Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC112492.4-201ENST00000456549 352 ntBASIC0.96□□□□□ -2.26
COL1A1P02452 FCF1P6-201ENST00000456841 595 ntBASIC0.96□□□□□ -2.26
COL1A1P02452 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.96□□□□□ -2.26
COL1A1P02452 AC121161.1-201ENST00000510606 652 ntBASIC0.96□□□□□ -2.26
COL1A1P02452 AP001485.1-201ENST00000604799 199 ntBASIC0.96□□□□□ -2.26
COL1A1P02452 DUSP12P1-201ENST00000612874 516 ntBASIC0.96□□□□□ -2.26
COL1A1P02452 AC084824.4-201ENST00000620106 731 ntBASIC0.96□□□□□ -2.26
COL1A1P02452 AL157770.1-201ENST00000623049 439 ntBASIC0.96□□□□□ -2.26
COL1A1P02452 AC079416.3-201ENST00000624479 549 ntBASIC0.96□□□□□ -2.26
COL1A1P02452 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.96□□□□□ -2.26
COL1A1P02452 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
COL1A1P02452 RNU11-3P-201ENST00000391111 133 ntBASIC0.95□□□□□ -2.26
COL1A1P02452 MIR1302-8-201ENST00000408342 128 ntBASIC0.95□□□□□ -2.26
COL1A1P02452 MTND1P21-201ENST00000412991 285 ntBASIC0.95□□□□□ -2.26
COL1A1P02452 BX664727.1-201ENST00000416024 466 ntBASIC0.95□□□□□ -2.26
COL1A1P02452 AL139421.1-201ENST00000423010 169 ntBASIC0.95□□□□□ -2.26
COL1A1P02452 AL354941.1-201ENST00000438600 464 ntBASIC0.95□□□□□ -2.26
COL1A1P02452 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.95□□□□□ -2.26
COL1A1P02452 MTND1P9-201ENST00000453775 944 ntBASIC0.95□□□□□ -2.26
COL1A1P02452 snoU13.8-201ENST00000458890 104 ntBASIC0.95□□□□□ -2.26
COL1A1P02452 TMEM251P1-201ENST00000503717 318 ntBASIC0.95□□□□□ -2.26
COL1A1P02452 MTCYBP16-201ENST00000509187 1129 ntBASIC0.95□□□□□ -2.26
COL1A1P02452 SNORA48.11-201ENST00000517015 89 ntBASIC0.95□□□□□ -2.26
COL1A1P02452 RNA5SP290-201ENST00000517133 127 ntBASIC0.95□□□□□ -2.26
COL1A1P02452 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.95□□□□□ -2.26
COL1A1P02452 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.95□□□□□ -2.26
COL1A1P02452 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.95□□□□□ -2.26
COL1A1P02452 CYB5AP5-201ENST00000549779 389 ntBASIC0.95□□□□□ -2.26
COL1A1P02452 AC138915.2-201ENST00000569776 97 ntBASIC0.95□□□□□ -2.26
COL1A1P02452 AC012213.3-201ENST00000577199 777 ntBASIC0.95□□□□□ -2.26
COL1A1P02452 MIR4422-201ENST00000581938 83 ntBASIC0.95□□□□□ -2.26
COL1A1P02452 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.95□□□□□ -2.26
COL1A1P02452 AL390208.1-201ENST00000605885 644 ntBASIC0.95□□□□□ -2.26
COL1A1P02452 AC107075.1-201ENST00000613695 314 ntBASIC0.95□□□□□ -2.26
COL1A1P02452 AL118556.2-201ENST00000614375 824 ntBASIC0.95□□□□□ -2.26
COL1A1P02452 AC010133.1-201ENST00000615809 842 ntBASIC0.95□□□□□ -2.26
COL1A1P02452 AL109620.1-201ENST00000618738 1197 ntBASIC0.95□□□□□ -2.26
COL1A1P02452 AC004808.1-201ENST00000627671 721 ntBASIC0.95□□□□□ -2.26
COL1A1P02452 AL138713.1-201ENST00000624026 2130 ntBASIC0.94□□□□□ -2.26
COL1A1P02452 ZNF29P-201ENST00000225587 168 ntBASIC0.94□□□□□ -2.26
COL1A1P02452 Y_RNA.274-201ENST00000364714 101 ntBASIC0.94□□□□□ -2.26
COL1A1P02452 MIR1283-2-201ENST00000408621 87 ntBASIC0.94□□□□□ -2.26
COL1A1P02452 AC007435.1-201ENST00000421086 415 ntBASIC0.94□□□□□ -2.26
COL1A1P02452 PTGES3P4-201ENST00000426243 356 ntBASIC0.94□□□□□ -2.26
COL1A1P02452 MTND4P6-201ENST00000438297 472 ntBASIC0.94□□□□□ -2.26
COL1A1P02452 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.94□□□□□ -2.26
COL1A1P02452 PTENP1-201ENST00000447117 1215 ntBASIC0.94□□□□□ -2.26
COL1A1P02452 MTND2P30-201ENST00000456663 382 ntBASIC0.94□□□□□ -2.26
COL1A1P02452 AC006512.1-201ENST00000468816 291 ntBASIC0.94□□□□□ -2.26
COL1A1P02452 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.94□□□□□ -2.26
COL1A1P02452 AC018868.1-201ENST00000491307 315 ntBASIC0.94□□□□□ -2.26
COL1A1P02452 SNORA25.11-201ENST00000515935 105 ntBASIC0.94□□□□□ -2.26
COL1A1P02452 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
COL1A1P02452 RRN3P3-201ENST00000549207 578 ntBASIC0.94□□□□□ -2.26
COL1A1P02452 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.94□□□□□ -2.26
COL1A1P02452 AC133485.1-201ENST00000567176 124 ntBASIC0.94□□□□□ -2.26
COL1A1P02452 AC138907.6-201ENST00000568401 126 ntBASIC0.94□□□□□ -2.26
COL1A1P02452 AL357094.1-201ENST00000603845 844 ntBASIC0.94□□□□□ -2.26
COL1A1P02452 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.94□□□□□ -2.26
COL1A1P02452 AC097460.3-201ENST00000623099 442 ntBASIC0.94□□□□□ -2.26
COL1A1P02452 AP003476.1-201ENST00000623984 516 ntBASIC0.94□□□□□ -2.26
COL1A1P02452 AC019226.1-201ENST00000625666 515 ntBASIC0.94□□□□□ -2.26
COL1A1P02452 MIR1322-201ENST00000638013 71 ntBASIC0.94□□□□□ -2.26
COL1A1P02452 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
COL1A1P02452 RNU6-223P-201ENST00000362830 107 ntBASIC0.93□□□□□ -2.26
COL1A1P02452 RPL26P27-201ENST00000414397 437 ntBASIC0.93□□□□□ -2.26
COL1A1P02452 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.93□□□□□ -2.26
COL1A1P02452 AL451054.2-201ENST00000420896 202 ntBASIC0.93□□□□□ -2.26
COL1A1P02452 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.93□□□□□ -2.26
COL1A1P02452 DPRXP1-201ENST00000426312 460 ntBASIC0.93□□□□□ -2.26
COL1A1P02452 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.93□□□□□ -2.26
COL1A1P02452 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.93□□□□□ -2.26
COL1A1P02452 PTGES3P1-201ENST00000439531 483 ntBASIC0.93□□□□□ -2.26
COL1A1P02452 MTCO3P43-201ENST00000440974 771 ntBASIC0.93□□□□□ -2.26
COL1A1P02452 SEPT14P24-201ENST00000447236 180 ntBASIC0.93□□□□□ -2.26
COL1A1P02452 MTND2P3-201ENST00000452458 470 ntBASIC0.93□□□□□ -2.26
COL1A1P02452 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.93□□□□□ -2.26
COL1A1P02452 AC099513.1-201ENST00000490423 301 ntBASIC0.93□□□□□ -2.26
COL1A1P02452 AC114981.1-201ENST00000503897 678 ntBASIC0.93□□□□□ -2.26
COL1A1P02452 AC104806.1-201ENST00000508720 308 ntBASIC0.93□□□□□ -2.26
COL1A1P02452 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.93□□□□□ -2.26
COL1A1P02452 AP003497.1-201ENST00000528472 562 ntBASIC0.93□□□□□ -2.26
COL1A1P02452 ROCK1P1-201ENST00000573767 549 ntBASIC0.93□□□□□ -2.26
COL1A1P02452 MIR4711-201ENST00000578274 70 ntBASIC0.93□□□□□ -2.26
COL1A1P02452 AC010900.2-201ENST00000604508 210 ntBASIC0.93□□□□□ -2.26
COL1A1P02452 ELOCP5-201ENST00000604924 333 ntBASIC0.93□□□□□ -2.26
COL1A1P02452 AL139344.1-201ENST00000605228 195 ntBASIC0.93□□□□□ -2.26
COL1A1P02452 AC026741.1-201ENST00000605892 482 ntBASIC0.93□□□□□ -2.26
COL1A1P02452 AC009268.2-201ENST00000621925 457 ntBASIC0.93□□□□□ -2.26
COL1A1P02452 AC090517.3-201ENST00000625170 141 ntBASIC0.93□□□□□ -2.26
COL1A1P02452 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
COL1A1P02452 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.93□□□□□ -2.26
COL1A1P02452 ZNF680P1-201ENST00000436625 1469 ntBASIC0.93□□□□□ -2.26
COL1A1P02452 Y_RNA.245-201ENST00000364493 95 ntBASIC0.92□□□□□ -2.26
COL1A1P02452 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.92□□□□□ -2.26
COL1A1P02452 ELOCP14-201ENST00000428070 331 ntBASIC0.92□□□□□ -2.26
COL1A1P02452 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.92□□□□□ -2.26
COL1A1P02452 AL353706.1-201ENST00000436728 494 ntBASIC0.92□□□□□ -2.26
COL1A1P02452 ELOCP7-201ENST00000439968 331 ntBASIC0.92□□□□□ -2.26
COL1A1P02452 AC079448.1-201ENST00000449377 373 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms