Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 RPS3AP22-201ENST00000488297 769 ntBASIC1.29□□□□□ -2.2
UBFD1O14562 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.29□□□□□ -2.2
UBFD1O14562 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.29□□□□□ -2.2
UBFD1O14562 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.29□□□□□ -2.2
UBFD1O14562 AC034114.1-201ENST00000520293 285 ntBASIC1.29□□□□□ -2.2
UBFD1O14562 ARL2BPP2-201ENST00000550907 489 ntBASIC1.29□□□□□ -2.2
UBFD1O14562 AL160236.1-201ENST00000556317 195 ntBASIC1.29□□□□□ -2.2
UBFD1O14562 DUXAP1-201ENST00000556632 463 ntBASIC1.29□□□□□ -2.2
UBFD1O14562 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.29□□□□□ -2.2
UBFD1O14562 AC009712.1-201ENST00000564938 316 ntBASIC1.29□□□□□ -2.2
UBFD1O14562 MIR4782-201ENST00000577987 79 ntBASIC1.29□□□□□ -2.2
UBFD1O14562 MIR544B-201ENST00000582372 78 ntBASIC1.29□□□□□ -2.2
UBFD1O14562 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.29□□□□□ -2.2
UBFD1O14562 AC107952.2-201ENST00000606048 486 ntBASIC1.29□□□□□ -2.2
UBFD1O14562 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.29□□□□□ -2.2
UBFD1O14562 AL356596.1-201ENST00000624230 379 ntBASIC1.29□□□□□ -2.2
UBFD1O14562 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.29□□□□□ -2.2
UBFD1O14562 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.28□□□□□ -2.2
UBFD1O14562 FTH1P15-201ENST00000406984 280 ntBASIC1.28□□□□□ -2.2
UBFD1O14562 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.28□□□□□ -2.2
UBFD1O14562 AL158823.1-201ENST00000418441 478 ntBASIC1.28□□□□□ -2.2
UBFD1O14562 RPS3AP37-201ENST00000419176 745 ntBASIC1.28□□□□□ -2.2
UBFD1O14562 AC008267.5-201ENST00000424928 265 ntBASIC1.28□□□□□ -2.2
UBFD1O14562 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.28□□□□□ -2.2
UBFD1O14562 LARP1BP3-201ENST00000437229 869 ntBASIC1.28□□□□□ -2.2
UBFD1O14562 EEF1A1P39-201ENST00000440791 250 ntBASIC1.28□□□□□ -2.2
UBFD1O14562 MTND6P13-201ENST00000443510 523 ntBASIC1.28□□□□□ -2.2
UBFD1O14562 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.28□□□□□ -2.2
UBFD1O14562 CYP2C59P-201ENST00000457790 269 ntBASIC1.28□□□□□ -2.2
UBFD1O14562 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.28□□□□□ -2.2
UBFD1O14562 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.28□□□□□ -2.2
UBFD1O14562 SNORA31.19-201ENST00000517079 126 ntBASIC1.28□□□□□ -2.2
UBFD1O14562 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.28□□□□□ -2.2
UBFD1O14562 AP005597.4-201ENST00000526762 229 ntBASIC1.28□□□□□ -2.2
UBFD1O14562 AP000907.2-201ENST00000530827 353 ntBASIC1.28□□□□□ -2.2
UBFD1O14562 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
UBFD1O14562 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.28□□□□□ -2.2
UBFD1O14562 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.28□□□□□ -2.2
UBFD1O14562 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.28□□□□□ -2.2
UBFD1O14562 MIR4421-201ENST00000578133 69 ntBASIC1.28□□□□□ -2.2
UBFD1O14562 BNIP3P9-201ENST00000603714 553 ntBASIC1.28□□□□□ -2.2
UBFD1O14562 AC080013.3-201ENST00000606839 578 ntBASIC1.28□□□□□ -2.2
UBFD1O14562 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.28□□□□□ -2.2
UBFD1O14562 MIR6078-201ENST00000611069 100 ntBASIC1.28□□□□□ -2.2
UBFD1O14562 AC006338.1-201ENST00000618453 749 ntBASIC1.28□□□□□ -2.2
UBFD1O14562 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.28□□□□□ -2.2
UBFD1O14562 AL138955.1-201ENST00000622881 1040 ntBASIC1.28□□□□□ -2.2
UBFD1O14562 AC091895.1-201ENST00000624494 256 ntBASIC1.28□□□□□ -2.2
UBFD1O14562 AP000776.1-201ENST00000530032 1663 ntBASIC1.27□□□□□ -2.21
UBFD1O14562 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.27□□□□□ -2.21
UBFD1O14562 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
UBFD1O14562 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
UBFD1O14562 Y_RNA.191-201ENST00000363972 113 ntBASIC1.27□□□□□ -2.21
UBFD1O14562 RNU5A-8P-201ENST00000364102 114 ntBASIC1.27□□□□□ -2.21
UBFD1O14562 RNA5SP240-201ENST00000365355 128 ntBASIC1.27□□□□□ -2.21
UBFD1O14562 RNU6-203P-201ENST00000384038 104 ntBASIC1.27□□□□□ -2.21
UBFD1O14562 Y_RNA.466-201ENST00000384294 113 ntBASIC1.27□□□□□ -2.21
UBFD1O14562 RNU6-769P-201ENST00000384407 104 ntBASIC1.27□□□□□ -2.21
UBFD1O14562 MIR561-201ENST00000385216 97 ntBASIC1.27□□□□□ -2.21
UBFD1O14562 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
UBFD1O14562 RNU6-278P-201ENST00000390945 109 ntBASIC1.27□□□□□ -2.21
UBFD1O14562 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.27□□□□□ -2.21
UBFD1O14562 AC244636.1-201ENST00000421152 228 ntBASIC1.27□□□□□ -2.21
UBFD1O14562 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC1.27□□□□□ -2.21
UBFD1O14562 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.27□□□□□ -2.21
UBFD1O14562 MTCO3P46-201ENST00000425787 232 ntBASIC1.27□□□□□ -2.21
UBFD1O14562 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.27□□□□□ -2.21
UBFD1O14562 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.27□□□□□ -2.21
UBFD1O14562 HSPE1P24-201ENST00000450782 238 ntBASIC1.27□□□□□ -2.21
UBFD1O14562 AL441985.1-201ENST00000457727 251 ntBASIC1.27□□□□□ -2.21
UBFD1O14562 RNU1-123P-201ENST00000458950 160 ntBASIC1.27□□□□□ -2.21
UBFD1O14562 AC004223.1-201ENST00000479840 271 ntBASIC1.27□□□□□ -2.21
UBFD1O14562 AC021146.2-201ENST00000504736 556 ntBASIC1.27□□□□□ -2.21
UBFD1O14562 TPT1P8-201ENST00000510120 555 ntBASIC1.27□□□□□ -2.21
UBFD1O14562 AC010587.2-201ENST00000511727 448 ntBASIC1.27□□□□□ -2.21
UBFD1O14562 RNU5B-3P-201ENST00000516601 115 ntBASIC1.27□□□□□ -2.21
UBFD1O14562 SNORA48.11-201ENST00000517015 89 ntBASIC1.27□□□□□ -2.21
UBFD1O14562 CYCSP27-201ENST00000527643 293 ntBASIC1.27□□□□□ -2.21
UBFD1O14562 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.27□□□□□ -2.21
UBFD1O14562 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.27□□□□□ -2.21
UBFD1O14562 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.27□□□□□ -2.21
UBFD1O14562 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.27□□□□□ -2.21
UBFD1O14562 CLIC4P2-201ENST00000601934 717 ntBASIC1.27□□□□□ -2.21
UBFD1O14562 ELOCP5-201ENST00000604924 333 ntBASIC1.27□□□□□ -2.21
UBFD1O14562 AC092953.2-201ENST00000608000 699 ntBASIC1.27□□□□□ -2.21
UBFD1O14562 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.27□□□□□ -2.21
UBFD1O14562 MIR6504-201ENST00000613520 61 ntBASIC1.27□□□□□ -2.21
UBFD1O14562 AC091304.6-201ENST00000619761 202 ntBASIC1.27□□□□□ -2.21
UBFD1O14562 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
UBFD1O14562 MIR126-201ENST00000362291 85 ntBASIC1.26□□□□□ -2.21
UBFD1O14562 SNORA75B-201ENST00000384053 137 ntBASIC1.26□□□□□ -2.21
UBFD1O14562 Y_RNA.534-201ENST00000384599 112 ntBASIC1.26□□□□□ -2.21
UBFD1O14562 RNU6-1242P-201ENST00000391052 103 ntBASIC1.26□□□□□ -2.21
UBFD1O14562 RNU2-48P-201ENST00000410694 191 ntBASIC1.26□□□□□ -2.21
UBFD1O14562 AC127391.1-201ENST00000411737 98 ntBASIC1.26□□□□□ -2.21
UBFD1O14562 MTATP6P20-201ENST00000414147 562 ntBASIC1.26□□□□□ -2.21
UBFD1O14562 AC016831.2-201ENST00000417179 352 ntBASIC1.26□□□□□ -2.21
UBFD1O14562 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.26□□□□□ -2.21
UBFD1O14562 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.26□□□□□ -2.21
UBFD1O14562 TIMM9P1-201ENST00000436122 256 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 186.5 ms