Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AP001324.2-201ENST00000461163 319 ntBASIC3.87□□□□□ -1.79
TRIM13O60858 RN7SL860P-201ENST00000473738 223 ntBASIC3.87□□□□□ -1.79
TRIM13O60858 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM13O60858 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.87□□□□□ -1.79
TRIM13O60858 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.87□□□□□ -1.79
TRIM13O60858 GMPSP1-201ENST00000514075 579 ntBASIC3.87□□□□□ -1.79
TRIM13O60858 RNU1-86P-201ENST00000516108 154 ntBASIC3.87□□□□□ -1.79
TRIM13O60858 RNU1-107P-201ENST00000516617 154 ntBASIC3.87□□□□□ -1.79
TRIM13O60858 SNORA31.22-201ENST00000517204 135 ntBASIC3.87□□□□□ -1.79
TRIM13O60858 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.87□□□□□ -1.79
TRIM13O60858 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM13O60858 AC104581.2-201ENST00000572227 430 ntBASIC3.87□□□□□ -1.79
TRIM13O60858 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM13O60858 BRDTP1-201ENST00000605735 677 ntBASIC3.87□□□□□ -1.79
TRIM13O60858 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.87□□□□□ -1.79
TRIM13O60858 AC004925.1-201ENST00000624256 2706 ntBASIC3.87□□□□□ -1.79
TRIM13O60858 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM13O60858 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
TRIM13O60858 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM13O60858 AL136964.1-201ENST00000622038 2990 ntBASIC3.87□□□□□ -1.79
TRIM13O60858 AL353746.1-201ENST00000566293 6881 ntBASIC3.86□□□□□ -1.79
TRIM13O60858 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM13O60858 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
TRIM13O60858 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.86□□□□□ -1.79
TRIM13O60858 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.86□□□□□ -1.79
TRIM13O60858 AC139713.2-214ENST00000642059 1811 ntBASIC3.86□□□□□ -1.79
TRIM13O60858 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM13O60858 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM13O60858 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM13O60858 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM13O60858 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM13O60858 MIR383-201ENST00000362257 73 ntBASIC3.86□□□□□ -1.79
TRIM13O60858 RNU6-173P-201ENST00000364215 104 ntBASIC3.86□□□□□ -1.79
TRIM13O60858 RNA5SP509-201ENST00000364577 119 ntBASIC3.86□□□□□ -1.79
TRIM13O60858 RNU6-215P-201ENST00000365169 102 ntBASIC3.86□□□□□ -1.79
TRIM13O60858 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM13O60858 SNORD78.2-201ENST00000391076 69 ntBASIC3.86□□□□□ -1.79
TRIM13O60858 RPL37P18-201ENST00000411602 243 ntBASIC3.86□□□□□ -1.79
TRIM13O60858 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM13O60858 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM13O60858 AL732292.1-201ENST00000426692 226 ntBASIC3.86□□□□□ -1.79
TRIM13O60858 MTATP6P4-201ENST00000427725 675 ntBASIC3.86□□□□□ -1.79
TRIM13O60858 MTCO1P5-201ENST00000433573 344 ntBASIC3.86□□□□□ -1.79
TRIM13O60858 AL772161.1-201ENST00000439130 476 ntBASIC3.86□□□□□ -1.79
TRIM13O60858 RANP8-201ENST00000444720 713 ntBASIC3.86□□□□□ -1.79
TRIM13O60858 AC011276.1-201ENST00000469688 323 ntBASIC3.86□□□□□ -1.79
TRIM13O60858 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.86□□□□□ -1.79
TRIM13O60858 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM13O60858 RNU6-1219P-201ENST00000516143 112 ntBASIC3.86□□□□□ -1.79
TRIM13O60858 AC008489.1-201ENST00000524271 483 ntBASIC3.86□□□□□ -1.79
TRIM13O60858 CASP1P1-201ENST00000526345 212 ntBASIC3.86□□□□□ -1.79
TRIM13O60858 CYCSP29-201ENST00000533731 318 ntBASIC3.86□□□□□ -1.79
TRIM13O60858 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM13O60858 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM13O60858 AC090877.1-201ENST00000561418 344 ntBASIC3.86□□□□□ -1.79
TRIM13O60858 MIR4644-201ENST00000579929 84 ntBASIC3.86□□□□□ -1.79
TRIM13O60858 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.86□□□□□ -1.79
TRIM13O60858 AL356218.2-201ENST00000605264 187 ntBASIC3.86□□□□□ -1.79
TRIM13O60858 AC024940.4-201ENST00000605507 246 ntBASIC3.86□□□□□ -1.79
TRIM13O60858 MIR6868-201ENST00000611215 58 ntBASIC3.86□□□□□ -1.79
TRIM13O60858 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM13O60858 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM13O60858 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.86□□□□□ -1.79
TRIM13O60858 MTND1P7-201ENST00000632801 297 ntBASIC3.86□□□□□ -1.79
TRIM13O60858 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
TRIM13O60858 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM13O60858 AC006504.1-201ENST00000562493 3666 ntBASIC3.86□□□□□ -1.79
TRIM13O60858 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM13O60858 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.85□□□□□ -1.79
TRIM13O60858 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.85□□□□□ -1.79
TRIM13O60858 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.85□□□□□ -1.79
TRIM13O60858 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM13O60858 AC007685.1-201ENST00000329806 452 ntBASIC3.85□□□□□ -1.79
TRIM13O60858 RNU6-335P-201ENST00000364563 113 ntBASIC3.85□□□□□ -1.79
TRIM13O60858 Y_RNA.275-201ENST00000364726 110 ntBASIC3.85□□□□□ -1.79
TRIM13O60858 RNA5SP235-201ENST00000365411 114 ntBASIC3.85□□□□□ -1.79
TRIM13O60858 Y_RNA.405-201ENST00000383979 100 ntBASIC3.85□□□□□ -1.79
TRIM13O60858 Y_RNA.451-201ENST00000384200 100 ntBASIC3.85□□□□□ -1.79
TRIM13O60858 Y_RNA.497-201ENST00000384447 98 ntBASIC3.85□□□□□ -1.79
TRIM13O60858 Y_RNA.524-201ENST00000384564 100 ntBASIC3.85□□□□□ -1.79
TRIM13O60858 Y_RNA.561-201ENST00000384694 100 ntBASIC3.85□□□□□ -1.79
TRIM13O60858 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
TRIM13O60858 Y_RNA.590-201ENST00000410140 107 ntBASIC3.85□□□□□ -1.79
TRIM13O60858 RNU2-61P-201ENST00000411069 191 ntBASIC3.85□□□□□ -1.79
TRIM13O60858 RPL23AP26-201ENST00000412728 464 ntBASIC3.85□□□□□ -1.79
TRIM13O60858 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM13O60858 AL096701.2-201ENST00000416920 238 ntBASIC3.85□□□□□ -1.79
TRIM13O60858 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.85□□□□□ -1.79
TRIM13O60858 USP9YP7-201ENST00000436723 430 ntBASIC3.85□□□□□ -1.79
TRIM13O60858 USP9YP32-201ENST00000452432 430 ntBASIC3.85□□□□□ -1.79
TRIM13O60858 U8.22-201ENST00000459141 133 ntBASIC3.85□□□□□ -1.79
TRIM13O60858 RNU7-87P-201ENST00000459343 62 ntBASIC3.85□□□□□ -1.79
TRIM13O60858 AC091167.1-201ENST00000492017 396 ntBASIC3.85□□□□□ -1.79
TRIM13O60858 RNU2-31P-201ENST00000516954 155 ntBASIC3.85□□□□□ -1.79
TRIM13O60858 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM13O60858 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM13O60858 FAM60BP-201ENST00000578364 658 ntBASIC3.85□□□□□ -1.79
TRIM13O60858 MIR4659A-201ENST00000580269 81 ntBASIC3.85□□□□□ -1.79
TRIM13O60858 AC004852.3-201ENST00000614131 326 ntBASIC3.85□□□□□ -1.79
TRIM13O60858 MIR3653-201ENST00000625572 110 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms