Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 BCRP9-201ENST00000605312 388 ntBASIC1.75□□□□□ -2.13
NPHP4O75161 MIR98-201ENST00000606724 119 ntBASIC1.75□□□□□ -2.13
NPHP4O75161 RNU4-5P-201ENST00000607255 135 ntBASIC1.75□□□□□ -2.13
NPHP4O75161 AC011939.3-201ENST00000613686 466 ntBASIC1.75□□□□□ -2.13
NPHP4O75161 U6.99-201ENST00000637524 83 ntBASIC1.75□□□□□ -2.13
NPHP4O75161 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.75□□□□□ -2.13
NPHP4O75161 RNU6-278P-201ENST00000390945 109 ntBASIC1.74□□□□□ -2.13
NPHP4O75161 AL022400.1-201ENST00000423946 935 ntBASIC1.74□□□□□ -2.13
NPHP4O75161 AC092648.1-201ENST00000425870 423 ntBASIC1.74□□□□□ -2.13
NPHP4O75161 PSPHP1-201ENST00000450062 261 ntBASIC1.74□□□□□ -2.13
NPHP4O75161 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.74□□□□□ -2.13
NPHP4O75161 AC011005.2-201ENST00000487324 359 ntBASIC1.74□□□□□ -2.13
NPHP4O75161 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
NPHP4O75161 RNA5SP61-201ENST00000516453 100 ntBASIC1.74□□□□□ -2.13
NPHP4O75161 RNU6-113P-201ENST00000516653 101 ntBASIC1.74□□□□□ -2.13
NPHP4O75161 SNORD19.2-201ENST00000516978 73 ntBASIC1.74□□□□□ -2.13
NPHP4O75161 RNU6-1183P-201ENST00000517054 60 ntBASIC1.74□□□□□ -2.13
NPHP4O75161 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.74□□□□□ -2.13
NPHP4O75161 DEFB108A-201ENST00000530110 222 ntBASIC1.74□□□□□ -2.13
NPHP4O75161 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.74□□□□□ -2.13
NPHP4O75161 AC107214.2-201ENST00000608204 634 ntBASIC1.74□□□□□ -2.13
NPHP4O75161 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.74□□□□□ -2.13
NPHP4O75161 AP000484.1-201ENST00000620067 1252 ntBASIC1.74□□□□□ -2.13
NPHP4O75161 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.74□□□□□ -2.13
NPHP4O75161 AC099654.9-201ENST00000637055 678 ntBASIC1.74□□□□□ -2.13
NPHP4O75161 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
NPHP4O75161 AL359854.1-201ENST00000614203 1594 ntBASIC1.74□□□□□ -2.13
NPHP4O75161 RNU6-188P-201ENST00000364207 107 ntBASIC1.74□□□□□ -2.13
NPHP4O75161 SNORA18.2-201ENST00000383865 132 ntBASIC1.74□□□□□ -2.13
NPHP4O75161 RNU6-769P-201ENST00000384407 104 ntBASIC1.74□□□□□ -2.13
NPHP4O75161 RNU1-148P-201ENST00000384472 162 ntBASIC1.74□□□□□ -2.13
NPHP4O75161 RNU6-1176P-201ENST00000390955 107 ntBASIC1.74□□□□□ -2.13
NPHP4O75161 AC078974.1-201ENST00000411597 223 ntBASIC1.74□□□□□ -2.13
NPHP4O75161 OR51A5P-201ENST00000415429 942 ntBASIC1.74□□□□□ -2.13
NPHP4O75161 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.74□□□□□ -2.13
NPHP4O75161 PTGES3P4-201ENST00000426243 356 ntBASIC1.74□□□□□ -2.13
NPHP4O75161 AC093106.2-201ENST00000428212 385 ntBASIC1.74□□□□□ -2.13
NPHP4O75161 MTND4P25-201ENST00000441039 533 ntBASIC1.74□□□□□ -2.13
NPHP4O75161 AL031313.1-201ENST00000448435 256 ntBASIC1.74□□□□□ -2.13
NPHP4O75161 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.74□□□□□ -2.13
NPHP4O75161 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.74□□□□□ -2.13
NPHP4O75161 HMGB3P17-201ENST00000504195 649 ntBASIC1.74□□□□□ -2.13
NPHP4O75161 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.74□□□□□ -2.13
NPHP4O75161 SNORA31.3-201ENST00000516029 96 ntBASIC1.74□□□□□ -2.13
NPHP4O75161 MIR892C-201ENST00000516410 77 ntBASIC1.74□□□□□ -2.13
NPHP4O75161 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.74□□□□□ -2.13
NPHP4O75161 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.74□□□□□ -2.13
NPHP4O75161 AL133241.1-201ENST00000556832 487 ntBASIC1.74□□□□□ -2.13
NPHP4O75161 RNU6-88P-201ENST00000606801 100 ntBASIC1.74□□□□□ -2.13
NPHP4O75161 AC072039.2-201ENST00000608883 439 ntBASIC1.74□□□□□ -2.13
NPHP4O75161 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.74□□□□□ -2.13
NPHP4O75161 AC091932.3-201ENST00000624223 323 ntBASIC1.74□□□□□ -2.13
NPHP4O75161 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
NPHP4O75161 ZNF29P-201ENST00000225587 168 ntBASIC1.73□□□□□ -2.13
NPHP4O75161 RNU4-91P-201ENST00000364778 135 ntBASIC1.73□□□□□ -2.13
NPHP4O75161 RNU1-133P-201ENST00000364867 167 ntBASIC1.73□□□□□ -2.13
NPHP4O75161 SNORA46.1-201ENST00000391069 153 ntBASIC1.73□□□□□ -2.13
NPHP4O75161 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.73□□□□□ -2.13
NPHP4O75161 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.73□□□□□ -2.13
NPHP4O75161 AC007098.1-201ENST00000420122 367 ntBASIC1.73□□□□□ -2.13
NPHP4O75161 RPL31P63-201ENST00000422565 375 ntBASIC1.73□□□□□ -2.13
NPHP4O75161 RPS3AP44-201ENST00000425466 790 ntBASIC1.73□□□□□ -2.13
NPHP4O75161 LARP1BP3-201ENST00000437229 869 ntBASIC1.73□□□□□ -2.13
NPHP4O75161 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.73□□□□□ -2.13
NPHP4O75161 AC104685.1-201ENST00000502445 371 ntBASIC1.73□□□□□ -2.13
NPHP4O75161 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.73□□□□□ -2.13
NPHP4O75161 MIR4509-3-201ENST00000578671 94 ntBASIC1.73□□□□□ -2.13
NPHP4O75161 AC022662.1-201ENST00000580252 331 ntBASIC1.73□□□□□ -2.13
NPHP4O75161 MIR4509-2-201ENST00000583920 94 ntBASIC1.73□□□□□ -2.13
NPHP4O75161 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.73□□□□□ -2.13
NPHP4O75161 AC022202.1-201ENST00000613515 211 ntBASIC1.73□□□□□ -2.13
NPHP4O75161 MIR4509-1-201ENST00000618224 94 ntBASIC1.73□□□□□ -2.13
NPHP4O75161 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.73□□□□□ -2.13
NPHP4O75161 MTND5P30-201ENST00000452896 1731 ntBASIC1.73□□□□□ -2.13
NPHP4O75161 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.72□□□□□ -2.13
NPHP4O75161 MIR17-201ENST00000385012 84 ntBASIC1.72□□□□□ -2.13
NPHP4O75161 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
NPHP4O75161 CIR1P3-201ENST00000405137 479 ntBASIC1.72□□□□□ -2.13
NPHP4O75161 FCF1P10-201ENST00000407590 479 ntBASIC1.72□□□□□ -2.13
NPHP4O75161 U6atac.2-201ENST00000408644 118 ntBASIC1.72□□□□□ -2.13
NPHP4O75161 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.72□□□□□ -2.13
NPHP4O75161 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.72□□□□□ -2.13
NPHP4O75161 AIMP1P2-201ENST00000425294 312 ntBASIC1.72□□□□□ -2.13
NPHP4O75161 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.72□□□□□ -2.13
NPHP4O75161 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.72□□□□□ -2.13
NPHP4O75161 NEFMP1-201ENST00000443423 1006 ntBASIC1.72□□□□□ -2.13
NPHP4O75161 AL049829.1-201ENST00000465411 156 ntBASIC1.72□□□□□ -2.13
NPHP4O75161 FO393415.2-201ENST00000480085 343 ntBASIC1.72□□□□□ -2.13
NPHP4O75161 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.72□□□□□ -2.13
NPHP4O75161 HSPE1P23-201ENST00000509838 286 ntBASIC1.72□□□□□ -2.13
NPHP4O75161 AF213884.2-201ENST00000510417 903 ntBASIC1.72□□□□□ -2.13
NPHP4O75161 MRPS36P5-201ENST00000551909 298 ntBASIC1.72□□□□□ -2.13
NPHP4O75161 AC012213.3-201ENST00000577199 777 ntBASIC1.72□□□□□ -2.13
NPHP4O75161 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.72□□□□□ -2.13
NPHP4O75161 AL355598.1-201ENST00000604169 202 ntBASIC1.72□□□□□ -2.13
NPHP4O75161 AC007363.1-201ENST00000604736 620 ntBASIC1.72□□□□□ -2.13
NPHP4O75161 AL138963.2-201ENST00000605137 226 ntBASIC1.72□□□□□ -2.13
NPHP4O75161 AC091965.4-201ENST00000607691 587 ntBASIC1.72□□□□□ -2.13
NPHP4O75161 uc_338.14-201ENST00000613162 166 ntBASIC1.72□□□□□ -2.13
NPHP4O75161 AC009233.1-201ENST00000616477 371 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms