21
CD40LGP29965 AL391813.2-201ENST00000609113 322 ntBASIC1.26□□□□□ -2.21
CD40LGP29965 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CD40LGP29965 RNU4-51P-201ENST00000364206 140 ntBASIC1.25□□□□□ -2.21
CD40LGP29965 MIR1323-201ENST00000408090 73 ntBASIC1.25□□□□□ -2.21
CD40LGP29965 MIR320C1-201ENST00000408566 88 ntBASIC1.25□□□□□ -2.21
CD40LGP29965 RN7SKP266-201ENST00000410232 287 ntBASIC1.25□□□□□ -2.21
CD40LGP29965 RNU6-1025P-201ENST00000410629 104 ntBASIC1.25□□□□□ -2.21
CD40LGP29965 UBE2V1P10-201ENST00000414685 269 ntBASIC1.25□□□□□ -2.21
CD40LGP29965 USP9YP11-201ENST00000427537 717 ntBASIC1.25□□□□□ -2.21
CD40LGP29965 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CD40LGP29965 snoU13.14-201ENST00000459372 104 ntBASIC1.25□□□□□ -2.21
CD40LGP29965 AC093259.1-201ENST00000509755 300 ntBASIC1.25□□□□□ -2.21
CD40LGP29965 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.25□□□□□ -2.21
CD40LGP29965 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.25□□□□□ -2.21
CD40LGP29965 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CD40LGP29965 SUB1P4-201ENST00000566062 339 ntBASIC1.25□□□□□ -2.21
CD40LGP29965 AC002400.1-201ENST00000569310 726 ntBASIC1.25□□□□□ -2.21
CD40LGP29965 AC092574.1-201ENST00000609771 420 ntBASIC1.25□□□□□ -2.21
CD40LGP29965 AC006338.1-201ENST00000618453 749 ntBASIC1.25□□□□□ -2.21
CD40LGP29965 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
CD40LGP29965 AP003476.1-201ENST00000623984 516 ntBASIC1.25□□□□□ -2.21
CD40LGP29965 AC099654.8-201ENST00000637757 681 ntBASIC1.25□□□□□ -2.21
CD40LGP29965 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
CD40LGP29965 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.25□□□□□ -2.21
CD40LGP29965 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
CD40LGP29965 SNORA63.3-201ENST00000362682 132 ntBASIC1.24□□□□□ -2.21
CD40LGP29965 RNU5A-8P-201ENST00000364102 114 ntBASIC1.24□□□□□ -2.21
CD40LGP29965 RNU6-622P-201ENST00000384272 103 ntBASIC1.24□□□□□ -2.21
CD40LGP29965 AC016831.2-201ENST00000417179 352 ntBASIC1.24□□□□□ -2.21
CD40LGP29965 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.24□□□□□ -2.21
CD40LGP29965 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.24□□□□□ -2.21
CD40LGP29965 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.24□□□□□ -2.21
CD40LGP29965 AC108059.3-201ENST00000456388 214 ntBASIC1.24□□□□□ -2.21
CD40LGP29965 AC132942.1-201ENST00000486753 483 ntBASIC1.24□□□□□ -2.21
CD40LGP29965 AC010409.1-201ENST00000487382 476 ntBASIC1.24□□□□□ -2.21
CD40LGP29965 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.24□□□□□ -2.21
CD40LGP29965 RN7SKP179-201ENST00000516126 217 ntBASIC1.24□□□□□ -2.21
CD40LGP29965 SNORA31.24-201ENST00000517232 57 ntBASIC1.24□□□□□ -2.21
CD40LGP29965 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.24□□□□□ -2.21
CD40LGP29965 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.24□□□□□ -2.21
CD40LGP29965 CR383656.8-201ENST00000549046 145 ntBASIC1.24□□□□□ -2.21
CD40LGP29965 AC005668.1-201ENST00000571142 476 ntBASIC1.24□□□□□ -2.21
CD40LGP29965 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.24□□□□□ -2.21
CD40LGP29965 AL353997.5-201ENST00000618886 171 ntBASIC1.24□□□□□ -2.21
CD40LGP29965 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.24□□□□□ -2.21
CD40LGP29965 AC008993.2-201ENST00000631744 806 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms