Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.58□□□□□ -1.84
CTNND1O60716 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.58□□□□□ -1.84
CTNND1O60716 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.58□□□□□ -1.84
CTNND1O60716 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CTNND1O60716 ADAM3A-203ENST00000461344 2157 ntBASIC3.58□□□□□ -1.84
CTNND1O60716 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CTNND1O60716 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.57□□□□□ -1.84
CTNND1O60716 RNU6-72P-201ENST00000384285 79 ntBASIC3.57□□□□□ -1.84
CTNND1O60716 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.57□□□□□ -1.84
CTNND1O60716 Y_RNA.604-201ENST00000410574 102 ntBASIC3.57□□□□□ -1.84
CTNND1O60716 AL096701.2-201ENST00000416920 238 ntBASIC3.57□□□□□ -1.84
CTNND1O60716 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.57□□□□□ -1.84
CTNND1O60716 RPS15AP5-201ENST00000436276 388 ntBASIC3.57□□□□□ -1.84
CTNND1O60716 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.57□□□□□ -1.84
CTNND1O60716 AL135938.1-201ENST00000443141 297 ntBASIC3.57□□□□□ -1.84
CTNND1O60716 RNU7-138P-201ENST00000459479 64 ntBASIC3.57□□□□□ -1.84
CTNND1O60716 AC117440.1-201ENST00000474107 571 ntBASIC3.57□□□□□ -1.84
CTNND1O60716 AC008628.2-201ENST00000502605 298 ntBASIC3.57□□□□□ -1.84
CTNND1O60716 AC083906.5-201ENST00000503722 328 ntBASIC3.57□□□□□ -1.84
CTNND1O60716 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.57□□□□□ -1.84
CTNND1O60716 AC113155.1-201ENST00000511141 769 ntBASIC3.57□□□□□ -1.84
CTNND1O60716 AC091826.1-201ENST00000514065 313 ntBASIC3.57□□□□□ -1.84
CTNND1O60716 RNA5SP367-201ENST00000516557 118 ntBASIC3.57□□□□□ -1.84
CTNND1O60716 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.57□□□□□ -1.84
CTNND1O60716 AC093331.1-201ENST00000521474 169 ntBASIC3.57□□□□□ -1.84
CTNND1O60716 AC104027.1-201ENST00000521887 300 ntBASIC3.57□□□□□ -1.84
CTNND1O60716 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.57□□□□□ -1.84
CTNND1O60716 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.57□□□□□ -1.84
CTNND1O60716 AC103988.1-201ENST00000566382 2177 ntBASIC3.57□□□□□ -1.84
CTNND1O60716 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.57□□□□□ -1.84
CTNND1O60716 UBE2V2P2-201ENST00000587677 504 ntBASIC3.57□□□□□ -1.84
CTNND1O60716 RNU6-85P-201ENST00000605989 107 ntBASIC3.57□□□□□ -1.84
CTNND1O60716 ZNF826P-207ENST00000622273 1910 ntBASIC3.57□□□□□ -1.84
CTNND1O60716 Z69720.2-201ENST00000624755 279 ntBASIC3.57□□□□□ -1.84
CTNND1O60716 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CTNND1O60716 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CTNND1O60716 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
CTNND1O60716 CDC27P3-201ENST00000635418 1910 ntBASIC3.56□□□□□ -1.84
CTNND1O60716 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CTNND1O60716 RNA5SP383-201ENST00000362934 120 ntBASIC3.56□□□□□ -1.84
CTNND1O60716 RNU6-1252P-201ENST00000363054 104 ntBASIC3.56□□□□□ -1.84
CTNND1O60716 RNU6-1013P-201ENST00000384180 107 ntBASIC3.56□□□□□ -1.84
CTNND1O60716 RN7SKP32-201ENST00000410167 303 ntBASIC3.56□□□□□ -1.84
CTNND1O60716 MTND3P8-201ENST00000412909 339 ntBASIC3.56□□□□□ -1.84
CTNND1O60716 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CTNND1O60716 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.56□□□□□ -1.84
CTNND1O60716 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.56□□□□□ -1.84
CTNND1O60716 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.56□□□□□ -1.84
CTNND1O60716 RNU6-329P-201ENST00000459618 107 ntBASIC3.56□□□□□ -1.84
CTNND1O60716 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CTNND1O60716 RNU6-864P-201ENST00000516256 108 ntBASIC3.56□□□□□ -1.84
CTNND1O60716 Y_RNA.702-201ENST00000516843 96 ntBASIC3.56□□□□□ -1.84
CTNND1O60716 AC022634.1-201ENST00000520765 532 ntBASIC3.56□□□□□ -1.84
CTNND1O60716 AC068657.1-201ENST00000520807 306 ntBASIC3.56□□□□□ -1.84
CTNND1O60716 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.56□□□□□ -1.84
CTNND1O60716 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.56□□□□□ -1.84
CTNND1O60716 DNAJC8P1-201ENST00000554535 372 ntBASIC3.56□□□□□ -1.84
CTNND1O60716 MIR3162-201ENST00000581818 82 ntBASIC3.56□□□□□ -1.84
CTNND1O60716 AC021646.1-201ENST00000605469 484 ntBASIC3.56□□□□□ -1.84
CTNND1O60716 AL355073.2-201ENST00000612106 557 ntBASIC3.56□□□□□ -1.84
CTNND1O60716 SCARNA4-202ENST00000625402 129 ntBASIC3.56□□□□□ -1.84
CTNND1O60716 AC073476.4-201ENST00000628409 72 ntBASIC3.56□□□□□ -1.84
CTNND1O60716 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CTNND1O60716 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.56□□□□□ -1.84
CTNND1O60716 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CTNND1O60716 RNU6-37P-201ENST00000362692 107 ntBASIC3.55□□□□□ -1.84
CTNND1O60716 SNORD56.3-201ENST00000363507 71 ntBASIC3.55□□□□□ -1.84
CTNND1O60716 RNU6-799P-201ENST00000363567 107 ntBASIC3.55□□□□□ -1.84
CTNND1O60716 RNU6-11P-201ENST00000364234 107 ntBASIC3.55□□□□□ -1.84
CTNND1O60716 RNU6-25P-201ENST00000383873 107 ntBASIC3.55□□□□□ -1.84
CTNND1O60716 RNU6-1-201ENST00000383898 107 ntBASIC3.55□□□□□ -1.84
CTNND1O60716 RNU6-48P-201ENST00000384161 107 ntBASIC3.55□□□□□ -1.84
CTNND1O60716 RNU6-36P-201ENST00000384172 107 ntBASIC3.55□□□□□ -1.84
CTNND1O60716 RNU6-4P-201ENST00000384205 107 ntBASIC3.55□□□□□ -1.84
CTNND1O60716 RNU6-5P-201ENST00000384238 107 ntBASIC3.55□□□□□ -1.84
CTNND1O60716 RNU6-3P-201ENST00000384314 107 ntBASIC3.55□□□□□ -1.84
CTNND1O60716 RNU6-16P-201ENST00000384385 107 ntBASIC3.55□□□□□ -1.84
CTNND1O60716 RNU6-15P-201ENST00000384534 107 ntBASIC3.55□□□□□ -1.84
CTNND1O60716 RNU6-2-201ENST00000384627 107 ntBASIC3.55□□□□□ -1.84
CTNND1O60716 RNU6-29P-201ENST00000384637 107 ntBASIC3.55□□□□□ -1.84
CTNND1O60716 RNU6-9-201ENST00000384776 107 ntBASIC3.55□□□□□ -1.84
CTNND1O60716 RNU6-33P-201ENST00000384793 107 ntBASIC3.55□□□□□ -1.84
CTNND1O60716 EI24P2-201ENST00000397776 1076 ntBASIC3.55□□□□□ -1.84
CTNND1O60716 NDUFB4P5-201ENST00000415445 361 ntBASIC3.55□□□□□ -1.84
CTNND1O60716 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.55□□□□□ -1.84
CTNND1O60716 RPL21P40-201ENST00000428586 483 ntBASIC3.55□□□□□ -1.84
CTNND1O60716 MTND4LP16-201ENST00000440828 295 ntBASIC3.55□□□□□ -1.84
CTNND1O60716 HIGD1AP2-201ENST00000446367 280 ntBASIC3.55□□□□□ -1.84
CTNND1O60716 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.55□□□□□ -1.84
CTNND1O60716 NIPA2P5-201ENST00000452282 464 ntBASIC3.55□□□□□ -1.84
CTNND1O60716 AC104472.2-201ENST00000469035 601 ntBASIC3.55□□□□□ -1.84
CTNND1O60716 MTND4LP22-201ENST00000508209 276 ntBASIC3.55□□□□□ -1.84
CTNND1O60716 Y_RNA.687-201ENST00000516558 91 ntBASIC3.55□□□□□ -1.84
CTNND1O60716 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CTNND1O60716 AC006199.1-201ENST00000548728 219 ntBASIC3.55□□□□□ -1.84
CTNND1O60716 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.55□□□□□ -1.84
CTNND1O60716 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.55□□□□□ -1.84
CTNND1O60716 OR1M4P-201ENST00000589199 287 ntBASIC3.55□□□□□ -1.84
CTNND1O60716 RNU6-6P-201ENST00000606623 107 ntBASIC3.55□□□□□ -1.84
CTNND1O60716 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms