Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 CBX3P1-201ENST00000325243 554 ntBASIC3.14□□□□□ -1.91
CCNT1O60563 MIR412-201ENST00000362142 91 ntBASIC3.14□□□□□ -1.91
CCNT1O60563 MIR26A1-201ENST00000362205 77 ntBASIC3.14□□□□□ -1.91
CCNT1O60563 RNU6-82P-201ENST00000363970 107 ntBASIC3.14□□□□□ -1.91
CCNT1O60563 U8.9-201ENST00000365667 134 ntBASIC3.14□□□□□ -1.91
CCNT1O60563 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.14□□□□□ -1.91
CCNT1O60563 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.14□□□□□ -1.91
CCNT1O60563 AC025750.2-201ENST00000442609 450 ntBASIC3.14□□□□□ -1.91
CCNT1O60563 BRK1P2-201ENST00000442875 223 ntBASIC3.14□□□□□ -1.91
CCNT1O60563 MTND3P10-201ENST00000450967 341 ntBASIC3.14□□□□□ -1.91
CCNT1O60563 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.14□□□□□ -1.91
CCNT1O60563 snoU109.2-201ENST00000459316 135 ntBASIC3.14□□□□□ -1.91
CCNT1O60563 AP000852.1-201ENST00000472460 573 ntBASIC3.14□□□□□ -1.91
CCNT1O60563 AC011005.2-201ENST00000487324 359 ntBASIC3.14□□□□□ -1.91
CCNT1O60563 HMGN1P12-201ENST00000499125 195 ntBASIC3.14□□□□□ -1.91
CCNT1O60563 AC008628.2-201ENST00000502605 298 ntBASIC3.14□□□□□ -1.91
CCNT1O60563 AC097462.2-201ENST00000504623 481 ntBASIC3.14□□□□□ -1.91
CCNT1O60563 SNORA19.2-201ENST00000516013 114 ntBASIC3.14□□□□□ -1.91
CCNT1O60563 SNORA14.1-201ENST00000516113 141 ntBASIC3.14□□□□□ -1.91
CCNT1O60563 MIR892C-201ENST00000516410 77 ntBASIC3.14□□□□□ -1.91
CCNT1O60563 RNU6-273P-201ENST00000516937 96 ntBASIC3.14□□□□□ -1.91
CCNT1O60563 SNORA25.17-201ENST00000517184 124 ntBASIC3.14□□□□□ -1.91
CCNT1O60563 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCNT1O60563 AC079600.2-201ENST00000550076 130 ntBASIC3.14□□□□□ -1.91
CCNT1O60563 AC010653.1-201ENST00000571108 881 ntBASIC3.14□□□□□ -1.91
CCNT1O60563 LARP7P3-201ENST00000579888 337 ntBASIC3.14□□□□□ -1.91
CCNT1O60563 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.14□□□□□ -1.91
CCNT1O60563 MIR3942-201ENST00000585264 109 ntBASIC3.14□□□□□ -1.91
CCNT1O60563 AC011712.1-201ENST00000588959 234 ntBASIC3.14□□□□□ -1.91
CCNT1O60563 AL033523.1-201ENST00000605153 153 ntBASIC3.14□□□□□ -1.91
CCNT1O60563 AL160281.1-201ENST00000605307 311 ntBASIC3.14□□□□□ -1.91
CCNT1O60563 AC123912.5-201ENST00000605470 343 ntBASIC3.14□□□□□ -1.91
CCNT1O60563 AP003122.6-201ENST00000623831 495 ntBASIC3.14□□□□□ -1.91
CCNT1O60563 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.14□□□□□ -1.91
CCNT1O60563 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCNT1O60563 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCNT1O60563 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.13□□□□□ -1.91
CCNT1O60563 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CCNT1O60563 AC138393.1-203ENST00000327086 343 ntBASIC3.13□□□□□ -1.91
CCNT1O60563 RNU1-112P-201ENST00000364401 164 ntBASIC3.13□□□□□ -1.91
CCNT1O60563 RNU6-867P-201ENST00000364956 107 ntBASIC3.13□□□□□ -1.91
CCNT1O60563 RNU6-831P-201ENST00000384548 107 ntBASIC3.13□□□□□ -1.91
CCNT1O60563 MIR181B1-201ENST00000385240 110 ntBASIC3.13□□□□□ -1.91
CCNT1O60563 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCNT1O60563 RPL26P27-201ENST00000414397 437 ntBASIC3.13□□□□□ -1.91
CCNT1O60563 BMS1P22-201ENST00000414726 313 ntBASIC3.13□□□□□ -1.91
CCNT1O60563 AC016831.2-201ENST00000417179 352 ntBASIC3.13□□□□□ -1.91
CCNT1O60563 AC009161.1-201ENST00000417306 376 ntBASIC3.13□□□□□ -1.91
CCNT1O60563 ARL5AP1-201ENST00000418991 388 ntBASIC3.13□□□□□ -1.91
CCNT1O60563 AC098614.3-201ENST00000438957 440 ntBASIC3.13□□□□□ -1.91
CCNT1O60563 USP9YP8-201ENST00000441913 500 ntBASIC3.13□□□□□ -1.91
CCNT1O60563 RPL7P12-201ENST00000446719 750 ntBASIC3.13□□□□□ -1.91
CCNT1O60563 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.13□□□□□ -1.91
CCNT1O60563 RPL7P43-201ENST00000478876 753 ntBASIC3.13□□□□□ -1.91
CCNT1O60563 SNORA31.1-201ENST00000515993 133 ntBASIC3.13□□□□□ -1.91
CCNT1O60563 RNU4-49P-201ENST00000516080 140 ntBASIC3.13□□□□□ -1.91
CCNT1O60563 SNORA31.5-201ENST00000516190 133 ntBASIC3.13□□□□□ -1.91
CCNT1O60563 AC090136.1-201ENST00000520009 240 ntBASIC3.13□□□□□ -1.91
CCNT1O60563 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCNT1O60563 PSMA3P-201ENST00000555485 635 ntBASIC3.13□□□□□ -1.91
CCNT1O60563 AL627309.6-201ENST00000606857 840 ntBASIC3.13□□□□□ -1.91
CCNT1O60563 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.13□□□□□ -1.91
CCNT1O60563 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.13□□□□□ -1.91
CCNT1O60563 AL161431.1-201ENST00000618966 4205 ntBASIC3.13□□□□□ -1.91
CCNT1O60563 AC093010.3-201ENST00000570269 15214 ntBASIC3.13□□□□□ -1.91
CCNT1O60563 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCNT1O60563 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
CCNT1O60563 AC121333.1-201ENST00000567488 2709 ntBASIC3.12□□□□□ -1.91
CCNT1O60563 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCNT1O60563 Y_RNA.70-201ENST00000362886 110 ntBASIC3.12□□□□□ -1.91
CCNT1O60563 Y_RNA.72-201ENST00000362894 103 ntBASIC3.12□□□□□ -1.91
CCNT1O60563 RNU6-898P-201ENST00000365627 104 ntBASIC3.12□□□□□ -1.91
CCNT1O60563 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CCNT1O60563 SNORA26.7-201ENST00000391288 122 ntBASIC3.12□□□□□ -1.91
CCNT1O60563 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.12□□□□□ -1.91
CCNT1O60563 AL138827.1-201ENST00000402666 306 ntBASIC3.12□□□□□ -1.91
CCNT1O60563 AC093151.1-201ENST00000427711 313 ntBASIC3.12□□□□□ -1.91
CCNT1O60563 AC104332.2-201ENST00000429959 156 ntBASIC3.12□□□□□ -1.91
CCNT1O60563 AC105272.1-201ENST00000438604 198 ntBASIC3.12□□□□□ -1.91
CCNT1O60563 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.12□□□□□ -1.91
CCNT1O60563 AL714022.1-201ENST00000439897 151 ntBASIC3.12□□□□□ -1.91
CCNT1O60563 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.12□□□□□ -1.91
CCNT1O60563 HMGB1P30-201ENST00000492455 606 ntBASIC3.12□□□□□ -1.91
CCNT1O60563 AC091951.2-201ENST00000500762 203 ntBASIC3.12□□□□□ -1.91
CCNT1O60563 SNORA9.3-201ENST00000516383 129 ntBASIC3.12□□□□□ -1.91
CCNT1O60563 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.12□□□□□ -1.91
CCNT1O60563 AC243972.3-201ENST00000539655 198 ntBASIC3.12□□□□□ -1.91
CCNT1O60563 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.12□□□□□ -1.91
CCNT1O60563 MIR4782-201ENST00000577987 79 ntBASIC3.12□□□□□ -1.91
CCNT1O60563 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCNT1O60563 MIR3605-201ENST00000583214 100 ntBASIC3.12□□□□□ -1.91
CCNT1O60563 MIR5692C1-201ENST00000585309 91 ntBASIC3.12□□□□□ -1.91
CCNT1O60563 NUTF2P8-201ENST00000604593 363 ntBASIC3.12□□□□□ -1.91
CCNT1O60563 AC009994.1-201ENST00000606889 253 ntBASIC3.12□□□□□ -1.91
CCNT1O60563 AL357078.3-201ENST00000607528 618 ntBASIC3.12□□□□□ -1.91
CCNT1O60563 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCNT1O60563 AC093913.1-201ENST00000614178 329 ntBASIC3.12□□□□□ -1.91
CCNT1O60563 AL138880.2-201ENST00000616214 239 ntBASIC3.12□□□□□ -1.91
CCNT1O60563 RMST_4.1-201ENST00000616886 107 ntBASIC3.12□□□□□ -1.91
CCNT1O60563 AL133216.2-202ENST00000634512 349 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms