Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 RNU6-110P-201ENST00000384508 104 ntBASIC0.13□□□□□ -2.39
CPSF4LA6NMK7 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
CPSF4LA6NMK7 RNU1-139P-201ENST00000391307 165 ntBASIC0.13□□□□□ -2.39
CPSF4LA6NMK7 RPL26P27-201ENST00000414397 437 ntBASIC0.13□□□□□ -2.39
CPSF4LA6NMK7 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC0.13□□□□□ -2.39
CPSF4LA6NMK7 RPL31P54-201ENST00000429803 370 ntBASIC0.13□□□□□ -2.39
CPSF4LA6NMK7 RPS20P10-201ENST00000451209 253 ntBASIC0.13□□□□□ -2.39
CPSF4LA6NMK7 AC098869.1-201ENST00000481627 292 ntBASIC0.13□□□□□ -2.39
CPSF4LA6NMK7 AC011005.2-201ENST00000487324 359 ntBASIC0.13□□□□□ -2.39
CPSF4LA6NMK7 RNA5SP134-201ENST00000516492 96 ntBASIC0.13□□□□□ -2.39
CPSF4LA6NMK7 RNA5SP168-201ENST00000516642 112 ntBASIC0.13□□□□□ -2.39
CPSF4LA6NMK7 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.13□□□□□ -2.39
CPSF4LA6NMK7 AC109329.1-201ENST00000518744 317 ntBASIC0.13□□□□□ -2.39
CPSF4LA6NMK7 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.13□□□□□ -2.39
CPSF4LA6NMK7 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.13□□□□□ -2.39
CPSF4LA6NMK7 AC005951.2-201ENST00000576282 495 ntBASIC0.13□□□□□ -2.39
CPSF4LA6NMK7 HMGN1P30-201ENST00000589286 268 ntBASIC0.13□□□□□ -2.39
CPSF4LA6NMK7 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.13□□□□□ -2.39
CPSF4LA6NMK7 AC130324.3-201ENST00000614165 542 ntBASIC0.13□□□□□ -2.39
CPSF4LA6NMK7 MIR6134-201ENST00000617606 109 ntBASIC0.13□□□□□ -2.39
CPSF4LA6NMK7 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC0.13□□□□□ -2.39
CPSF4LA6NMK7 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
CPSF4LA6NMK7 MTND4P14-201ENST00000435799 1354 ntBASIC0.13□□□□□ -2.39
CPSF4LA6NMK7 FARSBP1-201ENST00000435808 1778 ntBASIC0.12□□□□□ -2.39
CPSF4LA6NMK7 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
CPSF4LA6NMK7 RNU1-119P-201ENST00000391122 165 ntBASIC0.12□□□□□ -2.39
CPSF4LA6NMK7 MTCO1P56-201ENST00000401674 224 ntBASIC0.12□□□□□ -2.39
CPSF4LA6NMK7 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.12□□□□□ -2.39
CPSF4LA6NMK7 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.12□□□□□ -2.39
CPSF4LA6NMK7 SNRPEP9-201ENST00000436794 238 ntBASIC0.12□□□□□ -2.39
CPSF4LA6NMK7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.12□□□□□ -2.39
CPSF4LA6NMK7 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
CPSF4LA6NMK7 HMGN1P13-201ENST00000505795 138 ntBASIC0.12□□□□□ -2.39
CPSF4LA6NMK7 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.12□□□□□ -2.39
CPSF4LA6NMK7 RNU6-1092P-201ENST00000516955 87 ntBASIC0.12□□□□□ -2.39
CPSF4LA6NMK7 AP003355.1-201ENST00000518956 587 ntBASIC0.12□□□□□ -2.39
CPSF4LA6NMK7 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC0.12□□□□□ -2.39
CPSF4LA6NMK7 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.12□□□□□ -2.39
CPSF4LA6NMK7 AC018659.1-201ENST00000551083 169 ntBASIC0.12□□□□□ -2.39
CPSF4LA6NMK7 AL121821.2-201ENST00000556081 394 ntBASIC0.12□□□□□ -2.39
CPSF4LA6NMK7 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.12□□□□□ -2.39
CPSF4LA6NMK7 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.12□□□□□ -2.39
CPSF4LA6NMK7 AC011939.3-201ENST00000613686 466 ntBASIC0.12□□□□□ -2.39
CPSF4LA6NMK7 AC093913.1-201ENST00000614178 329 ntBASIC0.12□□□□□ -2.39
CPSF4LA6NMK7 AL589743.1-201ENST00000551932 2712 ntBASIC0.11□□□□□ -2.39
CPSF4LA6NMK7 RNU4-12P-201ENST00000365233 139 ntBASIC0.11□□□□□ -2.39
CPSF4LA6NMK7 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.11□□□□□ -2.39
CPSF4LA6NMK7 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
CPSF4LA6NMK7 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC0.11□□□□□ -2.39
CPSF4LA6NMK7 C8orf59P1-201ENST00000429930 303 ntBASIC0.11□□□□□ -2.39
CPSF4LA6NMK7 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.11□□□□□ -2.39
CPSF4LA6NMK7 TIMM9P1-201ENST00000436122 256 ntBASIC0.11□□□□□ -2.39
CPSF4LA6NMK7 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.11□□□□□ -2.39
CPSF4LA6NMK7 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.11□□□□□ -2.39
CPSF4LA6NMK7 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.11□□□□□ -2.39
CPSF4LA6NMK7 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.11□□□□□ -2.39
CPSF4LA6NMK7 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC0.11□□□□□ -2.39
CPSF4LA6NMK7 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC0.11□□□□□ -2.39
CPSF4LA6NMK7 APOOP3-201ENST00000536787 586 ntBASIC0.11□□□□□ -2.39
CPSF4LA6NMK7 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.11□□□□□ -2.39
CPSF4LA6NMK7 AC091489.2-201ENST00000566263 604 ntBASIC0.11□□□□□ -2.39
CPSF4LA6NMK7 MIR3169-201ENST00000578032 83 ntBASIC0.11□□□□□ -2.39
CPSF4LA6NMK7 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC0.11□□□□□ -2.39
CPSF4LA6NMK7 AC017083.3-201ENST00000609955 700 ntBASIC0.11□□□□□ -2.39
CPSF4LA6NMK7 AC138627.2-201ENST00000624202 601 ntBASIC0.11□□□□□ -2.39
CPSF4LA6NMK7 AC106858.1-201ENST00000637497 429 ntBASIC0.11□□□□□ -2.39
CPSF4LA6NMK7 MTCO1P23-201ENST00000415223 1526 ntBASIC0.11□□□□□ -2.39
CPSF4LA6NMK7 GDI2P1-201ENST00000429312 1336 ntBASIC0.11□□□□□ -2.39
CPSF4LA6NMK7 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
CPSF4LA6NMK7 SNORA51.6-201ENST00000384151 125 ntBASIC0.1□□□□□ -2.39
CPSF4LA6NMK7 AC119751.3-201ENST00000399720 670 ntBASIC0.1□□□□□ -2.39
CPSF4LA6NMK7 AL356776.1-201ENST00000406574 447 ntBASIC0.1□□□□□ -2.39
CPSF4LA6NMK7 RNA5SP511-201ENST00000410487 115 ntBASIC0.1□□□□□ -2.39
CPSF4LA6NMK7 RNU2-70P-201ENST00000410718 179 ntBASIC0.1□□□□□ -2.39
CPSF4LA6NMK7 RNU6-233P-201ENST00000410845 141 ntBASIC0.1□□□□□ -2.39
CPSF4LA6NMK7 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
CPSF4LA6NMK7 AL589872.1-201ENST00000426602 288 ntBASIC0.1□□□□□ -2.39
CPSF4LA6NMK7 MTCO2P12-201ENST00000427426 682 ntBASIC0.1□□□□□ -2.39
CPSF4LA6NMK7 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.1□□□□□ -2.39
CPSF4LA6NMK7 MOB1AP2-201ENST00000446060 614 ntBASIC0.1□□□□□ -2.39
CPSF4LA6NMK7 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.1□□□□□ -2.39
CPSF4LA6NMK7 AL353718.1-201ENST00000451028 517 ntBASIC0.1□□□□□ -2.39
CPSF4LA6NMK7 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
CPSF4LA6NMK7 MTCO3P2-201ENST00000457365 171 ntBASIC0.1□□□□□ -2.39
CPSF4LA6NMK7 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.1□□□□□ -2.39
CPSF4LA6NMK7 RNU6-678P-201ENST00000516832 109 ntBASIC0.1□□□□□ -2.39
CPSF4LA6NMK7 RNU6-586P-201ENST00000517265 104 ntBASIC0.1□□□□□ -2.39
CPSF4LA6NMK7 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.1□□□□□ -2.39
CPSF4LA6NMK7 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.1□□□□□ -2.39
CPSF4LA6NMK7 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.1□□□□□ -2.39
CPSF4LA6NMK7 MIR3664-201ENST00000579074 99 ntBASIC0.1□□□□□ -2.39
CPSF4LA6NMK7 RPL30P11-203ENST00000598995 310 ntBASIC0.1□□□□□ -2.39
CPSF4LA6NMK7 SUMO2P14-201ENST00000604488 293 ntBASIC0.1□□□□□ -2.39
CPSF4LA6NMK7 AL355802.4-201ENST00000607635 548 ntBASIC0.1□□□□□ -2.39
CPSF4LA6NMK7 AL365434.2-201ENST00000607979 234 ntBASIC0.1□□□□□ -2.39
CPSF4LA6NMK7 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.1□□□□□ -2.39
CPSF4LA6NMK7 AC068647.2-201ENST00000637380 353 ntBASIC0.1□□□□□ -2.39
CPSF4LA6NMK7 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.1□□□□□ -2.39
CPSF4LA6NMK7 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.1□□□□□ -2.39
CPSF4LA6NMK7 RNU6-37P-201ENST00000362692 107 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms