Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.93□□□□□ -1.94
LDB3O75112 ELOCP24-201ENST00000456370 334 ntBASIC2.93□□□□□ -1.94
LDB3O75112 RPL30P15-201ENST00000457129 321 ntBASIC2.93□□□□□ -1.94
LDB3O75112 AC130509.1-201ENST00000464158 433 ntBASIC2.93□□□□□ -1.94
LDB3O75112 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.93□□□□□ -1.94
LDB3O75112 KC877373.1-201ENST00000479066 408 ntBASIC2.93□□□□□ -1.94
LDB3O75112 MTCYBP40-201ENST00000509390 1135 ntBASIC2.93□□□□□ -1.94
LDB3O75112 HIGD1AP13-201ENST00000509878 289 ntBASIC2.93□□□□□ -1.94
LDB3O75112 RNA5SP290-201ENST00000517133 127 ntBASIC2.93□□□□□ -1.94
LDB3O75112 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.93□□□□□ -1.94
LDB3O75112 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.93□□□□□ -1.94
LDB3O75112 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.93□□□□□ -1.94
LDB3O75112 HMGB1P14-201ENST00000557424 591 ntBASIC2.93□□□□□ -1.94
LDB3O75112 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.93□□□□□ -1.94
LDB3O75112 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.93□□□□□ -1.94
LDB3O75112 MIR5004-201ENST00000579078 107 ntBASIC2.93□□□□□ -1.94
LDB3O75112 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.93□□□□□ -1.94
LDB3O75112 MIR3609-201ENST00000582661 80 ntBASIC2.93□□□□□ -1.94
LDB3O75112 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.93□□□□□ -1.94
LDB3O75112 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.93□□□□□ -1.94
LDB3O75112 AC007938.3-201ENST00000604965 623 ntBASIC2.93□□□□□ -1.94
LDB3O75112 AP000654.2-201ENST00000605633 586 ntBASIC2.93□□□□□ -1.94
LDB3O75112 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.93□□□□□ -1.94
LDB3O75112 AC008121.3-201ENST00000618726 433 ntBASIC2.93□□□□□ -1.94
LDB3O75112 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
LDB3O75112 FAM35BP-202ENST00000497389 3337 ntBASIC2.93□□□□□ -1.94
LDB3O75112 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LDB3O75112 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LDB3O75112 MTND5P19-201ENST00000424872 1794 ntBASIC2.92□□□□□ -1.94
LDB3O75112 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LDB3O75112 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
LDB3O75112 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LDB3O75112 Y_RNA.5-201ENST00000362334 102 ntBASIC2.92□□□□□ -1.94
LDB3O75112 RNA5SP374-201ENST00000362939 125 ntBASIC2.92□□□□□ -1.94
LDB3O75112 Y_RNA.333-201ENST00000365274 102 ntBASIC2.92□□□□□ -1.94
LDB3O75112 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LDB3O75112 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
LDB3O75112 RNU6-26P-201ENST00000383985 107 ntBASIC2.92□□□□□ -1.94
LDB3O75112 SNORA7.4-201ENST00000384249 137 ntBASIC2.92□□□□□ -1.94
LDB3O75112 SNORD15B-201ENST00000384714 146 ntBASIC2.92□□□□□ -1.94
LDB3O75112 MIR301A-201ENST00000385261 86 ntBASIC2.92□□□□□ -1.94
LDB3O75112 AL356057.3-201ENST00000402607 340 ntBASIC2.92□□□□□ -1.94
LDB3O75112 RPS4XP7-201ENST00000406274 780 ntBASIC2.92□□□□□ -1.94
LDB3O75112 Y_RNA.605-201ENST00000410577 105 ntBASIC2.92□□□□□ -1.94
LDB3O75112 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.92□□□□□ -1.94
LDB3O75112 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.92□□□□□ -1.94
LDB3O75112 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.92□□□□□ -1.94
LDB3O75112 AL592045.1-201ENST00000429867 352 ntBASIC2.92□□□□□ -1.94
LDB3O75112 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.92□□□□□ -1.94
LDB3O75112 RPL23AP69-201ENST00000431134 458 ntBASIC2.92□□□□□ -1.94
LDB3O75112 AL512844.2-201ENST00000433990 593 ntBASIC2.92□□□□□ -1.94
LDB3O75112 Z82210.1-201ENST00000440037 231 ntBASIC2.92□□□□□ -1.94
LDB3O75112 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.92□□□□□ -1.94
LDB3O75112 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.92□□□□□ -1.94
LDB3O75112 snoU13.22-201ENST00000459428 104 ntBASIC2.92□□□□□ -1.94
LDB3O75112 AC006445.1-201ENST00000491925 405 ntBASIC2.92□□□□□ -1.94
LDB3O75112 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.92□□□□□ -1.94
LDB3O75112 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
LDB3O75112 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.92□□□□□ -1.94
LDB3O75112 RNU6-120P-201ENST00000516077 103 ntBASIC2.92□□□□□ -1.94
LDB3O75112 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.92□□□□□ -1.94
LDB3O75112 RNU6-1069P-201ENST00000516612 133 ntBASIC2.92□□□□□ -1.94
LDB3O75112 RNU6-1282P-201ENST00000516735 96 ntBASIC2.92□□□□□ -1.94
LDB3O75112 AC022634.1-201ENST00000520765 532 ntBASIC2.92□□□□□ -1.94
LDB3O75112 AC068657.1-201ENST00000520807 306 ntBASIC2.92□□□□□ -1.94
LDB3O75112 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.92□□□□□ -1.94
LDB3O75112 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.92□□□□□ -1.94
LDB3O75112 SNRPGP18-201ENST00000553000 214 ntBASIC2.92□□□□□ -1.94
LDB3O75112 AC106782.4-201ENST00000568264 210 ntBASIC2.92□□□□□ -1.94
LDB3O75112 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
LDB3O75112 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.92□□□□□ -1.94
LDB3O75112 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.92□□□□□ -1.94
LDB3O75112 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.92□□□□□ -1.94
LDB3O75112 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.92□□□□□ -1.94
LDB3O75112 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.92□□□□□ -1.94
LDB3O75112 AL669831.3-213ENST00000636676 183 ntBASIC2.92□□□□□ -1.94
LDB3O75112 Z99571.1-201ENST00000636677 394 ntBASIC2.92□□□□□ -1.94
LDB3O75112 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LDB3O75112 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
LDB3O75112 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
LDB3O75112 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.92□□□□□ -1.94
LDB3O75112 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
LDB3O75112 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
LDB3O75112 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LDB3O75112 AL049641.1-201ENST00000441055 1948 ntBASIC2.91□□□□□ -1.94
LDB3O75112 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.91□□□□□ -1.94
LDB3O75112 AC073346.2-201ENST00000624724 2058 ntBASIC2.91□□□□□ -1.94
LDB3O75112 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
LDB3O75112 AC005183.1-201ENST00000603687 1979 ntBASIC2.91□□□□□ -1.94
LDB3O75112 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
LDB3O75112 MAPK10-322ENST00000641485 4530 ntBASIC2.91□□□□□ -1.94
LDB3O75112 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.91□□□□□ -1.94
LDB3O75112 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.91□□□□□ -1.94
LDB3O75112 Y_RNA.133-201ENST00000363428 110 ntBASIC2.91□□□□□ -1.94
LDB3O75112 Y_RNA.145-201ENST00000363527 102 ntBASIC2.91□□□□□ -1.94
LDB3O75112 SNORA14A-201ENST00000364773 135 ntBASIC2.91□□□□□ -1.94
LDB3O75112 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
LDB3O75112 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.91□□□□□ -1.94
LDB3O75112 Y_RNA.404-201ENST00000383978 102 ntBASIC2.91□□□□□ -1.94
LDB3O75112 Y_RNA.459-201ENST00000384251 102 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms