Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.21□□□□□ -2.22
HLA-DQB2P05538 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.21□□□□□ -2.22
HLA-DQB2P05538 Z82205.1-201ENST00000428456 297 ntBASIC1.21□□□□□ -2.22
HLA-DQB2P05538 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.21□□□□□ -2.22
HLA-DQB2P05538 MED28P2-201ENST00000475771 317 ntBASIC1.21□□□□□ -2.22
HLA-DQB2P05538 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1.21□□□□□ -2.22
HLA-DQB2P05538 RNU2-53P-201ENST00000516257 147 ntBASIC1.21□□□□□ -2.22
HLA-DQB2P05538 AC109329.1-201ENST00000518744 317 ntBASIC1.21□□□□□ -2.22
HLA-DQB2P05538 AP003392.2-201ENST00000527269 208 ntBASIC1.21□□□□□ -2.22
HLA-DQB2P05538 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.21□□□□□ -2.22
HLA-DQB2P05538 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.21□□□□□ -2.22
HLA-DQB2P05538 AP001981.2-201ENST00000603241 418 ntBASIC1.21□□□□□ -2.22
HLA-DQB2P05538 AL596327.1-201ENST00000603629 213 ntBASIC1.21□□□□□ -2.22
HLA-DQB2P05538 AC093788.1-201ENST00000609356 927 ntBASIC1.21□□□□□ -2.22
HLA-DQB2P05538 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.21□□□□□ -2.22
HLA-DQB2P05538 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.21□□□□□ -2.22
HLA-DQB2P05538 AL121895.2-201ENST00000619558 447 ntBASIC1.21□□□□□ -2.22
HLA-DQB2P05538 AC091965.5-201ENST00000624785 342 ntBASIC1.21□□□□□ -2.22
HLA-DQB2P05538 AL512643.1-201ENST00000635735 524 ntBASIC1.21□□□□□ -2.22
HLA-DQB2P05538 AC099654.8-201ENST00000637757 681 ntBASIC1.21□□□□□ -2.22
HLA-DQB2P05538 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.21□□□□□ -2.22
HLA-DQB2P05538 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.21□□□□□ -2.22
HLA-DQB2P05538 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.21□□□□□ -2.22
HLA-DQB2P05538 AL161722.3-201ENST00000605789 2983 ntBASIC1.2□□□□□ -2.22
HLA-DQB2P05538 RBBP8P1-201ENST00000449447 1844 ntBASIC1.2□□□□□ -2.22
HLA-DQB2P05538 Y_RNA.472-201ENST00000384322 102 ntBASIC1.2□□□□□ -2.22
HLA-DQB2P05538 SNORD14D-201ENST00000384390 87 ntBASIC1.2□□□□□ -2.22
HLA-DQB2P05538 RNU11-3P-201ENST00000391111 133 ntBASIC1.2□□□□□ -2.22
HLA-DQB2P05538 RNU2-72P-201ENST00000411175 163 ntBASIC1.2□□□□□ -2.22
HLA-DQB2P05538 AC138623.1-201ENST00000418060 216 ntBASIC1.2□□□□□ -2.22
HLA-DQB2P05538 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.2□□□□□ -2.22
HLA-DQB2P05538 SDAD1P3-201ENST00000427380 333 ntBASIC1.2□□□□□ -2.22
HLA-DQB2P05538 RPS6P15-201ENST00000431996 751 ntBASIC1.2□□□□□ -2.22
HLA-DQB2P05538 AL591704.1-201ENST00000432574 275 ntBASIC1.2□□□□□ -2.22
HLA-DQB2P05538 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.2□□□□□ -2.22
HLA-DQB2P05538 AC108729.1-201ENST00000487812 947 ntBASIC1.2□□□□□ -2.22
HLA-DQB2P05538 SUMO2P5-201ENST00000506790 245 ntBASIC1.2□□□□□ -2.22
HLA-DQB2P05538 TPT1P8-201ENST00000510120 555 ntBASIC1.2□□□□□ -2.22
HLA-DQB2P05538 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.2□□□□□ -2.22
HLA-DQB2P05538 AC109445.1-201ENST00000512356 383 ntBASIC1.2□□□□□ -2.22
HLA-DQB2P05538 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.2□□□□□ -2.22
HLA-DQB2P05538 MTND1P36-201ENST00000522384 936 ntBASIC1.2□□□□□ -2.22
HLA-DQB2P05538 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.2□□□□□ -2.22
HLA-DQB2P05538 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.2□□□□□ -2.22
HLA-DQB2P05538 MIR3124-201ENST00000582636 67 ntBASIC1.2□□□□□ -2.22
HLA-DQB2P05538 AC068620.3-201ENST00000602749 560 ntBASIC1.2□□□□□ -2.22
HLA-DQB2P05538 AC012360.2-201ENST00000609349 391 ntBASIC1.2□□□□□ -2.22
HLA-DQB2P05538 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.2□□□□□ -2.22
HLA-DQB2P05538 U1.36-201ENST00000620684 176 ntBASIC1.2□□□□□ -2.22
HLA-DQB2P05538 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.2□□□□□ -2.22
HLA-DQB2P05538 MTND5P42-201ENST00000637720 498 ntBASIC1.2□□□□□ -2.22
HLA-DQB2P05538 AL391987.6-201ENST00000305671 199 ntBASIC1.19□□□□□ -2.22
HLA-DQB2P05538 MIR424-201ENST00000362227 98 ntBASIC1.19□□□□□ -2.22
HLA-DQB2P05538 RNU6-858P-201ENST00000362436 107 ntBASIC1.19□□□□□ -2.22
HLA-DQB2P05538 RNU6-462P-201ENST00000362659 105 ntBASIC1.19□□□□□ -2.22
HLA-DQB2P05538 MIR301A-201ENST00000385261 86 ntBASIC1.19□□□□□ -2.22
HLA-DQB2P05538 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
HLA-DQB2P05538 RNU6-298P-201ENST00000390888 96 ntBASIC1.19□□□□□ -2.22
HLA-DQB2P05538 FGF7P8-201ENST00000402994 292 ntBASIC1.19□□□□□ -2.22
HLA-DQB2P05538 RNU2-32P-201ENST00000411193 191 ntBASIC1.19□□□□□ -2.22
HLA-DQB2P05538 AL603825.1-201ENST00000438481 80 ntBASIC1.19□□□□□ -2.22
HLA-DQB2P05538 AC245102.2-201ENST00000448956 180 ntBASIC1.19□□□□□ -2.22
HLA-DQB2P05538 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.19□□□□□ -2.22
HLA-DQB2P05538 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.19□□□□□ -2.22
HLA-DQB2P05538 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.19□□□□□ -2.22
HLA-DQB2P05538 PTP4A1P4-201ENST00000512479 322 ntBASIC1.19□□□□□ -2.22
HLA-DQB2P05538 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.19□□□□□ -2.22
HLA-DQB2P05538 RNU6-1315P-201ENST00000517187 99 ntBASIC1.19□□□□□ -2.22
HLA-DQB2P05538 COPS8P3-201ENST00000526024 482 ntBASIC1.19□□□□□ -2.22
HLA-DQB2P05538 AC135279.1-201ENST00000543493 504 ntBASIC1.19□□□□□ -2.22
HLA-DQB2P05538 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.19□□□□□ -2.22
HLA-DQB2P05538 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.19□□□□□ -2.22
HLA-DQB2P05538 AC008269.2-201ENST00000561915 1105 ntBASIC1.19□□□□□ -2.22
HLA-DQB2P05538 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.19□□□□□ -2.22
HLA-DQB2P05538 AC010900.2-201ENST00000604508 210 ntBASIC1.19□□□□□ -2.22
HLA-DQB2P05538 snoU13.31-201ENST00000607291 104 ntBASIC1.19□□□□□ -2.22
HLA-DQB2P05538 AC004908.3-201ENST00000610248 625 ntBASIC1.19□□□□□ -2.22
HLA-DQB2P05538 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.19□□□□□ -2.22
HLA-DQB2P05538 AC091304.6-201ENST00000619761 202 ntBASIC1.19□□□□□ -2.22
HLA-DQB2P05538 AC090517.3-201ENST00000625170 141 ntBASIC1.19□□□□□ -2.22
HLA-DQB2P05538 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.19□□□□□ -2.22
HLA-DQB2P05538 AC092125.1-201ENST00000562568 1995 ntBASIC1.19□□□□□ -2.22
HLA-DQB2P05538 FARSBP1-201ENST00000435808 1778 ntBASIC1.19□□□□□ -2.22
HLA-DQB2P05538 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.18□□□□□ -2.22
HLA-DQB2P05538 RNU1-58P-201ENST00000362413 163 ntBASIC1.18□□□□□ -2.22
HLA-DQB2P05538 RNU4-91P-201ENST00000364778 135 ntBASIC1.18□□□□□ -2.22
HLA-DQB2P05538 RNU6-278P-201ENST00000390945 109 ntBASIC1.18□□□□□ -2.22
HLA-DQB2P05538 FCF1P10-201ENST00000407590 479 ntBASIC1.18□□□□□ -2.22
HLA-DQB2P05538 Y_RNA.595-201ENST00000410403 105 ntBASIC1.18□□□□□ -2.22
HLA-DQB2P05538 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
HLA-DQB2P05538 AC016831.2-201ENST00000417179 352 ntBASIC1.18□□□□□ -2.22
HLA-DQB2P05538 RAC1P6-201ENST00000423911 575 ntBASIC1.18□□□□□ -2.22
HLA-DQB2P05538 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.18□□□□□ -2.22
HLA-DQB2P05538 AL117351.1-201ENST00000438864 766 ntBASIC1.18□□□□□ -2.22
HLA-DQB2P05538 AC118469.1-201ENST00000442943 488 ntBASIC1.18□□□□□ -2.22
HLA-DQB2P05538 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.18□□□□□ -2.22
HLA-DQB2P05538 AC003071.1-201ENST00000451219 789 ntBASIC1.18□□□□□ -2.22
HLA-DQB2P05538 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.18□□□□□ -2.22
HLA-DQB2P05538 AC108059.3-201ENST00000456388 214 ntBASIC1.18□□□□□ -2.22
HLA-DQB2P05538 MTND1P3-201ENST00000484956 952 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms