Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
MS4A1P11836 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
MS4A1P11836 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
MS4A1P11836 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
MS4A1P11836 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
MS4A1P11836 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
MS4A1P11836 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
MS4A1P11836 RNA5SP388-201ENST00000362584 119 ntBASIC5.55□□□□□ -1.52
MS4A1P11836 RNA5SP175-201ENST00000364275 119 ntBASIC5.55□□□□□ -1.52
MS4A1P11836 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
MS4A1P11836 Y_RNA.435-201ENST00000384095 112 ntBASIC5.55□□□□□ -1.52
MS4A1P11836 MIR129-1-201ENST00000384972 72 ntBASIC5.55□□□□□ -1.52
MS4A1P11836 PPIAP31-201ENST00000405422 495 ntBASIC5.55□□□□□ -1.52
MS4A1P11836 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.55□□□□□ -1.52
MS4A1P11836 RPL37P4-201ENST00000448908 268 ntBASIC5.55□□□□□ -1.52
MS4A1P11836 TEX41-209ENST00000451478 452 ntTSL 2 BASIC5.55□□□□□ -1.52
MS4A1P11836 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC5.55□□□□□ -1.52
MS4A1P11836 AP000870.1-201ENST00000472927 406 ntBASIC5.55□□□□□ -1.52
MS4A1P11836 AC074133.1-201ENST00000515696 183 ntBASIC5.55□□□□□ -1.52
MS4A1P11836 RN7SKP49-201ENST00000516675 260 ntBASIC5.55□□□□□ -1.52
MS4A1P11836 RNU6-1282P-201ENST00000516735 96 ntBASIC5.55□□□□□ -1.52
MS4A1P11836 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC5.55□□□□□ -1.52
MS4A1P11836 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.55□□□□□ -1.52
MS4A1P11836 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
MS4A1P11836 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC5.55□□□□□ -1.52
MS4A1P11836 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
MS4A1P11836 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.55□□□□□ -1.52
MS4A1P11836 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.55□□□□□ -1.52
MS4A1P11836 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC5.55□□□□□ -1.52
MS4A1P11836 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
MS4A1P11836 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC5.55□□□□□ -1.52
MS4A1P11836 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
MS4A1P11836 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
MS4A1P11836 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
MS4A1P11836 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.54□□□□□ -1.52
MS4A1P11836 Y_RNA.418-201ENST00000384029 102 ntBASIC5.54□□□□□ -1.52
MS4A1P11836 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
MS4A1P11836 SNORD12B-201ENST00000410433 91 ntBASIC5.54□□□□□ -1.52
MS4A1P11836 RPL26P27-201ENST00000414397 437 ntBASIC5.54□□□□□ -1.52
MS4A1P11836 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.54□□□□□ -1.52
MS4A1P11836 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC5.54□□□□□ -1.52
MS4A1P11836 AC011998.1-201ENST00000433403 117 ntBASIC5.54□□□□□ -1.52
MS4A1P11836 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
MS4A1P11836 RPL30P5-201ENST00000494923 336 ntBASIC5.54□□□□□ -1.52
MS4A1P11836 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.54□□□□□ -1.52
MS4A1P11836 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC5.54□□□□□ -1.52
MS4A1P11836 AL138963.2-201ENST00000605137 226 ntBASIC5.54□□□□□ -1.52
MS4A1P11836 AC100827.5-201ENST00000615883 426 ntBASIC5.54□□□□□ -1.52
MS4A1P11836 AC112200.1-201ENST00000625015 234 ntBASIC5.54□□□□□ -1.52
MS4A1P11836 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.53□□□□□ -1.52
MS4A1P11836 RBBP8P1-201ENST00000449447 1844 ntBASIC5.53□□□□□ -1.52
MS4A1P11836 Y_RNA.441-201ENST00000384123 112 ntBASIC5.53□□□□□ -1.52
MS4A1P11836 RNU6-318P-201ENST00000384283 103 ntBASIC5.53□□□□□ -1.52
MS4A1P11836 RNU6-658P-201ENST00000384606 106 ntBASIC5.53□□□□□ -1.52
MS4A1P11836 SNORA22C-201ENST00000384614 134 ntBASIC5.53□□□□□ -1.52
MS4A1P11836 SNORD66.1-201ENST00000391230 76 ntBASIC5.53□□□□□ -1.52
MS4A1P11836 MTHFD2P2-201ENST00000407725 247 ntBASIC5.53□□□□□ -1.52
MS4A1P11836 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.53□□□□□ -1.52
MS4A1P11836 RPL23AP1-201ENST00000428990 471 ntBASIC5.53□□□□□ -1.52
MS4A1P11836 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC5.53□□□□□ -1.52
MS4A1P11836 AC096638.1-201ENST00000444678 216 ntBASIC5.53□□□□□ -1.52
MS4A1P11836 RPL35AP15-201ENST00000468042 339 ntBASIC5.53□□□□□ -1.52
MS4A1P11836 RPL21P126-201ENST00000470049 478 ntBASIC5.53□□□□□ -1.52
MS4A1P11836 RNY3P16-201ENST00000516338 101 ntBASIC5.53□□□□□ -1.52
MS4A1P11836 RNU7-110P-201ENST00000516891 62 ntBASIC5.53□□□□□ -1.52
MS4A1P11836 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC5.53□□□□□ -1.52
MS4A1P11836 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC5.53□□□□□ -1.52
MS4A1P11836 MTND1P7-201ENST00000632801 297 ntBASIC5.53□□□□□ -1.52
MS4A1P11836 BMS1P21-201ENST00000634565 365 ntBASIC5.53□□□□□ -1.52
MS4A1P11836 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
MS4A1P11836 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
MS4A1P11836 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.52□□□□□ -1.53
MS4A1P11836 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
MS4A1P11836 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
MS4A1P11836 RNU6-1197P-201ENST00000391183 107 ntBASIC5.52□□□□□ -1.53
MS4A1P11836 HMGN2P30-201ENST00000423237 256 ntBASIC5.52□□□□□ -1.53
MS4A1P11836 AC243964.1-201ENST00000441814 261 ntBASIC5.52□□□□□ -1.53
MS4A1P11836 RN7SL585P-201ENST00000470538 280 ntBASIC5.52□□□□□ -1.53
MS4A1P11836 AP001025.1-201ENST00000486139 332 ntBASIC5.52□□□□□ -1.53
MS4A1P11836 AC091959.1-201ENST00000495857 238 ntBASIC5.52□□□□□ -1.53
MS4A1P11836 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.52□□□□□ -1.53
MS4A1P11836 RNU4ATAC6P-201ENST00000516592 126 ntBASIC5.52□□□□□ -1.53
MS4A1P11836 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.52□□□□□ -1.53
MS4A1P11836 FTX_3.1-201ENST00000610451 147 ntBASIC5.52□□□□□ -1.53
MS4A1P11836 Mico1.1-201ENST00000611698 204 ntBASIC5.52□□□□□ -1.53
MS4A1P11836 AC005296.1-201ENST00000616145 209 ntBASIC5.52□□□□□ -1.53
MS4A1P11836 SRP72P2-201ENST00000344851 1979 ntBASIC5.52□□□□□ -1.53
MS4A1P11836 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
MS4A1P11836 AC018529.3-201ENST00000624212 2254 ntBASIC5.51□□□□□ -1.53
MS4A1P11836 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC5.51□□□□□ -1.53
MS4A1P11836 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
MS4A1P11836 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
MS4A1P11836 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
MS4A1P11836 UBE2WP1-201ENST00000362030 340 ntBASIC5.51□□□□□ -1.53
MS4A1P11836 Y_RNA.308-201ENST00000365043 101 ntBASIC5.51□□□□□ -1.53
MS4A1P11836 Y_RNA.343-201ENST00000365354 112 ntBASIC5.51□□□□□ -1.53
MS4A1P11836 RNU6-1289P-201ENST00000384431 106 ntBASIC5.51□□□□□ -1.53
MS4A1P11836 Y_RNA.497-201ENST00000384447 98 ntBASIC5.51□□□□□ -1.53
MS4A1P11836 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
MS4A1P11836 RNA5SP306-201ENST00000411087 107 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 153.9 ms