Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AP000484.1-201ENST00000620067 1252 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 UCA1.1-201ENST00000620952 75 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1□□□□□ -2.25
COL6A6A6NMZ7 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 SNORD114-23-201ENST00000363536 72 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 RNU6-884P-201ENST00000363889 107 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 RNU5A-2P-201ENST00000384337 116 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 AL355497.1-201ENST00000406262 551 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 MIR1305-201ENST00000408300 86 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 MIR1290-201ENST00000408735 78 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 NDUFS5P4-201ENST00000412983 318 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 VPS26BP1-201ENST00000417155 755 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 AC004941.2-201ENST00000427009 228 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 RPL7L1P10-201ENST00000427790 463 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 AL353689.1-201ENST00000438895 199 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 AL049734.2-201ENST00000441066 616 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 MTND2P39-201ENST00000457230 764 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 BZW1P2-201ENST00000473537 826 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 MTND2P14-201ENST00000482139 351 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 AC105417.1-201ENST00000514691 285 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 SCARNA3-201ENST00000517097 143 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 NRON-201ENST00000517270 370 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 RNU6-840P-201ENST00000517275 65 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 AC009094.1-201ENST00000564443 426 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 AC004805.2-201ENST00000605382 482 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 RNU6-87P-201ENST00000607561 108 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 AL133445.2-201ENST00000611191 527 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 RNU5A-8P-201ENST00000364102 114 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 RNU4-68P-201ENST00000364314 141 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 Y_RNA.258-201ENST00000364613 105 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 RNA5SP125-201ENST00000364843 120 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 MTCO1P17-201ENST00000411522 491 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 AC074117.2-201ENST00000417130 397 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 ZNF90P2-204ENST00000419323 1075 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 NDUFB4P7-201ENST00000423198 363 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 AL590233.1-201ENST00000430017 456 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 VN1R108P-201ENST00000431580 830 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 MTCYBP3-201ENST00000445588 1137 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 AP000542.1-201ENST00000448473 371 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 RPL30P5-201ENST00000494923 336 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 AC020699.1-201ENST00000505161 445 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 AC090888.2-201ENST00000559765 1144 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 AL136363.1-201ENST00000605349 337 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 AC092953.2-201ENST00000608000 699 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 AC004852.3-201ENST00000614131 326 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 AC027807.2-201ENST00000616099 408 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 AC008443.7-201ENST00000622195 246 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 AC090772.4-201ENST00000623599 362 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 MIR7515-201ENST00000637837 67 ntBASIC0.99□□□□□ -2.25
COL6A6A6NMZ7 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 MIR330-201ENST00000362196 94 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 RNU6-462P-201ENST00000362659 105 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 Y_RNA.245-201ENST00000364493 95 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 RNU1-52P-201ENST00000384190 164 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 RNU6-920P-201ENST00000410926 92 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 AC013410.2-201ENST00000422627 201 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 RSU1P2-202ENST00000437884 485 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 RPS24P1-201ENST00000438550 371 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 AL606662.1-201ENST00000445763 553 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 RNU5A-4P-201ENST00000516588 111 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 SNORA31.16-201ENST00000516773 139 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 AP005597.4-201ENST00000526762 229 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 AC021739.1-201ENST00000559631 174 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 MIR3146-201ENST00000580367 79 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 MIR3616-201ENST00000584070 92 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 MTCO2P2-201ENST00000591258 225 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 AC092106.3-201ENST00000611308 722 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 uc_338.14-201ENST00000613162 166 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 MIR6513-201ENST00000621188 64 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 AL359854.1-201ENST00000614203 1594 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 AC092104.1-201ENST00000497346 1441 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 RNU1-39P-201ENST00000383897 165 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 RNU6-413P-201ENST00000384115 107 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 MIR518D-201ENST00000385014 87 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 RNU2-33P-201ENST00000410344 192 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 MTND3P17-201ENST00000416968 344 ntBASIC0.98□□□□□ -2.25
COL6A6A6NMZ7 AC006366.1-201ENST00000422002 759 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms