Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.11□□□□□ -1.91
TNFSF4P23510 RNU2-23P-201ENST00000410545 195 ntBASIC3.11□□□□□ -1.91
TNFSF4P23510 RN7SKP220-201ENST00000410611 288 ntBASIC3.11□□□□□ -1.91
TNFSF4P23510 RNU6-325P-201ENST00000411132 105 ntBASIC3.11□□□□□ -1.91
TNFSF4P23510 MTND1P11-201ENST00000456661 876 ntBASIC3.11□□□□□ -1.91
TNFSF4P23510 AC091179.1-201ENST00000461606 579 ntBASIC3.11□□□□□ -1.91
TNFSF4P23510 AC112771.1-201ENST00000463581 102 ntBASIC3.11□□□□□ -1.91
TNFSF4P23510 AC103851.1-201ENST00000506833 274 ntBASIC3.11□□□□□ -1.91
TNFSF4P23510 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.11□□□□□ -1.91
TNFSF4P23510 RN7SKP83-201ENST00000516512 178 ntBASIC3.11□□□□□ -1.91
TNFSF4P23510 Y_RNA.691-201ENST00000516611 103 ntBASIC3.11□□□□□ -1.91
TNFSF4P23510 RNU6-612P-201ENST00000516909 102 ntBASIC3.11□□□□□ -1.91
TNFSF4P23510 AC009812.2-201ENST00000517657 457 ntBASIC3.11□□□□□ -1.91
TNFSF4P23510 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.11□□□□□ -1.91
TNFSF4P23510 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.11□□□□□ -1.91
TNFSF4P23510 AC034105.4-201ENST00000568304 277 ntBASIC3.11□□□□□ -1.91
TNFSF4P23510 AL137843.1-201ENST00000605078 385 ntBASIC3.11□□□□□ -1.91
TNFSF4P23510 RNVU1-4-201ENST00000612985 164 ntBASIC3.11□□□□□ -1.91
TNFSF4P23510 AP003355.3-201ENST00000623465 114 ntBASIC3.11□□□□□ -1.91
TNFSF4P23510 TPTEP1-208ENST00000636884 213 ntBASIC3.11□□□□□ -1.91
TNFSF4P23510 MIR7153-201ENST00000637758 57 ntBASIC3.11□□□□□ -1.91
TNFSF4P23510 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
TNFSF4P23510 AL732372.2-225ENST00000642124 456 ntBASIC3.11□□□□□ -1.91
TNFSF4P23510 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TNFSF4P23510 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.11□□□□□ -1.91
TNFSF4P23510 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.11□□□□□ -1.91
TNFSF4P23510 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TNFSF4P23510 AC006504.1-201ENST00000562493 3666 ntBASIC3.11□□□□□ -1.91
TNFSF4P23510 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
TNFSF4P23510 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.1□□□□□ -1.91
TNFSF4P23510 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TNFSF4P23510 OR56A5-201ENST00000340110 738 ntBASIC3.1□□□□□ -1.91
TNFSF4P23510 Y_RNA.142-201ENST00000363491 102 ntBASIC3.1□□□□□ -1.91
TNFSF4P23510 RNU6-1317P-201ENST00000364582 104 ntBASIC3.1□□□□□ -1.91
TNFSF4P23510 RNU1-140P-201ENST00000365040 165 ntBASIC3.1□□□□□ -1.91
TNFSF4P23510 U8.11-201ENST00000384699 133 ntBASIC3.1□□□□□ -1.91
TNFSF4P23510 U8.12-201ENST00000384701 133 ntBASIC3.1□□□□□ -1.91
TNFSF4P23510 MIR544A-201ENST00000384855 91 ntBASIC3.1□□□□□ -1.91
TNFSF4P23510 MIR548K-201ENST00000408406 116 ntBASIC3.1□□□□□ -1.91
TNFSF4P23510 AP000275.1-201ENST00000411943 390 ntBASIC3.1□□□□□ -1.91
TNFSF4P23510 ATP5A1P2-201ENST00000412323 255 ntBASIC3.1□□□□□ -1.91
TNFSF4P23510 AC074085.1-201ENST00000413598 418 ntBASIC3.1□□□□□ -1.91
TNFSF4P23510 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.1□□□□□ -1.91
TNFSF4P23510 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.1□□□□□ -1.91
TNFSF4P23510 RPS15AP7-201ENST00000439294 405 ntBASIC3.1□□□□□ -1.91
TNFSF4P23510 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.1□□□□□ -1.91
TNFSF4P23510 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.1□□□□□ -1.91
TNFSF4P23510 MRPL50P4-201ENST00000446432 475 ntBASIC3.1□□□□□ -1.91
TNFSF4P23510 AC107399.1-201ENST00000451226 265 ntBASIC3.1□□□□□ -1.91
TNFSF4P23510 CYCSP35-201ENST00000451978 304 ntBASIC3.1□□□□□ -1.91
TNFSF4P23510 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.1□□□□□ -1.91
TNFSF4P23510 PCMTD1P1-201ENST00000455560 355 ntBASIC3.1□□□□□ -1.91
TNFSF4P23510 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.1□□□□□ -1.91
TNFSF4P23510 RNU7-187P-201ENST00000458985 68 ntBASIC3.1□□□□□ -1.91
TNFSF4P23510 U8.18-201ENST00000459285 133 ntBASIC3.1□□□□□ -1.91
TNFSF4P23510 AC091951.2-201ENST00000500762 203 ntBASIC3.1□□□□□ -1.91
TNFSF4P23510 MTND5P5-201ENST00000503764 376 ntBASIC3.1□□□□□ -1.91
TNFSF4P23510 RNU1-95P-201ENST00000516357 160 ntBASIC3.1□□□□□ -1.91
TNFSF4P23510 RNU6-875P-201ENST00000516488 106 ntBASIC3.1□□□□□ -1.91
TNFSF4P23510 RNU1-128P-201ENST00000516704 160 ntBASIC3.1□□□□□ -1.91
TNFSF4P23510 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.1□□□□□ -1.91
TNFSF4P23510 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.1□□□□□ -1.91
TNFSF4P23510 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
TNFSF4P23510 AC008011.1-201ENST00000545989 227 ntBASIC3.1□□□□□ -1.91
TNFSF4P23510 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.1□□□□□ -1.91
TNFSF4P23510 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.1□□□□□ -1.91
TNFSF4P23510 CPDP1-201ENST00000579660 283 ntBASIC3.1□□□□□ -1.91
TNFSF4P23510 AC103810.1-201ENST00000579873 453 ntBASIC3.1□□□□□ -1.91
TNFSF4P23510 MIR3616-201ENST00000584070 92 ntBASIC3.1□□□□□ -1.91
TNFSF4P23510 AC073410.2-201ENST00000603240 332 ntBASIC3.1□□□□□ -1.91
TNFSF4P23510 AP001836.1-201ENST00000604675 523 ntBASIC3.1□□□□□ -1.91
TNFSF4P23510 AC069200.1-201ENST00000609511 323 ntBASIC3.1□□□□□ -1.91
TNFSF4P23510 AL133215.3-201ENST00000609801 448 ntBASIC3.1□□□□□ -1.91
TNFSF4P23510 AC104237.2-201ENST00000612456 443 ntBASIC3.1□□□□□ -1.91
TNFSF4P23510 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
TNFSF4P23510 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TNFSF4P23510 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
TNFSF4P23510 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
TNFSF4P23510 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TNFSF4P23510 AC026241.1-201ENST00000517873 2142 ntBASIC3.1□□□□□ -1.91
TNFSF4P23510 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
TNFSF4P23510 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TNFSF4P23510 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
TNFSF4P23510 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
TNFSF4P23510 RNU6-227P-201ENST00000362865 103 ntBASIC3.09□□□□□ -1.91
TNFSF4P23510 Y_RNA.184-201ENST00000363884 108 ntBASIC3.09□□□□□ -1.91
TNFSF4P23510 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TNFSF4P23510 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
TNFSF4P23510 SNORA5A-201ENST00000384111 134 ntBASIC3.09□□□□□ -1.91
TNFSF4P23510 RNU6-692P-201ENST00000384496 107 ntBASIC3.09□□□□□ -1.91
TNFSF4P23510 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
TNFSF4P23510 AL391417.1-201ENST00000404100 426 ntBASIC3.09□□□□□ -1.91
TNFSF4P23510 AL356432.1-201ENST00000405809 419 ntBASIC3.09□□□□□ -1.91
TNFSF4P23510 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.09□□□□□ -1.91
TNFSF4P23510 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.09□□□□□ -1.91
TNFSF4P23510 NUP35P1-201ENST00000422734 947 ntBASIC3.09□□□□□ -1.91
TNFSF4P23510 BX276092.3-201ENST00000424182 230 ntBASIC3.09□□□□□ -1.91
TNFSF4P23510 AC006989.1-201ENST00000427212 131 ntBASIC3.09□□□□□ -1.91
TNFSF4P23510 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.09□□□□□ -1.91
TNFSF4P23510 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms