Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 RPL21P99-201ENST00000480369 423 ntBASIC2.69□□□□□ -1.98
TO15178 AC092989.1-201ENST00000481235 277 ntBASIC2.69□□□□□ -1.98
TO15178 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
TO15178 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
TO15178 AC116655.1-201ENST00000508324 901 ntBASIC2.69□□□□□ -1.98
TO15178 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.69□□□□□ -1.98
TO15178 SNORA74D-201ENST00000516404 141 ntBASIC2.69□□□□□ -1.98
TO15178 RNU6-826P-201ENST00000516827 104 ntBASIC2.69□□□□□ -1.98
TO15178 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.69□□□□□ -1.98
TO15178 AC005261.5-201ENST00000596280 355 ntBASIC2.69□□□□□ -1.98
TO15178 AC026585.1-201ENST00000619582 524 ntBASIC2.69□□□□□ -1.98
TO15178 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.69□□□□□ -1.98
TO15178 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
TO15178 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.69□□□□□ -1.98
TO15178 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.68□□□□□ -1.98
TO15178 OR4G1P-203ENST00000641984 1631 ntBASIC2.68□□□□□ -1.98
TO15178 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
TO15178 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
TO15178 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.68□□□□□ -1.98
TO15178 RNU6-451P-201ENST00000362921 107 ntBASIC2.68□□□□□ -1.98
TO15178 Y_RNA.295-201ENST00000364918 102 ntBASIC2.68□□□□□ -1.98
TO15178 SNORA44-201ENST00000384584 132 ntBASIC2.68□□□□□ -1.98
TO15178 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.68□□□□□ -1.98
TO15178 AL513475.1-201ENST00000406602 315 ntBASIC2.68□□□□□ -1.98
TO15178 MIR1277-201ENST00000408536 78 ntBASIC2.68□□□□□ -1.98
TO15178 CYCSP33-201ENST00000414485 327 ntBASIC2.68□□□□□ -1.98
TO15178 AC016831.2-201ENST00000417179 352 ntBASIC2.68□□□□□ -1.98
TO15178 PGBD4P6-201ENST00000421501 610 ntBASIC2.68□□□□□ -1.98
TO15178 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.68□□□□□ -1.98
TO15178 AL139132.1-201ENST00000431587 344 ntBASIC2.68□□□□□ -1.98
TO15178 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.68□□□□□ -1.98
TO15178 CALM1P1-201ENST00000442082 433 ntBASIC2.68□□□□□ -1.98
TO15178 AC008571.1-201ENST00000467232 300 ntBASIC2.68□□□□□ -1.98
TO15178 RPS27AP9-201ENST00000477681 438 ntBASIC2.68□□□□□ -1.98
TO15178 CCDC34P1-201ENST00000507441 517 ntBASIC2.68□□□□□ -1.98
TO15178 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.68□□□□□ -1.98
TO15178 RNU6-581P-201ENST00000516214 105 ntBASIC2.68□□□□□ -1.98
TO15178 CENPUP1-201ENST00000526649 1202 ntBASIC2.68□□□□□ -1.98
TO15178 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.68□□□□□ -1.98
TO15178 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.68□□□□□ -1.98
TO15178 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.68□□□□□ -1.98
TO15178 AC107304.1-201ENST00000604229 296 ntBASIC2.68□□□□□ -1.98
TO15178 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.68□□□□□ -1.98
TO15178 AC007014.2-201ENST00000615581 479 ntBASIC2.68□□□□□ -1.98
TO15178 ATP5A1P2-202ENST00000616464 443 ntBASIC2.68□□□□□ -1.98
TO15178 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.68□□□□□ -1.98
TO15178 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.68□□□□□ -1.98
TO15178 SCARNA4-202ENST00000625402 129 ntBASIC2.68□□□□□ -1.98
TO15178 MIR7515-201ENST00000637837 67 ntBASIC2.68□□□□□ -1.98
TO15178 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.68□□□□□ -1.98
TO15178 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
TO15178 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
TO15178 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
TO15178 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
TO15178 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.67□□□□□ -1.98
TO15178 Y_RNA.231-201ENST00000364358 102 ntBASIC2.67□□□□□ -1.98
TO15178 RNU6-534P-201ENST00000364877 106 ntBASIC2.67□□□□□ -1.98
TO15178 Y_RNA.324-201ENST00000365165 102 ntBASIC2.67□□□□□ -1.98
TO15178 RNU4-20P-201ENST00000365601 151 ntBASIC2.67□□□□□ -1.98
TO15178 RNU6-72P-201ENST00000384285 79 ntBASIC2.67□□□□□ -1.98
TO15178 RNU6-19P-201ENST00000384718 107 ntBASIC2.67□□□□□ -1.98
TO15178 MIR514A2-201ENST00000385131 88 ntBASIC2.67□□□□□ -1.98
TO15178 MIR514A3-201ENST00000385132 88 ntBASIC2.67□□□□□ -1.98
TO15178 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
TO15178 HMGN2P35-201ENST00000412164 270 ntBASIC2.67□□□□□ -1.98
TO15178 OR9R1P-201ENST00000412200 877 ntBASIC2.67□□□□□ -1.98
TO15178 AC022018.1-201ENST00000430685 241 ntBASIC2.67□□□□□ -1.98
TO15178 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.67□□□□□ -1.98
TO15178 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.67□□□□□ -1.98
TO15178 OSTCP8-201ENST00000445117 448 ntBASIC2.67□□□□□ -1.98
TO15178 HIGD1AP2-201ENST00000446367 280 ntBASIC2.67□□□□□ -1.98
TO15178 AC006026.2-201ENST00000457376 180 ntBASIC2.67□□□□□ -1.98
TO15178 snoU109.2-201ENST00000459316 135 ntBASIC2.67□□□□□ -1.98
TO15178 DYNLL1P5-201ENST00000467158 270 ntBASIC2.67□□□□□ -1.98
TO15178 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.67□□□□□ -1.98
TO15178 SCGB1D5P-201ENST00000515134 247 ntBASIC2.67□□□□□ -1.98
TO15178 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.67□□□□□ -1.98
TO15178 SCARNA13-201ENST00000516672 275 ntBASIC2.67□□□□□ -1.98
TO15178 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.67□□□□□ -1.98
TO15178 AC022080.3-201ENST00000544433 482 ntBASIC2.67□□□□□ -1.98
TO15178 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.67□□□□□ -1.98
TO15178 OR11H5P-201ENST00000554039 926 ntBASIC2.67□□□□□ -1.98
TO15178 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.67□□□□□ -1.98
TO15178 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.67□□□□□ -1.98
TO15178 AC010525.2-201ENST00000590920 195 ntBASIC2.67□□□□□ -1.98
TO15178 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.67□□□□□ -1.98
TO15178 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.67□□□□□ -1.98
TO15178 AC090115.4-201ENST00000609970 188 ntBASIC2.67□□□□□ -1.98
TO15178 AL160394.1-201ENST00000624765 724 ntBASIC2.67□□□□□ -1.98
TO15178 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.67□□□□□ -1.98
TO15178 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
TO15178 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.67□□□□□ -1.98
TO15178 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.66□□□□□ -1.98
TO15178 MAPK10-266ENST00000641066 6555 ntBASIC2.66□□□□□ -1.98
TO15178 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
TO15178 RNU1-35P-201ENST00000362782 153 ntBASIC2.66□□□□□ -1.98
TO15178 RNU6-1303P-201ENST00000364841 107 ntBASIC2.66□□□□□ -1.98
TO15178 RNU1-100P-201ENST00000365255 165 ntBASIC2.66□□□□□ -1.98
TO15178 MIR483-201ENST00000385070 76 ntBASIC2.66□□□□□ -1.98
TO15178 SNORA48.2-201ENST00000390926 124 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms