Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 MIR5583-1-201ENST00000580941 59 ntBASIC2.6□□□□□ -1.99
RAB40ALP0C0E4 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.6□□□□□ -1.99
RAB40ALP0C0E4 AC092954.2-201ENST00000609103 430 ntBASIC2.6□□□□□ -1.99
RAB40ALP0C0E4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.6□□□□□ -1.99
RAB40ALP0C0E4 uc_338.14-201ENST00000613162 166 ntBASIC2.6□□□□□ -1.99
RAB40ALP0C0E4 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.6□□□□□ -1.99
RAB40ALP0C0E4 uc_338.34-201ENST00000617467 174 ntBASIC2.6□□□□□ -1.99
RAB40ALP0C0E4 AC010378.1-201ENST00000619270 362 ntBASIC2.6□□□□□ -1.99
RAB40ALP0C0E4 AC022418.1-201ENST00000624118 445 ntBASIC2.6□□□□□ -1.99
RAB40ALP0C0E4 MIR6733-201ENST00000635723 61 ntBASIC2.6□□□□□ -1.99
RAB40ALP0C0E4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.6□□□□□ -1.99
RAB40ALP0C0E4 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.6□□□□□ -1.99
RAB40ALP0C0E4 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 RPL9P7-201ENST00000330965 580 ntBASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 MIR26A1-201ENST00000362205 77 ntBASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 RNU1-112P-201ENST00000364401 164 ntBASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 RNU6-1303P-201ENST00000364841 107 ntBASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 RNU6-1180P-201ENST00000364935 107 ntBASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 Y_RNA.372-201ENST00000365599 102 ntBASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 MIR627-201ENST00000384979 97 ntBASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 SNORA16.2-201ENST00000390991 127 ntBASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 RNU6-780P-201ENST00000391030 104 ntBASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 AL445529.1-201ENST00000398713 389 ntBASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 CIR1P3-201ENST00000405137 479 ntBASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 AL513475.1-201ENST00000406602 315 ntBASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 RAP1BP3-201ENST00000407180 549 ntBASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 RNU2-3P-201ENST00000410144 191 ntBASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 RNU2-52P-201ENST00000410680 190 ntBASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 CYCSP33-201ENST00000414485 327 ntBASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 RPL39P40-201ENST00000445481 146 ntBASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 RNU7-180P-201ENST00000459240 63 ntBASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 AP001324.2-201ENST00000461163 319 ntBASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 AL121769.1-201ENST00000469473 401 ntBASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 RPL9P33-201ENST00000484311 566 ntBASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 BTF3P12-201ENST00000519620 469 ntBASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 MTND4P7-201ENST00000523876 130 ntBASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 HMGB1P33-201ENST00000563485 527 ntBASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 AL670379.10-201ENST00000604330 253 ntBASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 AL670379.9-201ENST00000605428 253 ntBASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 AC026585.1-201ENST00000619582 524 ntBASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.59□□□□□ -1.99
RAB40ALP0C0E4 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
RAB40ALP0C0E4 AC092593.1-201ENST00000515413 1815 ntBASIC2.58□□□□□ -2
RAB40ALP0C0E4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.58□□□□□ -2
RAB40ALP0C0E4 U8.9-201ENST00000365667 134 ntBASIC2.58□□□□□ -2
RAB40ALP0C0E4 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.58□□□□□ -2
RAB40ALP0C0E4 RNU6-301P-201ENST00000384277 107 ntBASIC2.58□□□□□ -2
RAB40ALP0C0E4 RNU6-1215P-201ENST00000384441 102 ntBASIC2.58□□□□□ -2
RAB40ALP0C0E4 FO393413.1-201ENST00000402892 195 ntBASIC2.58□□□□□ -2
RAB40ALP0C0E4 AL590002.1-201ENST00000406554 418 ntBASIC2.58□□□□□ -2
RAB40ALP0C0E4 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.58□□□□□ -2
RAB40ALP0C0E4 ARL5AP4-201ENST00000430731 512 ntBASIC2.58□□□□□ -2
RAB40ALP0C0E4 AC004383.1-201ENST00000438135 289 ntBASIC2.58□□□□□ -2
RAB40ALP0C0E4 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.58□□□□□ -2
RAB40ALP0C0E4 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.58□□□□□ -2
RAB40ALP0C0E4 CALM1P1-201ENST00000442082 433 ntBASIC2.58□□□□□ -2
RAB40ALP0C0E4 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.58□□□□□ -2
RAB40ALP0C0E4 AC012308.1-201ENST00000451232 178 ntBASIC2.58□□□□□ -2
RAB40ALP0C0E4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.58□□□□□ -2
RAB40ALP0C0E4 AC096725.1-201ENST00000514266 313 ntBASIC2.58□□□□□ -2
RAB40ALP0C0E4 RNA5SP401-201ENST00000515920 127 ntBASIC2.58□□□□□ -2
RAB40ALP0C0E4 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.58□□□□□ -2
RAB40ALP0C0E4 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.58□□□□□ -2
RAB40ALP0C0E4 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.58□□□□□ -2
RAB40ALP0C0E4 HSPE1P20-201ENST00000538133 289 ntBASIC2.58□□□□□ -2
RAB40ALP0C0E4 ZNF861P-201ENST00000588126 639 ntBASIC2.58□□□□□ -2
RAB40ALP0C0E4 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.58□□□□□ -2
RAB40ALP0C0E4 AF250324.2-201ENST00000608299 610 ntBASIC2.58□□□□□ -2
RAB40ALP0C0E4 U2.17-201ENST00000611454 95 ntBASIC2.58□□□□□ -2
RAB40ALP0C0E4 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.58□□□□□ -2
RAB40ALP0C0E4 AC092608.2-201ENST00000624427 218 ntBASIC2.58□□□□□ -2
RAB40ALP0C0E4 AP003400.5-201ENST00000624827 617 ntBASIC2.58□□□□□ -2
RAB40ALP0C0E4 MTND5P30-201ENST00000452896 1731 ntBASIC2.58□□□□□ -2
RAB40ALP0C0E4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.58□□□□□ -2
RAB40ALP0C0E4 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.58□□□□□ -2
RAB40ALP0C0E4 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.58□□□□□ -2
RAB40ALP0C0E4 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.57□□□□□ -2
RAB40ALP0C0E4 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.57□□□□□ -2
RAB40ALP0C0E4 RNU6-461P-201ENST00000364195 107 ntBASIC2.57□□□□□ -2
RAB40ALP0C0E4 SNORD56.5-201ENST00000364281 72 ntBASIC2.57□□□□□ -2
RAB40ALP0C0E4 Y_RNA.324-201ENST00000365165 102 ntBASIC2.57□□□□□ -2
RAB40ALP0C0E4 SET-203ENST00000372688 801 ntTSL 2 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 600.8 ms