Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AL138880.2-201ENST00000616214 239 ntBASIC2.92□□□□□ -1.94
LDLRP01130 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
LDLRP01130 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
LDLRP01130 OR4G1P-203ENST00000641984 1631 ntBASIC2.92□□□□□ -1.94
LDLRP01130 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.92□□□□□ -1.94
LDLRP01130 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
LDLRP01130 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.92□□□□□ -1.94
LDLRP01130 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.91□□□□□ -1.94
LDLRP01130 AP003122.5-201ENST00000527668 3766 ntBASIC2.91□□□□□ -1.94
LDLRP01130 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
LDLRP01130 RNU6-270P-201ENST00000364131 105 ntBASIC2.91□□□□□ -1.94
LDLRP01130 RNU6-996P-201ENST00000365438 107 ntBASIC2.91□□□□□ -1.94
LDLRP01130 SNORA32.2-201ENST00000384049 122 ntBASIC2.91□□□□□ -1.94
LDLRP01130 RNA5SP252-201ENST00000391131 119 ntBASIC2.91□□□□□ -1.94
LDLRP01130 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.91□□□□□ -1.94
LDLRP01130 MTCYBP8-201ENST00000422855 651 ntBASIC2.91□□□□□ -1.94
LDLRP01130 HMGB1P18-201ENST00000438801 619 ntBASIC2.91□□□□□ -1.94
LDLRP01130 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.91□□□□□ -1.94
LDLRP01130 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.91□□□□□ -1.94
LDLRP01130 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.91□□□□□ -1.94
LDLRP01130 RPS15AP34-201ENST00000487776 387 ntBASIC2.91□□□□□ -1.94
LDLRP01130 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.91□□□□□ -1.94
LDLRP01130 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
LDLRP01130 AC092436.1-201ENST00000506450 503 ntBASIC2.91□□□□□ -1.94
LDLRP01130 RNU6-327P-201ENST00000516270 127 ntBASIC2.91□□□□□ -1.94
LDLRP01130 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.91□□□□□ -1.94
LDLRP01130 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.91□□□□□ -1.94
LDLRP01130 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.91□□□□□ -1.94
LDLRP01130 NUTF2P8-201ENST00000604593 363 ntBASIC2.91□□□□□ -1.94
LDLRP01130 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
LDLRP01130 AC018692.3-201ENST00000623929 123 ntBASIC2.91□□□□□ -1.94
LDLRP01130 AL133216.2-202ENST00000634512 349 ntBASIC2.91□□□□□ -1.94
LDLRP01130 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.91□□□□□ -1.94
LDLRP01130 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.91□□□□□ -1.94
LDLRP01130 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.91□□□□□ -1.94
LDLRP01130 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.91□□□□□ -1.94
LDLRP01130 AC103710.2-202ENST00000641454 2853 ntBASIC2.91□□□□□ -1.94
LDLRP01130 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.91□□□□□ -1.94
LDLRP01130 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.91□□□□□ -1.94
LDLRP01130 ASNSP3-201ENST00000451989 1306 ntBASIC2.91□□□□□ -1.94
LDLRP01130 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.91□□□□□ -1.94
LDLRP01130 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
LDLRP01130 RNU6-217P-201ENST00000384164 104 ntBASIC2.9□□□□□ -1.95
LDLRP01130 RNU6-1035P-201ENST00000384477 107 ntBASIC2.9□□□□□ -1.95
LDLRP01130 RNU6-831P-201ENST00000384548 107 ntBASIC2.9□□□□□ -1.95
LDLRP01130 MIR514A2-201ENST00000385131 88 ntBASIC2.9□□□□□ -1.95
LDLRP01130 MIR514A3-201ENST00000385132 88 ntBASIC2.9□□□□□ -1.95
LDLRP01130 RNU6-510P-201ENST00000391239 108 ntBASIC2.9□□□□□ -1.95
LDLRP01130 SNORA75.4-201ENST00000391278 119 ntBASIC2.9□□□□□ -1.95
LDLRP01130 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.9□□□□□ -1.95
LDLRP01130 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.9□□□□□ -1.95
LDLRP01130 AL139281.1-201ENST00000422120 335 ntBASIC2.9□□□□□ -1.95
LDLRP01130 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.9□□□□□ -1.95
LDLRP01130 SNRPEP9-201ENST00000436794 238 ntBASIC2.9□□□□□ -1.95
LDLRP01130 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.9□□□□□ -1.95
LDLRP01130 MTND3P16-201ENST00000452205 344 ntBASIC2.9□□□□□ -1.95
LDLRP01130 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.9□□□□□ -1.95
LDLRP01130 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.9□□□□□ -1.95
LDLRP01130 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.9□□□□□ -1.95
LDLRP01130 SUMO2P6-201ENST00000505273 288 ntBASIC2.9□□□□□ -1.95
LDLRP01130 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.9□□□□□ -1.95
LDLRP01130 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.9□□□□□ -1.95
LDLRP01130 AC008885.1-201ENST00000514930 301 ntBASIC2.9□□□□□ -1.95
LDLRP01130 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.9□□□□□ -1.95
LDLRP01130 AP005435.4-201ENST00000529514 284 ntBASIC2.9□□□□□ -1.95
LDLRP01130 AP000867.2-201ENST00000532468 320 ntBASIC2.9□□□□□ -1.95
LDLRP01130 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.9□□□□□ -1.95
LDLRP01130 AC026464.5-201ENST00000562497 722 ntBASIC2.9□□□□□ -1.95
LDLRP01130 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.9□□□□□ -1.95
LDLRP01130 MIR2682-201ENST00000580305 110 ntBASIC2.9□□□□□ -1.95
LDLRP01130 RNU6-89P-201ENST00000606519 100 ntBASIC2.9□□□□□ -1.95
LDLRP01130 AC073308.1-201ENST00000623696 305 ntBASIC2.9□□□□□ -1.95
LDLRP01130 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
LDLRP01130 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
LDLRP01130 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
LDLRP01130 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.9□□□□□ -1.95
LDLRP01130 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
LDLRP01130 GABRG2-229ENST00000641017 3628 ntBASIC2.89□□□□□ -1.95
LDLRP01130 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LDLRP01130 SNORA63C-201ENST00000364578 129 ntBASIC2.89□□□□□ -1.95
LDLRP01130 Y_RNA.431-201ENST00000384086 102 ntBASIC2.89□□□□□ -1.95
LDLRP01130 RNU6-738P-201ENST00000384531 106 ntBASIC2.89□□□□□ -1.95
LDLRP01130 Y_RNA.534-201ENST00000384599 112 ntBASIC2.89□□□□□ -1.95
LDLRP01130 AL445529.1-201ENST00000398713 389 ntBASIC2.89□□□□□ -1.95
LDLRP01130 RNU2-68P-201ENST00000410878 191 ntBASIC2.89□□□□□ -1.95
LDLRP01130 RNU6-387P-201ENST00000411331 105 ntBASIC2.89□□□□□ -1.95
LDLRP01130 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.89□□□□□ -1.95
LDLRP01130 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.89□□□□□ -1.95
LDLRP01130 AC080125.1-201ENST00000414888 684 ntBASIC2.89□□□□□ -1.95
LDLRP01130 OR6C66P-201ENST00000414917 930 ntBASIC2.89□□□□□ -1.95
LDLRP01130 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.89□□□□□ -1.95
LDLRP01130 AC099548.1-201ENST00000421443 426 ntBASIC2.89□□□□□ -1.95
LDLRP01130 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.89□□□□□ -1.95
LDLRP01130 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.89□□□□□ -1.95
LDLRP01130 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LDLRP01130 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.89□□□□□ -1.95
LDLRP01130 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.89□□□□□ -1.95
LDLRP01130 AL118520.1-201ENST00000450770 291 ntBASIC2.89□□□□□ -1.95
LDLRP01130 FABP5P15-201ENST00000453566 214 ntBASIC2.89□□□□□ -1.95
LDLRP01130 AC010099.1-201ENST00000455434 375 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms