Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 SNORD58.1-201ENST00000391313 66 ntBASIC4.81□□□□□ -1.64
USP17L11C9JVI0 RNU6ATAC-201ENST00000408749 126 ntBASIC4.81□□□□□ -1.64
USP17L11C9JVI0 RN7SKP177-201ENST00000410567 355 ntBASIC4.81□□□□□ -1.64
USP17L11C9JVI0 EIF1P2-201ENST00000428233 350 ntBASIC4.81□□□□□ -1.64
USP17L11C9JVI0 AL445305.1-201ENST00000432577 575 ntBASIC4.81□□□□□ -1.64
USP17L11C9JVI0 MTND2P29-201ENST00000438595 412 ntBASIC4.81□□□□□ -1.64
USP17L11C9JVI0 AC016700.2-201ENST00000446011 156 ntBASIC4.81□□□□□ -1.64
USP17L11C9JVI0 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.81□□□□□ -1.64
USP17L11C9JVI0 AP000870.1-201ENST00000472927 406 ntBASIC4.81□□□□□ -1.64
USP17L11C9JVI0 AC097462.2-201ENST00000504623 481 ntBASIC4.81□□□□□ -1.64
USP17L11C9JVI0 AC091874.1-201ENST00000511402 339 ntBASIC4.81□□□□□ -1.64
USP17L11C9JVI0 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.81□□□□□ -1.64
USP17L11C9JVI0 IGKV2D-19-201ENST00000523346 262 ntBASIC4.81□□□□□ -1.64
USP17L11C9JVI0 AC011602.1-201ENST00000546484 331 ntBASIC4.81□□□□□ -1.64
USP17L11C9JVI0 NACAP3-201ENST00000552100 481 ntBASIC4.81□□□□□ -1.64
USP17L11C9JVI0 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.81□□□□□ -1.64
USP17L11C9JVI0 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.81□□□□□ -1.64
USP17L11C9JVI0 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.81□□□□□ -1.64
USP17L11C9JVI0 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.81□□□□□ -1.64
USP17L11C9JVI0 MIR6500-201ENST00000622700 86 ntBASIC4.81□□□□□ -1.64
USP17L11C9JVI0 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
USP17L11C9JVI0 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
USP17L11C9JVI0 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
USP17L11C9JVI0 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
USP17L11C9JVI0 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
USP17L11C9JVI0 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.8□□□□□ -1.64
USP17L11C9JVI0 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
USP17L11C9JVI0 RNU4-90P-201ENST00000362773 141 ntBASIC4.8□□□□□ -1.64
USP17L11C9JVI0 RNU6-290P-201ENST00000365212 101 ntBASIC4.8□□□□□ -1.64
USP17L11C9JVI0 Y_RNA.462-201ENST00000384268 102 ntBASIC4.8□□□□□ -1.64
USP17L11C9JVI0 RNU6-1035P-201ENST00000384477 107 ntBASIC4.8□□□□□ -1.64
USP17L11C9JVI0 MTHFD2P2-201ENST00000407725 247 ntBASIC4.8□□□□□ -1.64
USP17L11C9JVI0 RNU2-20P-201ENST00000410425 191 ntBASIC4.8□□□□□ -1.64
USP17L11C9JVI0 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.8□□□□□ -1.64
USP17L11C9JVI0 PRELID3BP1-201ENST00000457142 540 ntBASIC4.8□□□□□ -1.64
USP17L11C9JVI0 RNU6-496P-201ENST00000516145 99 ntBASIC4.8□□□□□ -1.64
USP17L11C9JVI0 RN7SKP289-201ENST00000517244 295 ntBASIC4.8□□□□□ -1.64
USP17L11C9JVI0 AC120057.2-201ENST00000571520 271 ntBASIC4.8□□□□□ -1.64
USP17L11C9JVI0 MIR5685-201ENST00000579080 79 ntBASIC4.8□□□□□ -1.64
USP17L11C9JVI0 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.8□□□□□ -1.64
USP17L11C9JVI0 U2.14-201ENST00000615943 113 ntBASIC4.8□□□□□ -1.64
USP17L11C9JVI0 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
USP17L11C9JVI0 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
USP17L11C9JVI0 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
USP17L11C9JVI0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP17L11C9JVI0 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP17L11C9JVI0 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP17L11C9JVI0 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP17L11C9JVI0 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP17L11C9JVI0 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
USP17L11C9JVI0 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP17L11C9JVI0 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USP17L11C9JVI0 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP17L11C9JVI0 Y_RNA.277-201ENST00000364754 102 ntBASIC4.79□□□□□ -1.64
USP17L11C9JVI0 RNU6-926P-201ENST00000384075 107 ntBASIC4.79□□□□□ -1.64
USP17L11C9JVI0 SNORD63-201ENST00000384262 68 ntBASIC4.79□□□□□ -1.64
USP17L11C9JVI0 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP17L11C9JVI0 HSPE1P12-201ENST00000412576 301 ntBASIC4.79□□□□□ -1.64
USP17L11C9JVI0 AC074117.2-201ENST00000417130 397 ntBASIC4.79□□□□□ -1.64
USP17L11C9JVI0 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.79□□□□□ -1.64
USP17L11C9JVI0 AC007969.2-201ENST00000441891 191 ntBASIC4.79□□□□□ -1.64
USP17L11C9JVI0 AC006011.1-201ENST00000442758 349 ntBASIC4.79□□□□□ -1.64
USP17L11C9JVI0 RPL26P9-201ENST00000457466 433 ntBASIC4.79□□□□□ -1.64
USP17L11C9JVI0 MRPL42P6-201ENST00000486397 371 ntBASIC4.79□□□□□ -1.64
USP17L11C9JVI0 SCARNA24.2-201ENST00000516968 130 ntBASIC4.79□□□□□ -1.64
USP17L11C9JVI0 AC100770.1-201ENST00000532310 322 ntBASIC4.79□□□□□ -1.64
USP17L11C9JVI0 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USP17L11C9JVI0 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP17L11C9JVI0 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.79□□□□□ -1.64
USP17L11C9JVI0 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP17L11C9JVI0 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
USP17L11C9JVI0 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
USP17L11C9JVI0 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP17L11C9JVI0 AC016588.2-201ENST00000632484 3021 ntBASIC4.78□□□□□ -1.64
USP17L11C9JVI0 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP17L11C9JVI0 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.78□□□□□ -1.64
USP17L11C9JVI0 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP17L11C9JVI0 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.78□□□□□ -1.64
USP17L11C9JVI0 RNU1-15P-201ENST00000353977 144 ntBASIC4.78□□□□□ -1.64
USP17L11C9JVI0 Y_RNA.297-201ENST00000364950 91 ntBASIC4.78□□□□□ -1.64
USP17L11C9JVI0 RNU6-1280P-201ENST00000365211 107 ntBASIC4.78□□□□□ -1.64
USP17L11C9JVI0 Y_RNA.504-201ENST00000384481 104 ntBASIC4.78□□□□□ -1.64
USP17L11C9JVI0 RPL21P17-201ENST00000397467 475 ntBASIC4.78□□□□□ -1.64
USP17L11C9JVI0 RPS4XP3-201ENST00000398541 413 ntBASIC4.78□□□□□ -1.64
USP17L11C9JVI0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.78□□□□□ -1.64
USP17L11C9JVI0 AL033519.2-201ENST00000403958 392 ntBASIC4.78□□□□□ -1.64
USP17L11C9JVI0 FTH1P15-201ENST00000406984 280 ntBASIC4.78□□□□□ -1.64
USP17L11C9JVI0 RNU2-14P-201ENST00000411053 191 ntBASIC4.78□□□□□ -1.64
USP17L11C9JVI0 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.78□□□□□ -1.64
USP17L11C9JVI0 YPEL5P1-201ENST00000419731 367 ntBASIC4.78□□□□□ -1.64
USP17L11C9JVI0 AC012308.1-201ENST00000451232 178 ntBASIC4.78□□□□□ -1.64
USP17L11C9JVI0 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.78□□□□□ -1.64
USP17L11C9JVI0 RPS27AP10-201ENST00000496103 208 ntBASIC4.78□□□□□ -1.64
USP17L11C9JVI0 AC016632.1-201ENST00000503994 196 ntBASIC4.78□□□□□ -1.64
USP17L11C9JVI0 BTF3L4P4-201ENST00000506381 449 ntBASIC4.78□□□□□ -1.64
USP17L11C9JVI0 RNA5SP143-201ENST00000516936 115 ntBASIC4.78□□□□□ -1.64
USP17L11C9JVI0 IGLV3-26-201ENST00000520756 302 ntBASIC4.78□□□□□ -1.64
USP17L11C9JVI0 AL451007.1-201ENST00000595491 289 ntBASIC4.78□□□□□ -1.64
USP17L11C9JVI0 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.78□□□□□ -1.64
USP17L11C9JVI0 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms