Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.54□□□□□ -2
RTCAO00442 AC012507.3-201ENST00000603556 477 ntBASIC2.54□□□□□ -2
RTCAO00442 AC008945.2-201ENST00000606056 604 ntBASIC2.54□□□□□ -2
RTCAO00442 MIR6895-201ENST00000613497 78 ntBASIC2.54□□□□□ -2
RTCAO00442 AL161423.1-201ENST00000613700 262 ntBASIC2.54□□□□□ -2
RTCAO00442 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.54□□□□□ -2
RTCAO00442 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.54□□□□□ -2
RTCAO00442 MIR6863-201ENST00000636112 90 ntBASIC2.54□□□□□ -2
RTCAO00442 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.54□□□□□ -2
RTCAO00442 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.54□□□□□ -2
RTCAO00442 Z75746.1-201ENST00000440243 2080 ntBASIC2.53□□□□□ -2
RTCAO00442 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.53□□□□□ -2
RTCAO00442 AC138393.1-203ENST00000327086 343 ntBASIC2.53□□□□□ -2
RTCAO00442 MIR412-201ENST00000362142 91 ntBASIC2.53□□□□□ -2
RTCAO00442 SNORA80A-201ENST00000363922 136 ntBASIC2.53□□□□□ -2
RTCAO00442 SNORA3A-201ENST00000364113 130 ntBASIC2.53□□□□□ -2
RTCAO00442 SNORA6-201ENST00000384033 151 ntBASIC2.53□□□□□ -2
RTCAO00442 SNORA75B-201ENST00000384053 137 ntBASIC2.53□□□□□ -2
RTCAO00442 RNU6-517P-201ENST00000384362 110 ntBASIC2.53□□□□□ -2
RTCAO00442 RNA5SP210-201ENST00000391034 120 ntBASIC2.53□□□□□ -2
RTCAO00442 RNU6-1158P-201ENST00000391167 107 ntBASIC2.53□□□□□ -2
RTCAO00442 CISD1P1-201ENST00000393907 327 ntBASIC2.53□□□□□ -2
RTCAO00442 AL360182.1-201ENST00000397433 468 ntBASIC2.53□□□□□ -2
RTCAO00442 RNU2-52P-201ENST00000410680 190 ntBASIC2.53□□□□□ -2
RTCAO00442 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.53□□□□□ -2
RTCAO00442 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.53□□□□□ -2
RTCAO00442 CACYBPP2-201ENST00000453625 678 ntBASIC2.53□□□□□ -2
RTCAO00442 AC073901.1-201ENST00000462471 408 ntBASIC2.53□□□□□ -2
RTCAO00442 RPL23AP11-201ENST00000475260 469 ntBASIC2.53□□□□□ -2
RTCAO00442 RPL9P33-201ENST00000484311 566 ntBASIC2.53□□□□□ -2
RTCAO00442 RPL36AP48-201ENST00000485521 314 ntBASIC2.53□□□□□ -2
RTCAO00442 AC096576.1-201ENST00000489014 359 ntBASIC2.53□□□□□ -2
RTCAO00442 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.53□□□□□ -2
RTCAO00442 AC022493.1-201ENST00000492984 337 ntBASIC2.53□□□□□ -2
RTCAO00442 AC097462.2-201ENST00000504623 481 ntBASIC2.53□□□□□ -2
RTCAO00442 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.53□□□□□ -2
RTCAO00442 RNU6-506P-201ENST00000516553 94 ntBASIC2.53□□□□□ -2
RTCAO00442 RNU5B-3P-201ENST00000516601 115 ntBASIC2.53□□□□□ -2
RTCAO00442 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.53□□□□□ -2
RTCAO00442 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.53□□□□□ -2
RTCAO00442 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.53□□□□□ -2
RTCAO00442 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.53□□□□□ -2
RTCAO00442 AC121758.2-201ENST00000553271 193 ntBASIC2.53□□□□□ -2
RTCAO00442 GTF3AP2-201ENST00000557014 266 ntBASIC2.53□□□□□ -2
RTCAO00442 MTCO3P23-201ENST00000561363 289 ntBASIC2.53□□□□□ -2
RTCAO00442 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.53□□□□□ -2
RTCAO00442 MIR548AC-201ENST00000585049 88 ntBASIC2.53□□□□□ -2
RTCAO00442 AL138889.2-201ENST00000603883 242 ntBASIC2.53□□□□□ -2
RTCAO00442 AC126118.1-201ENST00000607744 628 ntBASIC2.53□□□□□ -2
RTCAO00442 AC024940.5-201ENST00000622889 474 ntBASIC2.53□□□□□ -2
RTCAO00442 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
RTCAO00442 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RTCAO00442 AC006020.1-201ENST00000420179 1854 ntBASIC2.52□□□□□ -2.01
RTCAO00442 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RTCAO00442 Y_RNA.3-201ENST00000362331 103 ntBASIC2.52□□□□□ -2.01
RTCAO00442 RNU6-166P-201ENST00000384371 107 ntBASIC2.52□□□□□ -2.01
RTCAO00442 Y_RNA.505-201ENST00000384489 102 ntBASIC2.52□□□□□ -2.01
RTCAO00442 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
RTCAO00442 SNORD23.1-201ENST00000408212 104 ntBASIC2.52□□□□□ -2.01
RTCAO00442 RNU2-9P-201ENST00000410194 145 ntBASIC2.52□□□□□ -2.01
RTCAO00442 RNU6-1025P-201ENST00000410629 104 ntBASIC2.52□□□□□ -2.01
RTCAO00442 AL118520.1-201ENST00000450770 291 ntBASIC2.52□□□□□ -2.01
RTCAO00442 BTF3P15-201ENST00000455606 336 ntBASIC2.52□□□□□ -2.01
RTCAO00442 AL162395.1-201ENST00000457882 422 ntBASIC2.52□□□□□ -2.01
RTCAO00442 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.52□□□□□ -2.01
RTCAO00442 RNU7-63P-201ENST00000459054 62 ntBASIC2.52□□□□□ -2.01
RTCAO00442 RNU6-261P-201ENST00000459506 102 ntBASIC2.52□□□□□ -2.01
RTCAO00442 AC092436.1-201ENST00000506450 503 ntBASIC2.52□□□□□ -2.01
RTCAO00442 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.52□□□□□ -2.01
RTCAO00442 AC104136.1-201ENST00000512969 394 ntBASIC2.52□□□□□ -2.01
RTCAO00442 LRRC34P2-201ENST00000514850 553 ntBASIC2.52□□□□□ -2.01
RTCAO00442 RNU6-581P-201ENST00000516214 105 ntBASIC2.52□□□□□ -2.01
RTCAO00442 Y_RNA.693-201ENST00000516641 110 ntBASIC2.52□□□□□ -2.01
RTCAO00442 RNU6-572P-201ENST00000516724 80 ntBASIC2.52□□□□□ -2.01
RTCAO00442 ACA59.2-201ENST00000517061 156 ntBASIC2.52□□□□□ -2.01
RTCAO00442 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.52□□□□□ -2.01
RTCAO00442 AC025755.1-201ENST00000521306 278 ntBASIC2.52□□□□□ -2.01
RTCAO00442 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.52□□□□□ -2.01
RTCAO00442 AC118273.2-201ENST00000532092 465 ntBASIC2.52□□□□□ -2.01
RTCAO00442 AC079598.5-201ENST00000547460 117 ntBASIC2.52□□□□□ -2.01
RTCAO00442 RPS3AP23-202ENST00000574601 686 ntBASIC2.52□□□□□ -2.01
RTCAO00442 AC023043.3-201ENST00000593113 385 ntBASIC2.52□□□□□ -2.01
RTCAO00442 AC078899.2-201ENST00000595282 212 ntBASIC2.52□□□□□ -2.01
RTCAO00442 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.52□□□□□ -2.01
RTCAO00442 AL158032.1-201ENST00000605401 106 ntBASIC2.52□□□□□ -2.01
RTCAO00442 MIR7106-201ENST00000612419 65 ntBASIC2.52□□□□□ -2.01
RTCAO00442 RMST_4.1-201ENST00000616886 107 ntBASIC2.52□□□□□ -2.01
RTCAO00442 U4.5-201ENST00000617137 123 ntBASIC2.52□□□□□ -2.01
RTCAO00442 AC068792.1-201ENST00000621354 417 ntBASIC2.52□□□□□ -2.01
RTCAO00442 AC139792.3-201ENST00000623525 224 ntBASIC2.52□□□□□ -2.01
RTCAO00442 AC012640.5-201ENST00000623897 319 ntBASIC2.52□□□□□ -2.01
RTCAO00442 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.52□□□□□ -2.01
RTCAO00442 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
RTCAO00442 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.52□□□□□ -2.01
RTCAO00442 RNU6-1287P-201ENST00000362914 107 ntBASIC2.51□□□□□ -2.01
RTCAO00442 RNU6-1085P-201ENST00000363576 107 ntBASIC2.51□□□□□ -2.01
RTCAO00442 Z98749.2-208ENST00000381646 500 ntBASIC2.51□□□□□ -2.01
RTCAO00442 RNU6-1060P-201ENST00000384664 107 ntBASIC2.51□□□□□ -2.01
RTCAO00442 CALM2P3-201ENST00000400429 449 ntBASIC2.51□□□□□ -2.01
RTCAO00442 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms