Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC005046.1-201ENST00000608515 625 ntBASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 uc_338.14-201ENST00000613162 166 ntBASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 AL031601.2-202ENST00000622650 282 ntBASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 Y_RNA.41-201ENST00000362646 102 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 RNA5SP393-201ENST00000363423 117 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 RNU6-1303P-201ENST00000364841 107 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 MTCO3P40-201ENST00000392516 676 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 RNU2-3P-201ENST00000410144 191 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 RNU6-607P-201ENST00000411283 108 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 CYCSP33-201ENST00000414485 327 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 RPL7P54-201ENST00000438336 674 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 DNAJC19P4-201ENST00000440115 345 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 AC012308.1-201ENST00000451232 178 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 CACYBPP2-201ENST00000453625 678 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 RPS27AP9-201ENST00000477681 438 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 RN7SL429P-201ENST00000479090 223 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 AC103975.1-201ENST00000482506 483 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 AL163973.1-201ENST00000484753 577 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 RN7SL489P-201ENST00000486185 223 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 RN7SL327P-201ENST00000488659 223 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 RNU4-29P-201ENST00000515943 174 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 SNORA31.18-201ENST00000517043 134 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 RN7SKP40-201ENST00000517211 242 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 HIF1AP1-201ENST00000553642 175 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 MIR4435-1-201ENST00000582552 80 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 MIR5194-201ENST00000582634 120 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 AC078795.2-201ENST00000602835 1252 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 AC008121.1-201ENST00000603244 268 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 AL670379.10-201ENST00000604330 253 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 AP000787.2-201ENST00000604432 568 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 AL670379.9-201ENST00000605428 253 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 AC017083.3-201ENST00000609955 700 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 HULC.1-201ENST00000612720 240 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 RN7SL853P-201ENST00000617250 223 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 AC026585.1-201ENST00000619582 524 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 AC073534.2-201ENST00000620377 381 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 AC068792.1-201ENST00000621354 417 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 AC006020.1-201ENST00000420179 1854 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 AL109809.4-201ENST00000603520 2185 ntBASIC2.43□□□□□ -2.02
NPIPA3F8WFD2 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 AL359854.1-201ENST00000614203 1594 ntBASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 RNU6-942P-201ENST00000363002 107 ntBASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 RNU6-1127P-201ENST00000384580 107 ntBASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 AL445529.1-201ENST00000398713 389 ntBASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 AL356057.3-201ENST00000402607 340 ntBASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 MORF4L1P6-201ENST00000418771 268 ntBASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 AC073415.1-201ENST00000449240 153 ntBASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 EEF1B2P7-201ENST00000451177 676 ntBASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 GSTA11P-201ENST00000452866 669 ntBASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 RPL36AP48-201ENST00000485521 314 ntBASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 LRRC34P2-201ENST00000514850 553 ntBASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 RPPH1-2P-201ENST00000516688 293 ntBASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 AP004607.1-201ENST00000524456 203 ntBASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 AP003034.1-201ENST00000534621 422 ntBASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 AC009163.5-201ENST00000575421 637 ntBASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 MTND5P30-201ENST00000452896 1731 ntBASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 AL354685.2-201ENST00000448218 1447 ntBASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 AC010329.5-201ENST00000623497 2174 ntBASIC2.42□□□□□ -2.02
NPIPA3F8WFD2 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.41□□□□□ -2.02
NPIPA3F8WFD2 MTND4P27-201ENST00000450813 1354 ntBASIC2.41□□□□□ -2.02
NPIPA3F8WFD2 AL139276.1-201ENST00000311910 1001 ntBASIC2.41□□□□□ -2.02
NPIPA3F8WFD2 RNU6-1085P-201ENST00000363576 107 ntBASIC2.41□□□□□ -2.02
NPIPA3F8WFD2 RNA5SP68-201ENST00000363885 119 ntBASIC2.41□□□□□ -2.02
NPIPA3F8WFD2 Y_RNA.255-201ENST00000364581 97 ntBASIC2.41□□□□□ -2.02
NPIPA3F8WFD2 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
NPIPA3F8WFD2 RNU6-434P-201ENST00000384376 107 ntBASIC2.41□□□□□ -2.02
NPIPA3F8WFD2 SNORA16.2-201ENST00000390991 127 ntBASIC2.41□□□□□ -2.02
NPIPA3F8WFD2 CALM2P3-201ENST00000400429 449 ntBASIC2.41□□□□□ -2.02
NPIPA3F8WFD2 RNA5SP508-201ENST00000411327 119 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms