Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 PIGFP3-201ENST00000441918 722 ntBASIC3.14□□□□□ -1.91
CGB1A6NKQ9 RN7SL860P-201ENST00000473738 223 ntBASIC3.14□□□□□ -1.91
CGB1A6NKQ9 AL160314.1-201ENST00000490836 438 ntBASIC3.14□□□□□ -1.91
CGB1A6NKQ9 AL132838.2-201ENST00000492041 314 ntBASIC3.14□□□□□ -1.91
CGB1A6NKQ9 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.14□□□□□ -1.91
CGB1A6NKQ9 AC006445.2-201ENST00000510061 472 ntBASIC3.14□□□□□ -1.91
CGB1A6NKQ9 RNU6-789P-201ENST00000517105 102 ntBASIC3.14□□□□□ -1.91
CGB1A6NKQ9 AC091144.1-201ENST00000519573 138 ntBASIC3.14□□□□□ -1.91
CGB1A6NKQ9 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.14□□□□□ -1.91
CGB1A6NKQ9 TRAV37-201ENST00000553906 342 ntBASIC3.14□□□□□ -1.91
CGB1A6NKQ9 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
CGB1A6NKQ9 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.14□□□□□ -1.91
CGB1A6NKQ9 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.14□□□□□ -1.91
CGB1A6NKQ9 AMZ2P1-203ENST00000565833 850 ntBASIC3.14□□□□□ -1.91
CGB1A6NKQ9 MIR5696-201ENST00000578474 85 ntBASIC3.14□□□□□ -1.91
CGB1A6NKQ9 HSPE1P7-201ENST00000604681 321 ntBASIC3.14□□□□□ -1.91
CGB1A6NKQ9 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.14□□□□□ -1.91
CGB1A6NKQ9 AC004852.3-201ENST00000614131 326 ntBASIC3.14□□□□□ -1.91
CGB1A6NKQ9 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.14□□□□□ -1.91
CGB1A6NKQ9 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.14□□□□□ -1.91
CGB1A6NKQ9 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CGB1A6NKQ9 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
CGB1A6NKQ9 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CGB1A6NKQ9 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CGB1A6NKQ9 Y_RNA.33-201ENST00000362591 102 ntBASIC3.13□□□□□ -1.91
CGB1A6NKQ9 RNU6-595P-201ENST00000363944 107 ntBASIC3.13□□□□□ -1.91
CGB1A6NKQ9 MIR521-1-201ENST00000384902 87 ntBASIC3.13□□□□□ -1.91
CGB1A6NKQ9 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.13□□□□□ -1.91
CGB1A6NKQ9 Y_RNA.592-201ENST00000410274 109 ntBASIC3.13□□□□□ -1.91
CGB1A6NKQ9 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.13□□□□□ -1.91
CGB1A6NKQ9 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.13□□□□□ -1.91
CGB1A6NKQ9 PIGPP3-201ENST00000425307 415 ntBASIC3.13□□□□□ -1.91
CGB1A6NKQ9 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CGB1A6NKQ9 AL159987.2-201ENST00000432754 307 ntBASIC3.13□□□□□ -1.91
CGB1A6NKQ9 AL512844.2-201ENST00000433990 593 ntBASIC3.13□□□□□ -1.91
CGB1A6NKQ9 AC004383.1-201ENST00000438135 289 ntBASIC3.13□□□□□ -1.91
CGB1A6NKQ9 RPEP5-201ENST00000441137 268 ntBASIC3.13□□□□□ -1.91
CGB1A6NKQ9 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.13□□□□□ -1.91
CGB1A6NKQ9 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.13□□□□□ -1.91
CGB1A6NKQ9 BTF3L4P4-201ENST00000506381 449 ntBASIC3.13□□□□□ -1.91
CGB1A6NKQ9 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.13□□□□□ -1.91
CGB1A6NKQ9 RNU6-406P-201ENST00000516470 107 ntBASIC3.13□□□□□ -1.91
CGB1A6NKQ9 SNORD59.2-201ENST00000516873 68 ntBASIC3.13□□□□□ -1.91
CGB1A6NKQ9 AC011602.1-201ENST00000546484 331 ntBASIC3.13□□□□□ -1.91
CGB1A6NKQ9 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.13□□□□□ -1.91
CGB1A6NKQ9 AC025884.1-201ENST00000556034 378 ntBASIC3.13□□□□□ -1.91
CGB1A6NKQ9 AC023575.1-201ENST00000580510 358 ntBASIC3.13□□□□□ -1.91
CGB1A6NKQ9 MIR3939-201ENST00000582614 106 ntBASIC3.13□□□□□ -1.91
CGB1A6NKQ9 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.13□□□□□ -1.91
CGB1A6NKQ9 AL591424.2-201ENST00000617023 128 ntBASIC3.13□□□□□ -1.91
CGB1A6NKQ9 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CGB1A6NKQ9 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.13□□□□□ -1.91
CGB1A6NKQ9 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.13□□□□□ -1.91
CGB1A6NKQ9 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CGB1A6NKQ9 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.13□□□□□ -1.91
CGB1A6NKQ9 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.13□□□□□ -1.91
CGB1A6NKQ9 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.13□□□□□ -1.91
CGB1A6NKQ9 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CGB1A6NKQ9 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CGB1A6NKQ9 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CGB1A6NKQ9 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CGB1A6NKQ9 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CGB1A6NKQ9 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CGB1A6NKQ9 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CGB1A6NKQ9 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CGB1A6NKQ9 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.12□□□□□ -1.91
CGB1A6NKQ9 RNU6-512P-201ENST00000364438 103 ntBASIC3.12□□□□□ -1.91
CGB1A6NKQ9 SNORA56-201ENST00000383966 129 ntBASIC3.12□□□□□ -1.91
CGB1A6NKQ9 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CGB1A6NKQ9 RNU2-25P-201ENST00000411041 191 ntBASIC3.12□□□□□ -1.91
CGB1A6NKQ9 RPL21P38-201ENST00000418090 167 ntBASIC3.12□□□□□ -1.91
CGB1A6NKQ9 AC096920.1-201ENST00000423991 241 ntBASIC3.12□□□□□ -1.91
CGB1A6NKQ9 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.12□□□□□ -1.91
CGB1A6NKQ9 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.12□□□□□ -1.91
CGB1A6NKQ9 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.12□□□□□ -1.91
CGB1A6NKQ9 RNA5SP179-201ENST00000517284 121 ntBASIC3.12□□□□□ -1.91
CGB1A6NKQ9 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.12□□□□□ -1.91
CGB1A6NKQ9 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.12□□□□□ -1.91
CGB1A6NKQ9 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CGB1A6NKQ9 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.12□□□□□ -1.91
CGB1A6NKQ9 AC053481.4-201ENST00000583164 216 ntBASIC3.12□□□□□ -1.91
CGB1A6NKQ9 AC009314.1-201ENST00000603871 304 ntBASIC3.12□□□□□ -1.91
CGB1A6NKQ9 AC009779.6-201ENST00000603972 165 ntBASIC3.12□□□□□ -1.91
CGB1A6NKQ9 AC091167.4-201ENST00000605079 184 ntBASIC3.12□□□□□ -1.91
CGB1A6NKQ9 MIR8076-201ENST00000611401 83 ntBASIC3.12□□□□□ -1.91
CGB1A6NKQ9 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.12□□□□□ -1.91
CGB1A6NKQ9 MIR8058-201ENST00000615737 89 ntBASIC3.12□□□□□ -1.91
CGB1A6NKQ9 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.12□□□□□ -1.91
CGB1A6NKQ9 AC243829.7-201ENST00000633081 225 ntBASIC3.12□□□□□ -1.91
CGB1A6NKQ9 U2.22-201ENST00000636441 106 ntBASIC3.12□□□□□ -1.91
CGB1A6NKQ9 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CGB1A6NKQ9 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.12□□□□□ -1.91
CGB1A6NKQ9 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.11□□□□□ -1.91
CGB1A6NKQ9 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CGB1A6NKQ9 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.11□□□□□ -1.91
CGB1A6NKQ9 MIR412-201ENST00000362142 91 ntBASIC3.11□□□□□ -1.91
CGB1A6NKQ9 MIR335-201ENST00000362173 94 ntBASIC3.11□□□□□ -1.91
CGB1A6NKQ9 Y_RNA.105-201ENST00000363182 111 ntBASIC3.11□□□□□ -1.91
CGB1A6NKQ9 RNU6-1167P-201ENST00000363227 94 ntBASIC3.11□□□□□ -1.91
CGB1A6NKQ9 SNORD27-201ENST00000363981 72 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms