Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.52□□□□□ -2.33
TCRBV3S1A0A5B6 AC253576.2-201ENST00000618815 580 ntBASIC0.52□□□□□ -2.33
TCRBV3S1A0A5B6 MIR6767-201ENST00000637302 66 ntBASIC0.52□□□□□ -2.33
TCRBV3S1A0A5B6 FARSBP1-201ENST00000435808 1778 ntBASIC0.52□□□□□ -2.33
TCRBV3S1A0A5B6 AC018630.2-201ENST00000534866 2403 ntBASIC0.52□□□□□ -2.33
TCRBV3S1A0A5B6 SNORD114-19-201ENST00000363072 75 ntBASIC0.51□□□□□ -2.33
TCRBV3S1A0A5B6 Y_RNA.99-201ENST00000363138 105 ntBASIC0.51□□□□□ -2.33
TCRBV3S1A0A5B6 RNU6-23P-201ENST00000363283 107 ntBASIC0.51□□□□□ -2.33
TCRBV3S1A0A5B6 SNORD114-6-201ENST00000364393 72 ntBASIC0.51□□□□□ -2.33
TCRBV3S1A0A5B6 Y_RNA.327-201ENST00000365201 102 ntBASIC0.51□□□□□ -2.33
TCRBV3S1A0A5B6 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.51□□□□□ -2.33
TCRBV3S1A0A5B6 RPL23AP32-201ENST00000395315 459 ntBASIC0.51□□□□□ -2.33
TCRBV3S1A0A5B6 HMGN1P14-201ENST00000412459 517 ntBASIC0.51□□□□□ -2.33
TCRBV3S1A0A5B6 AL161935.2-201ENST00000414627 60 ntBASIC0.51□□□□□ -2.33
TCRBV3S1A0A5B6 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.51□□□□□ -2.33
TCRBV3S1A0A5B6 AL590623.1-201ENST00000427864 105 ntBASIC0.51□□□□□ -2.33
TCRBV3S1A0A5B6 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.51□□□□□ -2.33
TCRBV3S1A0A5B6 AL096829.2-201ENST00000446582 742 ntBASIC0.51□□□□□ -2.33
TCRBV3S1A0A5B6 FDX1P2-201ENST00000450769 375 ntBASIC0.51□□□□□ -2.33
TCRBV3S1A0A5B6 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.51□□□□□ -2.33
TCRBV3S1A0A5B6 AC023194.1-201ENST00000493084 308 ntBASIC0.51□□□□□ -2.33
TCRBV3S1A0A5B6 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.51□□□□□ -2.33
TCRBV3S1A0A5B6 MTCYBP40-201ENST00000509390 1135 ntBASIC0.51□□□□□ -2.33
TCRBV3S1A0A5B6 AC093259.1-201ENST00000509755 300 ntBASIC0.51□□□□□ -2.33
TCRBV3S1A0A5B6 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC0.51□□□□□ -2.33
TCRBV3S1A0A5B6 RNU6-1261P-201ENST00000517194 104 ntBASIC0.51□□□□□ -2.33
TCRBV3S1A0A5B6 DEFB108E-201ENST00000524692 240 ntBASIC0.51□□□□□ -2.33
TCRBV3S1A0A5B6 AL356057.1-201ENST00000533798 831 ntBASIC0.51□□□□□ -2.33
TCRBV3S1A0A5B6 AC004812.1-201ENST00000540773 146 ntBASIC0.51□□□□□ -2.33
TCRBV3S1A0A5B6 AC011604.1-201ENST00000545978 196 ntBASIC0.51□□□□□ -2.33
TCRBV3S1A0A5B6 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.51□□□□□ -2.33
TCRBV3S1A0A5B6 ZNF971P-201ENST00000562068 1249 ntBASIC0.51□□□□□ -2.33
TCRBV3S1A0A5B6 AC015688.6-201ENST00000577737 104 ntBASIC0.51□□□□□ -2.33
TCRBV3S1A0A5B6 MIR3937-201ENST00000580135 106 ntBASIC0.51□□□□□ -2.33
TCRBV3S1A0A5B6 AC008088.1-201ENST00000580993 280 ntBASIC0.51□□□□□ -2.33
TCRBV3S1A0A5B6 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
TCRBV3S1A0A5B6 MIR8065-201ENST00000620577 100 ntBASIC0.51□□□□□ -2.33
TCRBV3S1A0A5B6 AC009268.2-201ENST00000621925 457 ntBASIC0.51□□□□□ -2.33
TCRBV3S1A0A5B6 SNORA18.2-201ENST00000383865 132 ntBASIC0.5□□□□□ -2.33
TCRBV3S1A0A5B6 SNORA25-201ENST00000384384 134 ntBASIC0.5□□□□□ -2.33
TCRBV3S1A0A5B6 MIR186-201ENST00000384988 86 ntBASIC0.5□□□□□ -2.33
TCRBV3S1A0A5B6 MRPL35P1-201ENST00000404272 572 ntBASIC0.5□□□□□ -2.33
TCRBV3S1A0A5B6 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.5□□□□□ -2.33
TCRBV3S1A0A5B6 BRK1P2-201ENST00000442875 223 ntBASIC0.5□□□□□ -2.33
TCRBV3S1A0A5B6 MTCO3P45-201ENST00000443036 613 ntBASIC0.5□□□□□ -2.33
TCRBV3S1A0A5B6 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.5□□□□□ -2.33
TCRBV3S1A0A5B6 MTND5P8-201ENST00000449817 1083 ntBASIC0.5□□□□□ -2.33
TCRBV3S1A0A5B6 snoU13.8-201ENST00000458890 104 ntBASIC0.5□□□□□ -2.33
TCRBV3S1A0A5B6 RNU6-965P-201ENST00000516721 96 ntBASIC0.5□□□□□ -2.33
TCRBV3S1A0A5B6 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.5□□□□□ -2.33
TCRBV3S1A0A5B6 AC136628.3-201ENST00000521868 290 ntBASIC0.5□□□□□ -2.33
TCRBV3S1A0A5B6 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC0.5□□□□□ -2.33
TCRBV3S1A0A5B6 AC018630.3-201ENST00000542637 96 ntBASIC0.5□□□□□ -2.33
TCRBV3S1A0A5B6 ZKSCAN7P1-201ENST00000543668 673 ntBASIC0.5□□□□□ -2.33
TCRBV3S1A0A5B6 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.5□□□□□ -2.33
TCRBV3S1A0A5B6 AC073410.2-201ENST00000603240 332 ntBASIC0.5□□□□□ -2.33
TCRBV3S1A0A5B6 DPPA3P3-201ENST00000603842 430 ntBASIC0.5□□□□□ -2.33
TCRBV3S1A0A5B6 BX284668.6-201ENST00000606899 438 ntBASIC0.5□□□□□ -2.33
TCRBV3S1A0A5B6 AC090970.3-201ENST00000612566 866 ntBASIC0.5□□□□□ -2.33
TCRBV3S1A0A5B6 U6.99-201ENST00000637524 83 ntBASIC0.5□□□□□ -2.33
TCRBV3S1A0A5B6 RNU6-1010P-201ENST00000362757 107 ntBASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 RNU6-216P-201ENST00000363282 104 ntBASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 RNU6-898P-201ENST00000365627 104 ntBASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 RNU6-114P-201ENST00000384704 105 ntBASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 RPL17P50-201ENST00000396131 546 ntBASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 MTND1P21-201ENST00000412991 285 ntBASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 TPMTP2-201ENST00000414372 726 ntBASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 MTND4LP14-201ENST00000429447 288 ntBASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 GTF2IP3-201ENST00000433887 494 ntBASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 CALM1P1-201ENST00000442082 433 ntBASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 snoU13.23-201ENST00000458863 104 ntBASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 AC108729.2-201ENST00000476543 840 ntBASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 AC110760.3-202ENST00000515177 371 ntBASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 TRAV32-201ENST00000553993 340 ntBASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 AP001004.1-201ENST00000582468 324 ntBASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 AC012065.4-201ENST00000602445 679 ntBASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 MZT1P2-201ENST00000604387 248 ntBASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 AC112220.3-201ENST00000605502 502 ntBASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 AC096772.1-201ENST00000609146 564 ntBASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 AL590240.4-201ENST00000616908 390 ntBASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 AL353997.5-201ENST00000618886 171 ntBASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 MIR1248-201ENST00000629190 106 ntBASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 AL133216.2-202ENST00000634512 349 ntBASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 AC100821.1-201ENST00000523153 2479 ntBASIC0.49□□□□□ -2.33
TCRBV3S1A0A5B6 MTND4P16-201ENST00000466108 1367 ntBASIC0.48□□□□□ -2.33
TCRBV3S1A0A5B6 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
TCRBV3S1A0A5B6 RNU6-529P-201ENST00000363383 104 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms