Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AC009296.1-201ENST00000443146 155 ntBASIC2.3□□□□□ -2.04
CDX4O14627 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.3□□□□□ -2.04
CDX4O14627 FABP5P15-201ENST00000453566 214 ntBASIC2.3□□□□□ -2.04
CDX4O14627 RPL23AP42-201ENST00000471152 471 ntBASIC2.3□□□□□ -2.04
CDX4O14627 RPL23AP70-201ENST00000483361 460 ntBASIC2.3□□□□□ -2.04
CDX4O14627 RPS15AP34-201ENST00000487776 387 ntBASIC2.3□□□□□ -2.04
CDX4O14627 RPS27P26-201ENST00000494583 239 ntBASIC2.3□□□□□ -2.04
CDX4O14627 AC026801.1-201ENST00000497178 464 ntBASIC2.3□□□□□ -2.04
CDX4O14627 AC116353.2-201ENST00000505332 712 ntBASIC2.3□□□□□ -2.04
CDX4O14627 AC114786.4-201ENST00000508771 728 ntBASIC2.3□□□□□ -2.04
CDX4O14627 RNU6-1178P-201ENST00000516674 107 ntBASIC2.3□□□□□ -2.04
CDX4O14627 RNA5SP471-201ENST00000516971 106 ntBASIC2.3□□□□□ -2.04
CDX4O14627 RNU6-410P-201ENST00000517006 107 ntBASIC2.3□□□□□ -2.04
CDX4O14627 RNA5SP165-201ENST00000517142 115 ntBASIC2.3□□□□□ -2.04
CDX4O14627 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.3□□□□□ -2.04
CDX4O14627 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.3□□□□□ -2.04
CDX4O14627 MTND1P35-201ENST00000526739 508 ntBASIC2.3□□□□□ -2.04
CDX4O14627 AP003034.1-201ENST00000534621 422 ntBASIC2.3□□□□□ -2.04
CDX4O14627 NACAP3-201ENST00000552100 481 ntBASIC2.3□□□□□ -2.04
CDX4O14627 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.3□□□□□ -2.04
CDX4O14627 AL391261.3-201ENST00000557194 520 ntBASIC2.3□□□□□ -2.04
CDX4O14627 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.3□□□□□ -2.04
CDX4O14627 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.3□□□□□ -2.04
CDX4O14627 AC016727.1-205ENST00000605437 569 ntBASIC2.3□□□□□ -2.04
CDX4O14627 AL121992.2-201ENST00000606262 256 ntBASIC2.3□□□□□ -2.04
CDX4O14627 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CDX4O14627 DUSP12P1-201ENST00000612874 516 ntBASIC2.3□□□□□ -2.04
CDX4O14627 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.3□□□□□ -2.04
CDX4O14627 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.3□□□□□ -2.04
CDX4O14627 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.3□□□□□ -2.04
CDX4O14627 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.3□□□□□ -2.04
CDX4O14627 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CDX4O14627 AC138915.1-201ENST00000565427 1685 ntBASIC2.3□□□□□ -2.04
CDX4O14627 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CDX4O14627 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.3□□□□□ -2.04
CDX4O14627 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.3□□□□□ -2.04
CDX4O14627 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CDX4O14627 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
CDX4O14627 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.3□□□□□ -2.04
CDX4O14627 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CDX4O14627 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.29□□□□□ -2.04
CDX4O14627 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CDX4O14627 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
CDX4O14627 AC002543.1-201ENST00000299783 1954 ntBASIC2.29□□□□□ -2.04
CDX4O14627 AC080128.1-201ENST00000474389 1917 ntBASIC2.29□□□□□ -2.04
CDX4O14627 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
CDX4O14627 ZNF680P1-201ENST00000436625 1469 ntBASIC2.29□□□□□ -2.04
CDX4O14627 Y_RNA.38-201ENST00000362617 102 ntBASIC2.29□□□□□ -2.04
CDX4O14627 RNU6-1120P-201ENST00000362988 108 ntBASIC2.29□□□□□ -2.04
CDX4O14627 Y_RNA.89-201ENST00000363031 102 ntBASIC2.29□□□□□ -2.04
CDX4O14627 RNU6-1097P-201ENST00000363586 107 ntBASIC2.29□□□□□ -2.04
CDX4O14627 RNU6-288P-201ENST00000363690 104 ntBASIC2.29□□□□□ -2.04
CDX4O14627 RNU6-884P-201ENST00000363889 107 ntBASIC2.29□□□□□ -2.04
CDX4O14627 RNU6-188P-201ENST00000364207 107 ntBASIC2.29□□□□□ -2.04
CDX4O14627 Y_RNA.295-201ENST00000364918 102 ntBASIC2.29□□□□□ -2.04
CDX4O14627 Y_RNA.338-201ENST00000365320 114 ntBASIC2.29□□□□□ -2.04
CDX4O14627 SNORA64-201ENST00000384674 134 ntBASIC2.29□□□□□ -2.04
CDX4O14627 MIR767-201ENST00000390228 109 ntBASIC2.29□□□□□ -2.04
CDX4O14627 AL591416.1-201ENST00000404015 867 ntBASIC2.29□□□□□ -2.04
CDX4O14627 RPL26P27-201ENST00000414397 437 ntBASIC2.29□□□□□ -2.04
CDX4O14627 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.29□□□□□ -2.04
CDX4O14627 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.29□□□□□ -2.04
CDX4O14627 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CDX4O14627 AC000111.3-201ENST00000433478 193 ntBASIC2.29□□□□□ -2.04
CDX4O14627 AL606489.2-201ENST00000433886 234 ntBASIC2.29□□□□□ -2.04
CDX4O14627 CECR9-201ENST00000453421 199 ntBASIC2.29□□□□□ -2.04
CDX4O14627 AC022364.2-201ENST00000457963 554 ntBASIC2.29□□□□□ -2.04
CDX4O14627 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.29□□□□□ -2.04
CDX4O14627 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.29□□□□□ -2.04
CDX4O14627 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.29□□□□□ -2.04
CDX4O14627 SUB1P1-201ENST00000524415 382 ntBASIC2.29□□□□□ -2.04
CDX4O14627 AP003072.2-201ENST00000527756 676 ntBASIC2.29□□□□□ -2.04
CDX4O14627 AC104383.1-201ENST00000530297 370 ntBASIC2.29□□□□□ -2.04
CDX4O14627 AL157687.1-201ENST00000554853 619 ntBASIC2.29□□□□□ -2.04
CDX4O14627 AP001330.5-201ENST00000607176 411 ntBASIC2.29□□□□□ -2.04
CDX4O14627 AC008536.2-201ENST00000607284 349 ntBASIC2.29□□□□□ -2.04
CDX4O14627 AC104458.1-201ENST00000608243 463 ntBASIC2.29□□□□□ -2.04
CDX4O14627 AC093788.1-201ENST00000609356 927 ntBASIC2.29□□□□□ -2.04
CDX4O14627 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.29□□□□□ -2.04
CDX4O14627 AC009318.2-201ENST00000610917 651 ntBASIC2.29□□□□□ -2.04
CDX4O14627 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CDX4O14627 AL359547.2-201ENST00000615810 418 ntBASIC2.29□□□□□ -2.04
CDX4O14627 MIR1321-201ENST00000637766 79 ntBASIC2.29□□□□□ -2.04
CDX4O14627 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CDX4O14627 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CDX4O14627 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
CDX4O14627 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CDX4O14627 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.28□□□□□ -2.04
CDX4O14627 RNU6-1180P-201ENST00000364935 107 ntBASIC2.28□□□□□ -2.04
CDX4O14627 RNY3P14-201ENST00000384309 102 ntBASIC2.28□□□□□ -2.04
CDX4O14627 RNU6-14P-201ENST00000384630 106 ntBASIC2.28□□□□□ -2.04
CDX4O14627 RNU6-1158P-201ENST00000391167 107 ntBASIC2.28□□□□□ -2.04
CDX4O14627 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.28□□□□□ -2.04
CDX4O14627 RN7SKP32-201ENST00000410167 303 ntBASIC2.28□□□□□ -2.04
CDX4O14627 Y_RNA.604-201ENST00000410574 102 ntBASIC2.28□□□□□ -2.04
CDX4O14627 RNU6-387P-201ENST00000411331 105 ntBASIC2.28□□□□□ -2.04
CDX4O14627 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
CDX4O14627 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.28□□□□□ -2.04
CDX4O14627 AL109913.1-201ENST00000421173 514 ntBASIC2.28□□□□□ -2.04
CDX4O14627 AC009414.1-201ENST00000427200 443 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms