Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.85□□□□□ -2.11
AP3B1O00203 AC022254.1-201ENST00000567857 235 ntBASIC1.85□□□□□ -2.11
AP3B1O00203 MIR3198-2-201ENST00000577868 80 ntBASIC1.85□□□□□ -2.11
AP3B1O00203 AL022154.1-201ENST00000604698 785 ntBASIC1.85□□□□□ -2.11
AP3B1O00203 AC103710.2-201ENST00000609912 942 ntBASIC1.85□□□□□ -2.11
AP3B1O00203 AL607023.1-201ENST00000620045 248 ntBASIC1.85□□□□□ -2.11
AP3B1O00203 AC093648.1-201ENST00000623546 606 ntBASIC1.85□□□□□ -2.11
AP3B1O00203 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.85□□□□□ -2.11
AP3B1O00203 AC092192.1-201ENST00000633154 1018 ntBASIC1.85□□□□□ -2.11
AP3B1O00203 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
AP3B1O00203 RNU6-1274P-201ENST00000384557 107 ntBASIC1.84□□□□□ -2.11
AP3B1O00203 MIR29B2-201ENST00000385055 81 ntBASIC1.84□□□□□ -2.11
AP3B1O00203 RNU6-1140P-201ENST00000410517 106 ntBASIC1.84□□□□□ -2.11
AP3B1O00203 RNU2-48P-201ENST00000410694 191 ntBASIC1.84□□□□□ -2.11
AP3B1O00203 SRIP3-201ENST00000413200 219 ntBASIC1.84□□□□□ -2.11
AP3B1O00203 AC106883.1-201ENST00000418805 562 ntBASIC1.84□□□□□ -2.11
AP3B1O00203 AL445685.2-201ENST00000422551 342 ntBASIC1.84□□□□□ -2.11
AP3B1O00203 BX510359.4-201ENST00000423750 193 ntBASIC1.84□□□□□ -2.11
AP3B1O00203 AL353777.1-201ENST00000425552 326 ntBASIC1.84□□□□□ -2.11
AP3B1O00203 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.84□□□□□ -2.11
AP3B1O00203 USP9YP18-201ENST00000425912 695 ntBASIC1.84□□□□□ -2.11
AP3B1O00203 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.84□□□□□ -2.11
AP3B1O00203 AL365400.1-201ENST00000431854 640 ntBASIC1.84□□□□□ -2.11
AP3B1O00203 HSPE1P21-201ENST00000438283 308 ntBASIC1.84□□□□□ -2.11
AP3B1O00203 ANXA2P1-201ENST00000505539 926 ntBASIC1.84□□□□□ -2.11
AP3B1O00203 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.84□□□□□ -2.11
AP3B1O00203 PTP4A1P4-201ENST00000512479 322 ntBASIC1.84□□□□□ -2.11
AP3B1O00203 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.84□□□□□ -2.11
AP3B1O00203 Y_RNA.689-201ENST00000516589 107 ntBASIC1.84□□□□□ -2.11
AP3B1O00203 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.84□□□□□ -2.11
AP3B1O00203 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.84□□□□□ -2.11
AP3B1O00203 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.84□□□□□ -2.11
AP3B1O00203 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.84□□□□□ -2.11
AP3B1O00203 AC025678.1-201ENST00000567861 338 ntBASIC1.84□□□□□ -2.11
AP3B1O00203 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.84□□□□□ -2.11
AP3B1O00203 MTCO2P2-201ENST00000591258 225 ntBASIC1.84□□□□□ -2.11
AP3B1O00203 U6.42-201ENST00000618440 107 ntBASIC1.84□□□□□ -2.11
AP3B1O00203 AC006338.1-201ENST00000618453 749 ntBASIC1.84□□□□□ -2.11
AP3B1O00203 SCARNA4-202ENST00000625402 129 ntBASIC1.84□□□□□ -2.11
AP3B1O00203 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
AP3B1O00203 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.83□□□□□ -2.12
AP3B1O00203 U8.2-201ENST00000363156 134 ntBASIC1.83□□□□□ -2.12
AP3B1O00203 RNU6-72P-201ENST00000384285 79 ntBASIC1.83□□□□□ -2.12
AP3B1O00203 MIR934-201ENST00000401241 83 ntBASIC1.83□□□□□ -2.12
AP3B1O00203 CBX3P9-201ENST00000402326 552 ntBASIC1.83□□□□□ -2.12
AP3B1O00203 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.83□□□□□ -2.12
AP3B1O00203 AC092809.3-201ENST00000415453 231 ntBASIC1.83□□□□□ -2.12
AP3B1O00203 AL008629.1-201ENST00000438615 184 ntBASIC1.83□□□□□ -2.12
AP3B1O00203 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.83□□□□□ -2.12
AP3B1O00203 NDUFB1P2-201ENST00000449477 176 ntBASIC1.83□□□□□ -2.12
AP3B1O00203 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.83□□□□□ -2.12
AP3B1O00203 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
AP3B1O00203 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.83□□□□□ -2.12
AP3B1O00203 SNORA59A-201ENST00000459326 152 ntBASIC1.83□□□□□ -2.12
AP3B1O00203 AL121594.1-201ENST00000475906 575 ntBASIC1.83□□□□□ -2.12
AP3B1O00203 RPL21P99-201ENST00000480369 423 ntBASIC1.83□□□□□ -2.12
AP3B1O00203 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.83□□□□□ -2.12
AP3B1O00203 CBX3P4-201ENST00000538909 354 ntBASIC1.83□□□□□ -2.12
AP3B1O00203 AC135279.1-201ENST00000543493 504 ntBASIC1.83□□□□□ -2.12
AP3B1O00203 AC091544.4-201ENST00000555268 342 ntBASIC1.83□□□□□ -2.12
AP3B1O00203 MIR4419B-201ENST00000577260 68 ntBASIC1.83□□□□□ -2.12
AP3B1O00203 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.83□□□□□ -2.12
AP3B1O00203 AC012065.4-201ENST00000602445 679 ntBASIC1.83□□□□□ -2.12
AP3B1O00203 AL022345.1-201ENST00000607292 135 ntBASIC1.83□□□□□ -2.12
AP3B1O00203 AL355816.2-201ENST00000610049 647 ntBASIC1.83□□□□□ -2.12
AP3B1O00203 AL359547.2-201ENST00000615810 418 ntBASIC1.83□□□□□ -2.12
AP3B1O00203 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
AP3B1O00203 Y_RNA.97-201ENST00000363094 102 ntBASIC1.82□□□□□ -2.12
AP3B1O00203 RNU6-234P-201ENST00000365229 104 ntBASIC1.82□□□□□ -2.12
AP3B1O00203 RNU6-622P-201ENST00000384272 103 ntBASIC1.82□□□□□ -2.12
AP3B1O00203 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
AP3B1O00203 MIR1262-201ENST00000408276 93 ntBASIC1.82□□□□□ -2.12
AP3B1O00203 RNA5SP390-201ENST00000410191 113 ntBASIC1.82□□□□□ -2.12
AP3B1O00203 RNU2-23P-201ENST00000410545 195 ntBASIC1.82□□□□□ -2.12
AP3B1O00203 RPL23AP30-201ENST00000432419 501 ntBASIC1.82□□□□□ -2.12
AP3B1O00203 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.82□□□□□ -2.12
AP3B1O00203 MTND2P39-201ENST00000457230 764 ntBASIC1.82□□□□□ -2.12
AP3B1O00203 AC119751.4-201ENST00000507498 357 ntBASIC1.82□□□□□ -2.12
AP3B1O00203 RNU5A-4P-201ENST00000516588 111 ntBASIC1.82□□□□□ -2.12
AP3B1O00203 AC107934.1-201ENST00000522215 217 ntBASIC1.82□□□□□ -2.12
AP3B1O00203 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.82□□□□□ -2.12
AP3B1O00203 MTND1P8-201ENST00000571424 950 ntBASIC1.82□□□□□ -2.12
AP3B1O00203 AL353778.1-201ENST00000603149 408 ntBASIC1.82□□□□□ -2.12
AP3B1O00203 SNRPGP19-201ENST00000603826 189 ntBASIC1.82□□□□□ -2.12
AP3B1O00203 AC105148.1-201ENST00000604961 409 ntBASIC1.82□□□□□ -2.12
AP3B1O00203 AL139022.2-201ENST00000606934 443 ntBASIC1.82□□□□□ -2.12
AP3B1O00203 AC103810.8-201ENST00000607347 118 ntBASIC1.82□□□□□ -2.12
AP3B1O00203 AC012360.2-201ENST00000609349 391 ntBASIC1.82□□□□□ -2.12
AP3B1O00203 AC092106.3-201ENST00000611308 722 ntBASIC1.82□□□□□ -2.12
AP3B1O00203 AC087241.4-201ENST00000612441 480 ntBASIC1.82□□□□□ -2.12
AP3B1O00203 AL132822.1-201ENST00000617063 513 ntBASIC1.82□□□□□ -2.12
AP3B1O00203 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
AP3B1O00203 ZNF876P-202ENST00000398732 1485 ntBASIC1.82□□□□□ -2.12
AP3B1O00203 AC233981.2-201ENST00000611524 1614 ntBASIC1.81□□□□□ -2.12
AP3B1O00203 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
AP3B1O00203 RNU1-58P-201ENST00000362413 163 ntBASIC1.81□□□□□ -2.12
AP3B1O00203 RNU6-942P-201ENST00000363002 107 ntBASIC1.81□□□□□ -2.12
AP3B1O00203 RNY4P16-201ENST00000364768 94 ntBASIC1.81□□□□□ -2.12
AP3B1O00203 MIR23A-201ENST00000385245 73 ntBASIC1.81□□□□□ -2.12
AP3B1O00203 RPS20P15-201ENST00000412792 311 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms