Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 MRPS36P4-201ENST00000534436 298 ntBASIC-0.36□□□□□ -2.47
VCANP13611 AC106858.1-201ENST00000637497 429 ntBASIC-0.36□□□□□ -2.47
VCANP13611 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC-0.36□□□□□ -2.47
VCANP13611 RNU6-735P-201ENST00000410612 107 ntBASIC-0.36□□□□□ -2.47
VCANP13611 AC005832.3-201ENST00000537929 631 ntBASIC-0.36□□□□□ -2.47
VCANP13611 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-0.36□□□□□ -2.47
VCANP13611 AL096803.2-201ENST00000450032 677 ntBASIC-0.37□□□□□ -2.47
VCANP13611 RAB11AP2-201ENST00000545905 639 ntBASIC-0.37□□□□□ -2.47
VCANP13611 AC123786.2-201ENST00000603459 275 ntBASIC-0.37□□□□□ -2.47
VCANP13611 AC104465.1-201ENST00000611365 139 ntBASIC-0.37□□□□□ -2.47
VCANP13611 RNU4-65P-201ENST00000410473 140 ntBASIC-0.37□□□□□ -2.47
VCANP13611 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC-0.37□□□□□ -2.47
VCANP13611 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC-0.37□□□□□ -2.47
VCANP13611 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC-0.37□□□□□ -2.47
VCANP13611 AL158163.2-201ENST00000619110 700 ntBASIC-0.37□□□□□ -2.47
VCANP13611 AC004009.2-201ENST00000623016 728 ntBASIC-0.37□□□□□ -2.47
VCANP13611 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.37□□□□□ -2.47
VCANP13611 MIR106A-201ENST00000384870 81 ntBASIC-0.37□□□□□ -2.47
VCANP13611 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.37□□□□□ -2.47
VCANP13611 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC-0.37□□□□□ -2.47
VCANP13611 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC-0.37□□□□□ -2.47
VCANP13611 OR1M4P-201ENST00000589199 287 ntBASIC-0.37□□□□□ -2.47
VCANP13611 AC018462.2-201ENST00000605375 395 ntBASIC-0.37□□□□□ -2.47
VCANP13611 AL049737.1-201ENST00000413920 1403 ntBASIC-0.38□□□□□ -2.47
VCANP13611 RNA5SP264-201ENST00000363115 107 ntBASIC-0.38□□□□□ -2.47
VCANP13611 RNU4-12P-201ENST00000365233 139 ntBASIC-0.38□□□□□ -2.47
VCANP13611 RNA5SP109-201ENST00000391010 116 ntBASIC-0.38□□□□□ -2.47
VCANP13611 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC-0.38□□□□□ -2.47
VCANP13611 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.38□□□□□ -2.47
VCANP13611 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.38□□□□□ -2.47
VCANP13611 RNU6-197P-201ENST00000516680 100 ntBASIC-0.38□□□□□ -2.47
VCANP13611 SMARCE1P4-201ENST00000523647 241 ntBASIC-0.38□□□□□ -2.47
VCANP13611 AC138749.5-201ENST00000611461 208 ntBASIC-0.38□□□□□ -2.47
VCANP13611 AL391994.1-201ENST00000254724 282 ntBASIC-0.38□□□□□ -2.47
VCANP13611 RNU6-338P-201ENST00000383888 105 ntBASIC-0.38□□□□□ -2.47
VCANP13611 RNY3P14-201ENST00000384309 102 ntBASIC-0.38□□□□□ -2.47
VCANP13611 AC138623.1-201ENST00000418060 216 ntBASIC-0.38□□□□□ -2.47
VCANP13611 VPS26AP1-201ENST00000483197 979 ntBASIC-0.38□□□□□ -2.47
VCANP13611 OR5H4P-201ENST00000510851 923 ntBASIC-0.38□□□□□ -2.47
VCANP13611 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC-0.38□□□□□ -2.47
VCANP13611 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.38□□□□□ -2.47
VCANP13611 AC090079.2-201ENST00000575289 768 ntBASIC-0.38□□□□□ -2.47
VCANP13611 SEPT2P1-201ENST00000419651 180 ntBASIC-0.39□□□□□ -2.47
VCANP13611 AC241520.1-201ENST00000422654 1099 ntBASIC-0.39□□□□□ -2.47
VCANP13611 ZNF863P-201ENST00000426746 417 ntBASIC-0.39□□□□□ -2.47
VCANP13611 NANOGP2-201ENST00000435391 727 ntBASIC-0.39□□□□□ -2.47
VCANP13611 TRAPPC13P1-201ENST00000435991 1062 ntBASIC-0.39□□□□□ -2.47
VCANP13611 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC-0.39□□□□□ -2.47
VCANP13611 AC109810.1-201ENST00000534066 224 ntBASIC-0.39□□□□□ -2.47
VCANP13611 AC092106.3-201ENST00000611308 722 ntBASIC-0.39□□□□□ -2.47
VCANP13611 AC096656.1-201ENST00000623826 1364 ntBASIC-0.39□□□□□ -2.47
VCANP13611 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC-0.39□□□□□ -2.47
VCANP13611 RNU6-600P-201ENST00000362524 99 ntBASIC-0.39□□□□□ -2.47
VCANP13611 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.39□□□□□ -2.47
VCANP13611 SNORA1.3-201ENST00000384676 136 ntBASIC-0.39□□□□□ -2.47
VCANP13611 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC-0.39□□□□□ -2.47
VCANP13611 AC021739.1-201ENST00000559631 174 ntBASIC-0.39□□□□□ -2.47
VCANP13611 AC004584.2-201ENST00000570407 410 ntBASIC-0.39□□□□□ -2.47
VCANP13611 AC034236.3-201ENST00000605999 461 ntBASIC-0.39□□□□□ -2.47
VCANP13611 SNORD14C-201ENST00000365382 88 ntBASIC-0.39□□□□□ -2.47
VCANP13611 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC-0.39□□□□□ -2.47
VCANP13611 SCARNA17-201ENST00000516183 144 ntBASIC-0.39□□□□□ -2.47
VCANP13611 AL121839.1-201ENST00000556233 1185 ntBASIC-0.39□□□□□ -2.47
VCANP13611 LLPHP1-201ENST00000603571 367 ntBASIC-0.39□□□□□ -2.47
VCANP13611 RNU6-1237P-201ENST00000384777 107 ntBASIC-0.4□□□□□ -2.47
VCANP13611 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.4□□□□□ -2.47
VCANP13611 AL606495.1-201ENST00000422100 813 ntBASIC-0.4□□□□□ -2.47
VCANP13611 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC-0.4□□□□□ -2.47
VCANP13611 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC-0.4□□□□□ -2.47
VCANP13611 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC-0.4□□□□□ -2.47
VCANP13611 OR52A4P-202ENST00000481634 799 ntBASIC-0.4□□□□□ -2.47
VCANP13611 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC-0.4□□□□□ -2.47
VCANP13611 AP002453.2-201ENST00000533503 320 ntBASIC-0.4□□□□□ -2.47
VCANP13611 AL590410.1-201ENST00000617925 333 ntBASIC-0.4□□□□□ -2.47
VCANP13611 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC-0.4□□□□□ -2.47
VCANP13611 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC-0.4□□□□□ -2.47
VCANP13611 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC-0.4□□□□□ -2.47
VCANP13611 RNU6-287P-201ENST00000516230 98 ntBASIC-0.4□□□□□ -2.47
VCANP13611 OR8K2P-201ENST00000524645 927 ntBASIC-0.4□□□□□ -2.47
VCANP13611 AL022345.2-201ENST00000606307 135 ntBASIC-0.4□□□□□ -2.47
VCANP13611 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC-0.4□□□□□ -2.47
VCANP13611 AC008088.1-201ENST00000580993 280 ntBASIC-0.4□□□□□ -2.47
VCANP13611 AL031667.3-201ENST00000620124 655 ntBASIC-0.4□□□□□ -2.47
VCANP13611 AL034374.1-201ENST00000406329 351 ntBASIC-0.41□□□□□ -2.47
VCANP13611 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC-0.41□□□□□ -2.47
VCANP13611 RPL17P35-201ENST00000432217 549 ntBASIC-0.41□□□□□ -2.47
VCANP13611 AC092757.1-201ENST00000467293 467 ntBASIC-0.41□□□□□ -2.47
VCANP13611 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC-0.41□□□□□ -2.47
VCANP13611 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC-0.41□□□□□ -2.47
VCANP13611 AC073544.2-201ENST00000601155 540 ntBASIC-0.41□□□□□ -2.47
VCANP13611 AC093648.1-201ENST00000623546 606 ntBASIC-0.41□□□□□ -2.47
VCANP13611 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC-0.41□□□□□ -2.47
VCANP13611 RNU6-370P-201ENST00000411008 104 ntBASIC-0.41□□□□□ -2.48
VCANP13611 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.41□□□□□ -2.48
VCANP13611 BNIP3P25-201ENST00000596023 559 ntBASIC-0.41□□□□□ -2.48
VCANP13611 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC-0.42□□□□□ -2.48
VCANP13611 MIR424-201ENST00000362227 98 ntBASIC-0.42□□□□□ -2.48
VCANP13611 MIRLET7D-201ENST00000362263 87 ntBASIC-0.42□□□□□ -2.48
VCANP13611 SNORD114-5-201ENST00000362928 70 ntBASIC-0.42□□□□□ -2.48
VCANP13611 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms