Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 RN7SL604P-201ENST00000492589 296 ntBASIC4.49□□□□□ -1.69
PRPF40AO75400 RPS27AP10-201ENST00000496103 208 ntBASIC4.49□□□□□ -1.69
PRPF40AO75400 RNA5SP315-201ENST00000516340 116 ntBASIC4.49□□□□□ -1.69
PRPF40AO75400 RNA5SP312-201ENST00000517068 116 ntBASIC4.49□□□□□ -1.69
PRPF40AO75400 Y_RNA.715-201ENST00000517082 110 ntBASIC4.49□□□□□ -1.69
PRPF40AO75400 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.49□□□□□ -1.69
PRPF40AO75400 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.49□□□□□ -1.69
PRPF40AO75400 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.49□□□□□ -1.69
PRPF40AO75400 RN7SL600P-201ENST00000581811 299 ntBASIC4.49□□□□□ -1.69
PRPF40AO75400 MIR3609-201ENST00000582661 80 ntBASIC4.49□□□□□ -1.69
PRPF40AO75400 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.49□□□□□ -1.69
PRPF40AO75400 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.49□□□□□ -1.69
PRPF40AO75400 AL021879.1-201ENST00000611756 288 ntBASIC4.49□□□□□ -1.69
PRPF40AO75400 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PRPF40AO75400 AC010733.2-201ENST00000589496 5702 ntBASIC4.49□□□□□ -1.69
PRPF40AO75400 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.49□□□□□ -1.69
PRPF40AO75400 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PRPF40AO75400 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.49□□□□□ -1.69
PRPF40AO75400 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PRPF40AO75400 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PRPF40AO75400 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
PRPF40AO75400 RNU6-858P-201ENST00000362436 107 ntBASIC4.48□□□□□ -1.69
PRPF40AO75400 RNU6-942P-201ENST00000363002 107 ntBASIC4.48□□□□□ -1.69
PRPF40AO75400 Y_RNA.193-201ENST00000363979 102 ntBASIC4.48□□□□□ -1.69
PRPF40AO75400 RNU6-505P-201ENST00000384427 107 ntBASIC4.48□□□□□ -1.69
PRPF40AO75400 SNORA51.11-201ENST00000384442 131 ntBASIC4.48□□□□□ -1.69
PRPF40AO75400 RNU1-13P-201ENST00000384499 162 ntBASIC4.48□□□□□ -1.69
PRPF40AO75400 MTCYBP2-201ENST00000407745 171 ntBASIC4.48□□□□□ -1.69
PRPF40AO75400 RAB9AP3-201ENST00000412737 573 ntBASIC4.48□□□□□ -1.69
PRPF40AO75400 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.48□□□□□ -1.69
PRPF40AO75400 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.48□□□□□ -1.69
PRPF40AO75400 RAB9AP1-201ENST00000449393 573 ntBASIC4.48□□□□□ -1.69
PRPF40AO75400 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.48□□□□□ -1.69
PRPF40AO75400 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.48□□□□□ -1.69
PRPF40AO75400 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.48□□□□□ -1.69
PRPF40AO75400 RNA5SP309-201ENST00000516670 106 ntBASIC4.48□□□□□ -1.69
PRPF40AO75400 AC091144.1-201ENST00000519573 138 ntBASIC4.48□□□□□ -1.69
PRPF40AO75400 SYF2P1-201ENST00000550658 413 ntBASIC4.48□□□□□ -1.69
PRPF40AO75400 HIGD1AP1-201ENST00000550979 275 ntBASIC4.48□□□□□ -1.69
PRPF40AO75400 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.48□□□□□ -1.69
PRPF40AO75400 MIR4644-201ENST00000579929 84 ntBASIC4.48□□□□□ -1.69
PRPF40AO75400 AC244505.7-201ENST00000599675 272 ntBASIC4.48□□□□□ -1.69
PRPF40AO75400 RPS29P30-201ENST00000600975 111 ntBASIC4.48□□□□□ -1.69
PRPF40AO75400 AC002076.2-201ENST00000617362 122 ntBASIC4.48□□□□□ -1.69
PRPF40AO75400 AC112484.5-201ENST00000624189 228 ntBASIC4.48□□□□□ -1.69
PRPF40AO75400 AC241585.2-209ENST00000638217 143 ntBASIC4.48□□□□□ -1.69
PRPF40AO75400 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.48□□□□□ -1.69
PRPF40AO75400 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PRPF40AO75400 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.48□□□□□ -1.69
PRPF40AO75400 AC007656.2-201ENST00000624902 4547 ntBASIC4.47□□□□□ -1.69
PRPF40AO75400 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.47□□□□□ -1.69
PRPF40AO75400 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PRPF40AO75400 AC032011.1-201ENST00000611703 1549 ntBASIC4.47□□□□□ -1.69
PRPF40AO75400 ADAM3A-203ENST00000461344 2157 ntBASIC4.47□□□□□ -1.69
PRPF40AO75400 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
PRPF40AO75400 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.47□□□□□ -1.69
PRPF40AO75400 SPRR2C-201ENST00000290702 219 ntBASIC4.47□□□□□ -1.69
PRPF40AO75400 RNU1-100P-201ENST00000365255 165 ntBASIC4.47□□□□□ -1.69
PRPF40AO75400 RNU6-1109P-201ENST00000391187 107 ntBASIC4.47□□□□□ -1.69
PRPF40AO75400 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PRPF40AO75400 Y_RNA.618-201ENST00000410949 107 ntBASIC4.47□□□□□ -1.69
PRPF40AO75400 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.47□□□□□ -1.69
PRPF40AO75400 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.47□□□□□ -1.69
PRPF40AO75400 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.47□□□□□ -1.69
PRPF40AO75400 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.47□□□□□ -1.69
PRPF40AO75400 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PRPF40AO75400 RPL30P14-201ENST00000482744 348 ntBASIC4.47□□□□□ -1.69
PRPF40AO75400 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.47□□□□□ -1.69
PRPF40AO75400 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.47□□□□□ -1.69
PRPF40AO75400 AL451007.1-201ENST00000595491 289 ntBASIC4.47□□□□□ -1.69
PRPF40AO75400 MIR6076-201ENST00000617521 113 ntBASIC4.47□□□□□ -1.69
PRPF40AO75400 AC024581.2-201ENST00000619986 252 ntBASIC4.47□□□□□ -1.69
PRPF40AO75400 RNA5SP196-201ENST00000625967 102 ntBASIC4.47□□□□□ -1.69
PRPF40AO75400 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.47□□□□□ -1.69
PRPF40AO75400 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PRPF40AO75400 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.47□□□□□ -1.69
PRPF40AO75400 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PRPF40AO75400 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PRPF40AO75400 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.46□□□□□ -1.7
PRPF40AO75400 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
PRPF40AO75400 AC073073.2-201ENST00000609827 2578 ntBASIC4.46□□□□□ -1.7
PRPF40AO75400 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PRPF40AO75400 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PRPF40AO75400 RNU6-270P-201ENST00000364131 105 ntBASIC4.46□□□□□ -1.7
PRPF40AO75400 RNU4-50P-201ENST00000364361 141 ntBASIC4.46□□□□□ -1.7
PRPF40AO75400 RNU6-1280P-201ENST00000365211 107 ntBASIC4.46□□□□□ -1.7
PRPF40AO75400 SNORA63.7-201ENST00000365579 123 ntBASIC4.46□□□□□ -1.7
PRPF40AO75400 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PRPF40AO75400 RNA5SP44-201ENST00000410446 133 ntBASIC4.46□□□□□ -1.7
PRPF40AO75400 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.46□□□□□ -1.7
PRPF40AO75400 MTCO3P29-201ENST00000432119 779 ntBASIC4.46□□□□□ -1.7
PRPF40AO75400 AC012308.1-201ENST00000451232 178 ntBASIC4.46□□□□□ -1.7
PRPF40AO75400 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PRPF40AO75400 RPS29P20-201ENST00000489592 171 ntBASIC4.46□□□□□ -1.7
PRPF40AO75400 RNU7-175P-201ENST00000515915 61 ntBASIC4.46□□□□□ -1.7
PRPF40AO75400 AC009812.2-201ENST00000517657 457 ntBASIC4.46□□□□□ -1.7
PRPF40AO75400 AC110588.1-201ENST00000559699 137 ntBASIC4.46□□□□□ -1.7
PRPF40AO75400 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PRPF40AO75400 VN1R85P-201ENST00000601587 426 ntBASIC4.46□□□□□ -1.7
PRPF40AO75400 AC006077.1-201ENST00000604746 343 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms