Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 AC138623.1-201ENST00000418060 216 ntBASIC1.59□□□□□ -2.15
DFFAO00273 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.59□□□□□ -2.15
DFFAO00273 MTCO2P21-201ENST00000419780 677 ntBASIC1.59□□□□□ -2.15
DFFAO00273 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.59□□□□□ -2.15
DFFAO00273 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.59□□□□□ -2.15
DFFAO00273 AL353777.1-201ENST00000425552 326 ntBASIC1.59□□□□□ -2.15
DFFAO00273 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.59□□□□□ -2.15
DFFAO00273 IFNA20P-201ENST00000436840 528 ntBASIC1.59□□□□□ -2.15
DFFAO00273 RPL23AP6-201ENST00000446637 472 ntBASIC1.59□□□□□ -2.15
DFFAO00273 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.59□□□□□ -2.15
DFFAO00273 FCF1P6-201ENST00000456841 595 ntBASIC1.59□□□□□ -2.15
DFFAO00273 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.59□□□□□ -2.15
DFFAO00273 snoU13.23-201ENST00000458863 104 ntBASIC1.59□□□□□ -2.15
DFFAO00273 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.59□□□□□ -2.15
DFFAO00273 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.59□□□□□ -2.15
DFFAO00273 RNU6-201P-201ENST00000517100 61 ntBASIC1.59□□□□□ -2.15
DFFAO00273 RNU6-667P-201ENST00000517186 102 ntBASIC1.59□□□□□ -2.15
DFFAO00273 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.59□□□□□ -2.15
DFFAO00273 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.59□□□□□ -2.15
DFFAO00273 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.59□□□□□ -2.15
DFFAO00273 AC135279.1-201ENST00000543493 504 ntBASIC1.59□□□□□ -2.15
DFFAO00273 SNORD53B-201ENST00000577887 78 ntBASIC1.59□□□□□ -2.15
DFFAO00273 BNIP3P40-201ENST00000596017 556 ntBASIC1.59□□□□□ -2.15
DFFAO00273 AC021646.1-201ENST00000605469 484 ntBASIC1.59□□□□□ -2.15
DFFAO00273 AC144521.1-201ENST00000607148 956 ntBASIC1.59□□□□□ -2.15
DFFAO00273 AC098614.4-201ENST00000607601 462 ntBASIC1.59□□□□□ -2.15
DFFAO00273 AL773524.1-201ENST00000614065 229 ntBASIC1.59□□□□□ -2.15
DFFAO00273 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.59□□□□□ -2.15
DFFAO00273 MTND4P9-201ENST00000507819 1346 ntBASIC1.59□□□□□ -2.16
DFFAO00273 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
DFFAO00273 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.58□□□□□ -2.16
DFFAO00273 Y_RNA.302-201ENST00000364997 102 ntBASIC1.58□□□□□ -2.16
DFFAO00273 RNU6-1176P-201ENST00000390955 107 ntBASIC1.58□□□□□ -2.16
DFFAO00273 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
DFFAO00273 MIR1323-201ENST00000408090 73 ntBASIC1.58□□□□□ -2.16
DFFAO00273 AC009518.2-201ENST00000418056 731 ntBASIC1.58□□□□□ -2.16
DFFAO00273 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.58□□□□□ -2.16
DFFAO00273 AC244636.1-201ENST00000421152 228 ntBASIC1.58□□□□□ -2.16
DFFAO00273 PGBD4P6-201ENST00000421501 610 ntBASIC1.58□□□□□ -2.16
DFFAO00273 AL513185.2-201ENST00000425543 193 ntBASIC1.58□□□□□ -2.16
DFFAO00273 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.58□□□□□ -2.16
DFFAO00273 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.58□□□□□ -2.16
DFFAO00273 AL008629.1-201ENST00000438615 184 ntBASIC1.58□□□□□ -2.16
DFFAO00273 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.58□□□□□ -2.16
DFFAO00273 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.58□□□□□ -2.16
DFFAO00273 AL583843.1-201ENST00000456070 346 ntBASIC1.58□□□□□ -2.16
DFFAO00273 AC006512.1-201ENST00000468816 291 ntBASIC1.58□□□□□ -2.16
DFFAO00273 AC023790.1-201ENST00000482174 347 ntBASIC1.58□□□□□ -2.16
DFFAO00273 RNU2-53P-201ENST00000516257 147 ntBASIC1.58□□□□□ -2.16
DFFAO00273 CYCSP27-201ENST00000527643 293 ntBASIC1.58□□□□□ -2.16
DFFAO00273 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.58□□□□□ -2.16
DFFAO00273 AC015712.3-201ENST00000559380 164 ntBASIC1.58□□□□□ -2.16
DFFAO00273 AC092325.1-201ENST00000566449 554 ntBASIC1.58□□□□□ -2.16
DFFAO00273 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.58□□□□□ -2.16
DFFAO00273 BNIP3P30-201ENST00000601184 574 ntBASIC1.58□□□□□ -2.16
DFFAO00273 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
DFFAO00273 AC006338.1-201ENST00000618453 749 ntBASIC1.58□□□□□ -2.16
DFFAO00273 AC009269.6-201ENST00000621778 588 ntBASIC1.58□□□□□ -2.16
DFFAO00273 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.58□□□□□ -2.16
DFFAO00273 MIR3529-201ENST00000637713 78 ntBASIC1.58□□□□□ -2.16
DFFAO00273 AL445984.1-201ENST00000637834 659 ntBASIC1.58□□□□□ -2.16
DFFAO00273 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.58□□□□□ -2.16
DFFAO00273 RNU6-960P-201ENST00000364056 120 ntBASIC1.57□□□□□ -2.16
DFFAO00273 RNY4P16-201ENST00000364768 94 ntBASIC1.57□□□□□ -2.16
DFFAO00273 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.57□□□□□ -2.16
DFFAO00273 RNU6-843P-201ENST00000384454 104 ntBASIC1.57□□□□□ -2.16
DFFAO00273 RNU6-83P-201ENST00000384568 112 ntBASIC1.57□□□□□ -2.16
DFFAO00273 SNORA8-201ENST00000384574 139 ntBASIC1.57□□□□□ -2.16
DFFAO00273 MIR186-201ENST00000384988 86 ntBASIC1.57□□□□□ -2.16
DFFAO00273 RNA5SP213-201ENST00000391031 106 ntBASIC1.57□□□□□ -2.16
DFFAO00273 MIR1304-201ENST00000408243 91 ntBASIC1.57□□□□□ -2.16
DFFAO00273 AL365338.1-201ENST00000422282 858 ntBASIC1.57□□□□□ -2.16
DFFAO00273 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.57□□□□□ -2.16
DFFAO00273 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.57□□□□□ -2.16
DFFAO00273 AL606517.1-201ENST00000446914 387 ntBASIC1.57□□□□□ -2.16
DFFAO00273 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.57□□□□□ -2.16
DFFAO00273 AC087884.1-201ENST00000469738 328 ntBASIC1.57□□□□□ -2.16
DFFAO00273 AC119751.4-201ENST00000507498 357 ntBASIC1.57□□□□□ -2.16
DFFAO00273 RNU2-10P-201ENST00000516375 211 ntBASIC1.57□□□□□ -2.16
DFFAO00273 AC109329.1-201ENST00000518744 317 ntBASIC1.57□□□□□ -2.16
DFFAO00273 AC107934.1-201ENST00000522215 217 ntBASIC1.57□□□□□ -2.16
DFFAO00273 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.57□□□□□ -2.16
DFFAO00273 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.57□□□□□ -2.16
DFFAO00273 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.57□□□□□ -2.16
DFFAO00273 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.57□□□□□ -2.16
DFFAO00273 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.57□□□□□ -2.16
DFFAO00273 AC104984.5-201ENST00000586878 94 ntBASIC1.57□□□□□ -2.16
DFFAO00273 AL022154.1-201ENST00000604698 785 ntBASIC1.57□□□□□ -2.16
DFFAO00273 AL355816.2-201ENST00000610049 647 ntBASIC1.57□□□□□ -2.16
DFFAO00273 AL139418.1-201ENST00000613613 177 ntBASIC1.57□□□□□ -2.16
DFFAO00273 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.57□□□□□ -2.16
DFFAO00273 HAUS6P2-201ENST00000433254 2404 ntBASIC1.57□□□□□ -2.16
DFFAO00273 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
DFFAO00273 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
DFFAO00273 RNU6-942P-201ENST00000363002 107 ntBASIC1.56□□□□□ -2.16
DFFAO00273 RNU4-42P-201ENST00000364738 142 ntBASIC1.56□□□□□ -2.16
DFFAO00273 RNU6-487P-201ENST00000365430 104 ntBASIC1.56□□□□□ -2.16
DFFAO00273 Y_RNA.623-201ENST00000411128 95 ntBASIC1.56□□□□□ -2.16
DFFAO00273 POLHP1-201ENST00000411806 470 ntBASIC1.56□□□□□ -2.16
DFFAO00273 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms