Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 AC006028.1-201ENST00000438379 402 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 AL161651.1-201ENST00000440882 223 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.18□□□□□ -1.9
PCDH17O14917 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.18□□□□□ -1.9
PCDH17O14917 AC092001.1-201ENST00000453012 261 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 snoU109.2-201ENST00000459316 135 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 CENPBD1P1-201ENST00000464061 469 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDH17O14917 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDH17O14917 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.18□□□□□ -1.9
PCDH17O14917 COPS8P3-201ENST00000526024 482 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 AC026371.1-201ENST00000551867 419 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDH17O14917 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDH17O14917 AC026464.5-201ENST00000562497 722 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 MIR4276-201ENST00000584832 70 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 MIR3942-201ENST00000585264 109 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 AC012493.2-201ENST00000595083 291 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 AC123912.5-201ENST00000605470 343 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 RNU6-6P-201ENST00000606623 107 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 AL138726.1-201ENST00000614873 333 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDH17O14917 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.18□□□□□ -1.9
PCDH17O14917 GABRG2-229ENST00000641017 3628 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 MAPK10-322ENST00000641485 4530 ntBASIC3.18□□□□□ -1.9
PCDH17O14917 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.17□□□□□ -1.9
PCDH17O14917 AC138393.1-203ENST00000327086 343 ntBASIC3.17□□□□□ -1.9
PCDH17O14917 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PCDH17O14917 RNU6-562P-201ENST00000362731 107 ntBASIC3.17□□□□□ -1.9
PCDH17O14917 RNU6-78P-201ENST00000362897 107 ntBASIC3.17□□□□□ -1.9
PCDH17O14917 Y_RNA.135-201ENST00000363439 95 ntBASIC3.17□□□□□ -1.9
PCDH17O14917 Y_RNA.142-201ENST00000363491 102 ntBASIC3.17□□□□□ -1.9
PCDH17O14917 SNORD81.2-201ENST00000365153 76 ntBASIC3.17□□□□□ -1.9
PCDH17O14917 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDH17O14917 MIR128-1-201ENST00000384921 82 ntBASIC3.17□□□□□ -1.9
PCDH17O14917 MT-TD-201ENST00000387419 68 ntBASIC3.17□□□□□ -1.9
PCDH17O14917 RNU2-49P-201ENST00000410666 184 ntBASIC3.17□□□□□ -1.9
PCDH17O14917 SNORD56-201ENST00000413522 71 ntBASIC3.17□□□□□ -1.9
PCDH17O14917 AL365496.1-201ENST00000426885 215 ntBASIC3.17□□□□□ -1.9
PCDH17O14917 AL031274.1-201ENST00000450334 232 ntBASIC3.17□□□□□ -1.9
PCDH17O14917 HMGN1P18-201ENST00000457642 277 ntBASIC3.17□□□□□ -1.9
PCDH17O14917 RPL23AP45-201ENST00000476406 468 ntBASIC3.17□□□□□ -1.9
PCDH17O14917 RPL7P43-201ENST00000478876 753 ntBASIC3.17□□□□□ -1.9
PCDH17O14917 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.17□□□□□ -1.9
PCDH17O14917 AC008526.1-201ENST00000509149 338 ntBASIC3.17□□□□□ -1.9
PCDH17O14917 RPL39P5-202ENST00000512505 151 ntBASIC3.17□□□□□ -1.9
PCDH17O14917 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.17□□□□□ -1.9
PCDH17O14917 RNU6-273P-201ENST00000516937 96 ntBASIC3.17□□□□□ -1.9
PCDH17O14917 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.17□□□□□ -1.9
PCDH17O14917 AC091135.1-201ENST00000585943 307 ntBASIC3.17□□□□□ -1.9
PCDH17O14917 MIR7112-201ENST00000616126 65 ntBASIC3.17□□□□□ -1.9
PCDH17O14917 TPTEP1-208ENST00000636884 213 ntBASIC3.17□□□□□ -1.9
PCDH17O14917 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDH17O14917 AC091564.4-201ENST00000533934 2194 ntBASIC3.17□□□□□ -1.9
PCDH17O14917 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PCDH17O14917 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.16□□□□□ -1.9
PCDH17O14917 Y_RNA.70-201ENST00000362886 110 ntBASIC3.16□□□□□ -1.9
PCDH17O14917 Y_RNA.263-201ENST00000364659 114 ntBASIC3.16□□□□□ -1.9
PCDH17O14917 RNU6-1329P-201ENST00000365664 107 ntBASIC3.16□□□□□ -1.9
PCDH17O14917 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCDH17O14917 RNU6-750P-201ENST00000390946 107 ntBASIC3.16□□□□□ -1.9
PCDH17O14917 AL360182.1-201ENST00000397433 468 ntBASIC3.16□□□□□ -1.9
PCDH17O14917 RNU6-293P-201ENST00000411259 106 ntBASIC3.16□□□□□ -1.9
PCDH17O14917 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDH17O14917 AL353678.1-201ENST00000422735 741 ntBASIC3.16□□□□□ -1.9
PCDH17O14917 AC093151.1-201ENST00000427711 313 ntBASIC3.16□□□□□ -1.9
PCDH17O14917 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDH17O14917 RPS15AP10-201ENST00000432472 382 ntBASIC3.16□□□□□ -1.9
PCDH17O14917 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDH17O14917 RPL23AP22-201ENST00000437556 453 ntBASIC3.16□□□□□ -1.9
PCDH17O14917 RPL32P28-201ENST00000443577 397 ntBASIC3.16□□□□□ -1.9
PCDH17O14917 AC124916.1-201ENST00000444020 547 ntBASIC3.16□□□□□ -1.9
PCDH17O14917 MRPL50P4-201ENST00000446432 475 ntBASIC3.16□□□□□ -1.9
PCDH17O14917 AL441985.1-201ENST00000457727 251 ntBASIC3.16□□□□□ -1.9
PCDH17O14917 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDH17O14917 AC104472.2-201ENST00000469035 601 ntBASIC3.16□□□□□ -1.9
PCDH17O14917 AC103851.1-201ENST00000506833 274 ntBASIC3.16□□□□□ -1.9
PCDH17O14917 AC116655.1-201ENST00000508324 901 ntBASIC3.16□□□□□ -1.9
PCDH17O14917 AC096745.1-201ENST00000509945 370 ntBASIC3.16□□□□□ -1.9
PCDH17O14917 RN7SKP282-201ENST00000516824 299 ntBASIC3.16□□□□□ -1.9
PCDH17O14917 AC107934.2-201ENST00000518653 310 ntBASIC3.16□□□□□ -1.9
PCDH17O14917 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDH17O14917 AC104027.1-201ENST00000521887 300 ntBASIC3.16□□□□□ -1.9
PCDH17O14917 AP005597.4-201ENST00000526762 229 ntBASIC3.16□□□□□ -1.9
PCDH17O14917 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDH17O14917 AC010186.2-204ENST00000537668 439 ntBASIC3.16□□□□□ -1.9
PCDH17O14917 AC138761.3-201ENST00000579993 334 ntBASIC3.16□□□□□ -1.9
PCDH17O14917 MIR3672-201ENST00000584290 82 ntBASIC3.16□□□□□ -1.9
PCDH17O14917 AC243960.4-201ENST00000600532 288 ntBASIC3.16□□□□□ -1.9
PCDH17O14917 AC024153.1-201ENST00000603103 365 ntBASIC3.16□□□□□ -1.9
PCDH17O14917 AL355877.2-201ENST00000603670 358 ntBASIC3.16□□□□□ -1.9
PCDH17O14917 AC009994.1-201ENST00000606889 253 ntBASIC3.16□□□□□ -1.9
PCDH17O14917 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.16□□□□□ -1.9
PCDH17O14917 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.16□□□□□ -1.9
PCDH17O14917 AC005858.4-201ENST00000623191 700 ntBASIC3.16□□□□□ -1.9
PCDH17O14917 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCDH17O14917 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PCDH17O14917 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCDH17O14917 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCDH17O14917 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms