Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RNU6-648P-201ENST00000410190 107 ntBASIC2.37□□□□□ -2.03
MT-ND1P03886 RNU6-1068P-201ENST00000410958 103 ntBASIC2.37□□□□□ -2.03
MT-ND1P03886 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.37□□□□□ -2.03
MT-ND1P03886 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.37□□□□□ -2.03
MT-ND1P03886 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.37□□□□□ -2.03
MT-ND1P03886 MTCO1P20-201ENST00000425366 358 ntBASIC2.37□□□□□ -2.03
MT-ND1P03886 USP9YP18-201ENST00000425912 695 ntBASIC2.37□□□□□ -2.03
MT-ND1P03886 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.37□□□□□ -2.03
MT-ND1P03886 RPS12P2-201ENST00000439728 269 ntBASIC2.37□□□□□ -2.03
MT-ND1P03886 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.37□□□□□ -2.03
MT-ND1P03886 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.37□□□□□ -2.03
MT-ND1P03886 AL360271.2-201ENST00000447710 161 ntBASIC2.37□□□□□ -2.03
MT-ND1P03886 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.37□□□□□ -2.03
MT-ND1P03886 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.37□□□□□ -2.03
MT-ND1P03886 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.37□□□□□ -2.03
MT-ND1P03886 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.37□□□□□ -2.03
MT-ND1P03886 AL512310.1-201ENST00000548639 172 ntBASIC2.37□□□□□ -2.03
MT-ND1P03886 AC006199.1-201ENST00000548728 219 ntBASIC2.37□□□□□ -2.03
MT-ND1P03886 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.37□□□□□ -2.03
MT-ND1P03886 AL157871.3-201ENST00000557231 293 ntBASIC2.37□□□□□ -2.03
MT-ND1P03886 AC027807.1-201ENST00000559921 996 ntBASIC2.37□□□□□ -2.03
MT-ND1P03886 AC009163.5-201ENST00000575421 637 ntBASIC2.37□□□□□ -2.03
MT-ND1P03886 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
MT-ND1P03886 AC008945.2-201ENST00000606056 604 ntBASIC2.37□□□□□ -2.03
MT-ND1P03886 AC092794.1-201ENST00000612734 582 ntBASIC2.37□□□□□ -2.03
MT-ND1P03886 HMGB1P24-202ENST00000615653 685 ntBASIC2.37□□□□□ -2.03
MT-ND1P03886 MIR1321-201ENST00000637766 79 ntBASIC2.37□□□□□ -2.03
MT-ND1P03886 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.37□□□□□ -2.03
MT-ND1P03886 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.37□□□□□ -2.03
MT-ND1P03886 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.36□□□□□ -2.03
MT-ND1P03886 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.36□□□□□ -2.03
MT-ND1P03886 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.36□□□□□ -2.03
MT-ND1P03886 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
MT-ND1P03886 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
MT-ND1P03886 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
MT-ND1P03886 MIR208A-201ENST00000362287 71 ntBASIC2.36□□□□□ -2.03
MT-ND1P03886 RNY4P14-201ENST00000363656 96 ntBASIC2.36□□□□□ -2.03
MT-ND1P03886 SNORA38-201ENST00000363946 132 ntBASIC2.36□□□□□ -2.03
MT-ND1P03886 Y_RNA.256-201ENST00000364594 104 ntBASIC2.36□□□□□ -2.03
MT-ND1P03886 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.36□□□□□ -2.03
MT-ND1P03886 Z98749.2-208ENST00000381646 500 ntBASIC2.36□□□□□ -2.03
MT-ND1P03886 MIR301A-201ENST00000385261 86 ntBASIC2.36□□□□□ -2.03
MT-ND1P03886 RNU2-29P-201ENST00000410423 189 ntBASIC2.36□□□□□ -2.03
MT-ND1P03886 RNU6-1025P-201ENST00000410629 104 ntBASIC2.36□□□□□ -2.03
MT-ND1P03886 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.36□□□□□ -2.03
MT-ND1P03886 RPLP0P7-201ENST00000416050 667 ntBASIC2.36□□□□□ -2.03
MT-ND1P03886 AL669831.1-202ENST00000428504 417 ntBASIC2.36□□□□□ -2.03
MT-ND1P03886 GTF2IP13-201ENST00000438487 386 ntBASIC2.36□□□□□ -2.03
MT-ND1P03886 AL161651.1-201ENST00000440882 223 ntBASIC2.36□□□□□ -2.03
MT-ND1P03886 EEF1B2P7-201ENST00000451177 676 ntBASIC2.36□□□□□ -2.03
MT-ND1P03886 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.36□□□□□ -2.03
MT-ND1P03886 RNU7-180P-201ENST00000459240 63 ntBASIC2.36□□□□□ -2.03
MT-ND1P03886 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.36□□□□□ -2.03
MT-ND1P03886 RNU6-1281P-201ENST00000516223 105 ntBASIC2.36□□□□□ -2.03
MT-ND1P03886 SNORA31.6-201ENST00000516241 130 ntBASIC2.36□□□□□ -2.03
MT-ND1P03886 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.36□□□□□ -2.03
MT-ND1P03886 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.36□□□□□ -2.03
MT-ND1P03886 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.36□□□□□ -2.03
MT-ND1P03886 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.36□□□□□ -2.03
MT-ND1P03886 AL157687.1-201ENST00000554853 619 ntBASIC2.36□□□□□ -2.03
MT-ND1P03886 AL138976.2-201ENST00000563989 694 ntBASIC2.36□□□□□ -2.03
MT-ND1P03886 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.36□□□□□ -2.03
MT-ND1P03886 MIR3199-1-201ENST00000582434 88 ntBASIC2.36□□□□□ -2.03
MT-ND1P03886 MIR5194-201ENST00000582634 120 ntBASIC2.36□□□□□ -2.03
MT-ND1P03886 MIR4658-201ENST00000584344 65 ntBASIC2.36□□□□□ -2.03
MT-ND1P03886 MIR4424-201ENST00000585257 86 ntBASIC2.36□□□□□ -2.03
MT-ND1P03886 AL451007.1-201ENST00000595491 289 ntBASIC2.36□□□□□ -2.03
MT-ND1P03886 AC005261.5-201ENST00000596280 355 ntBASIC2.36□□□□□ -2.03
MT-ND1P03886 AC073539.2-201ENST00000597113 165 ntBASIC2.36□□□□□ -2.03
MT-ND1P03886 AL645944.1-201ENST00000603857 493 ntBASIC2.36□□□□□ -2.03
MT-ND1P03886 AL161756.2-201ENST00000604597 246 ntBASIC2.36□□□□□ -2.03
MT-ND1P03886 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.36□□□□□ -2.03
MT-ND1P03886 MIR3688-2-201ENST00000636963 87 ntBASIC2.36□□□□□ -2.03
MT-ND1P03886 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
MT-ND1P03886 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.36□□□□□ -2.03
MT-ND1P03886 MTND4P35-201ENST00000604257 1375 ntBASIC2.36□□□□□ -2.03
MT-ND1P03886 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
MT-ND1P03886 Y_RNA.9-201ENST00000362354 101 ntBASIC2.35□□□□□ -2.03
MT-ND1P03886 RNU4-20P-201ENST00000365601 151 ntBASIC2.35□□□□□ -2.03
MT-ND1P03886 Y_RNA.402-201ENST00000383972 102 ntBASIC2.35□□□□□ -2.03
MT-ND1P03886 RNU6-1127P-201ENST00000384580 107 ntBASIC2.35□□□□□ -2.03
MT-ND1P03886 RNU6-220P-201ENST00000390919 107 ntBASIC2.35□□□□□ -2.03
MT-ND1P03886 AL360182.1-201ENST00000397433 468 ntBASIC2.35□□□□□ -2.03
MT-ND1P03886 CIR1P3-201ENST00000405137 479 ntBASIC2.35□□□□□ -2.03
MT-ND1P03886 USP9YP6-201ENST00000413550 854 ntBASIC2.35□□□□□ -2.03
MT-ND1P03886 RPL21P90-201ENST00000415692 466 ntBASIC2.35□□□□□ -2.03
MT-ND1P03886 USP9YP27-201ENST00000418455 438 ntBASIC2.35□□□□□ -2.03
MT-ND1P03886 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.35□□□□□ -2.03
MT-ND1P03886 EIF1P1-201ENST00000421436 341 ntBASIC2.35□□□□□ -2.03
MT-ND1P03886 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.35□□□□□ -2.03
MT-ND1P03886 AC105272.1-201ENST00000438604 198 ntBASIC2.35□□□□□ -2.03
MT-ND1P03886 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.35□□□□□ -2.03
MT-ND1P03886 AC092989.1-201ENST00000481235 277 ntBASIC2.35□□□□□ -2.03
MT-ND1P03886 CCDC34P1-201ENST00000507441 517 ntBASIC2.35□□□□□ -2.03
MT-ND1P03886 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.35□□□□□ -2.03
MT-ND1P03886 AC112206.3-201ENST00000514578 389 ntBASIC2.35□□□□□ -2.03
MT-ND1P03886 SCARNA3-201ENST00000517097 143 ntBASIC2.35□□□□□ -2.03
MT-ND1P03886 SNORA70.24-201ENST00000517233 118 ntBASIC2.35□□□□□ -2.03
MT-ND1P03886 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.35□□□□□ -2.03
MT-ND1P03886 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms